10 20 30 40 50 60 70 80 1UT7 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION REGULATION 04-DEC-03 1UT7
TITLE STRUCTURE OF THE CONSERVED DOMAIN OF ANAC, A MEMBER OF THE TITLE 2 NAC FAMILY OF TRANSCRIPTION FACTORS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: NO APICAL MERISTEM PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: DNA-BINDING NAC DOMAIN, RESIDUES 1-168; COMPND 5 SYNONYM: NAM, ANAC, ABSCISIC ACID RESPONSIVE NAC, COMPND 6 DICYANOAURATE DERIVATIVE; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: DICYANOAURATE DERIVATIVE
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS TRANSCRIPTION REGULATION, TRANSCRIPTION, TRANSCRIPTION KEYWDS 2 FACTOR, DNA BINDING, ABSCISIC ACID RESPONSE, ARABIDOPSIS KEYWDS 3 THALIANA, CRYSTAL STRUCTURE, NAC DOMAIN
EXPDTA X-RAY DIFFRACTION
AUTHOR H.A.ERNST,A.N.OLSEN,K.SKRIVER,S.LARSEN,L.LO LEGGIO
REVDAT 2 24-FEB-09 1UT7 1 VERSN REVDAT 1 19-MAR-04 1UT7 0
JRNL AUTH H.A.ERNST,A.N.OLSEN,K.SKRIVER,S.LARSEN,L.LO LEGGIO JRNL TITL STRUCTURE OF THE CONSERVED DOMAIN OF ANAC, A JRNL TITL 2 MEMBER OF THE NAC FAMILY OF TRANSCRIPTION FACTORS JRNL REF EMBO REP. V. 5 297 2004 JRNL REFN ISSN 1469-221X JRNL PMID 15083810 JRNL DOI 10.1038/SJ.EMBOR.7400093
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.OLSEN,H.ERNST,L.LO LEGGIO,E.JOHANSSON,S.LARSEN, REMARK 1 AUTH 2 K.SKRIVER REMARK 1 TITL PRELIMINARY CRYSTALLOGRAPHIC ANALYSIS OF THE NAC REMARK 1 TITL 2 DOMAIN OF ANAC, A MEMBER OF THE PLANT-SPECIFIC NAC REMARK 1 TITL 3 TRANSCRIPTION FACTOR FAMILY REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 60 112 2004 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 14684901
REMARK 2 REMARK 2 RESOLUTION. 1.9 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 28277 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1505 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1933 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2466 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 183 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.60000 REMARK 3 B22 (A**2) : -0.64000 REMARK 3 B33 (A**2) : 1.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.146 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.517 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2536 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2273 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3423 ; 1.407 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5315 ; 1.306 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 290 ; 6.685 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 353 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2727 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 547 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 381 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2437 ; 0.249 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1506 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 138 ; 0.168 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.182 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 115 ; 0.298 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.140 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1479 ; 1.033 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2388 ; 1.940 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1057 ; 2.308 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1035 ; 3.849 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 30 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 16 A 20 4 REMARK 3 1 B 16 B 20 4 REMARK 3 2 A 21 A 32 1 REMARK 3 2 B 21 B 32 1 REMARK 3 3 A 34 A 35 6 REMARK 3 3 B 34 B 35 6 REMARK 3 4 A 46 A 47 4 REMARK 3 4 B 46 B 47 4 REMARK 3 5 A 48 A 48 1 REMARK 3 5 B 48 B 48 1 REMARK 3 6 A 49 A 49 3 REMARK 3 6 B 49 B 49 3 REMARK 3 7 A 50 A 50 1 REMARK 3 7 B 50 B 50 1 REMARK 3 8 A 51 A 51 2 REMARK 3 8 B 51 B 51 2 REMARK 3 9 A 52 A 57 1 REMARK 3 9 B 52 B 57 1 REMARK 3 10 A 58 A 58 5 REMARK 3 10 B 58 B 58 5 REMARK 3 11 A 60 A 60 1 REMARK 3 11 B 60 B 60 1 REMARK 3 12 A 61 A 61 2 REMARK 3 12 B 61 B 61 2 REMARK 3 13 A 62 A 69 4 REMARK 3 13 B 62 B 69 4 REMARK 3 14 A 70 A 76 1 REMARK 3 14 B 70 B 76 1 REMARK 3 15 A 86 A 87 4 REMARK 3 15 B 86 B 87 4 REMARK 3 16 A 88 A 103 1 REMARK 3 16 B 88 B 103 1 REMARK 3 17 A 104 A 104 3 REMARK 3 17 B 104 B 104 3 REMARK 3 18 A 105 A 109 1 REMARK 3 18 B 105 B 109 1 REMARK 3 19 A 110 A 110 6 REMARK 3 19 B 110 B 110 6 REMARK 3 20 A 111 A 117 1 REMARK 3 20 B 111 B 117 1 REMARK 3 21 A 118 A 118 3 REMARK 3 21 B 118 B 118 3 REMARK 3 22 A 119 A 120 1 REMARK 3 22 B 119 B 120 1 REMARK 3 23 A 121 A 121 3 REMARK 3 23 B 121 B 121 3 REMARK 3 24 A 122 A 134 1 REMARK 3 24 B 122 B 134 1 REMARK 3 25 A 135 A 135 3 REMARK 3 25 B 135 B 135 3 REMARK 3 26 A 136 A 139 1 REMARK 3 26 B 136 B 139 1 REMARK 3 27 A 140 A 140 4 REMARK 3 27 B 140 B 140 4 REMARK 3 28 A 153 A 155 2 REMARK 3 28 B 153 B 155 2 REMARK 3 29 A 157 A 162 1 REMARK 3 29 B 157 B 162 1 REMARK 3 30 A 163 A 163 3 REMARK 3 30 B 163 B 163 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1361 ; 0.05 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 323 ; 0.53 ; 0.50 REMARK 3 LOOSE POSITIONAL 1 A (A): 127 ; 0.89 ; 5.00 REMARK 3 TIGHT THERMAL 1 A (A**2): 1361 ; 0.21 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 323 ; 0.75 ; 2.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 127 ; 1.10 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 1UT7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-DEC-03. REMARK 100 THE PDBE ID CODE IS EBI-14109.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26725 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.30700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.4 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.18250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.25750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.65100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.25750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.18250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.65100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 5 REMARK 465 THR A 6 REMARK 465 ASP A 7 REMARK 465 PRO A 8 REMARK 465 LYS A 79 REMARK 465 TYR A 80 REMARK 465 PRO A 81 REMARK 465 ASN A 82 REMARK 465 GLY A 83 REMARK 465 SER A 84 REMARK 465 ARG A 85 REMARK 465 ARG A 144 REMARK 465 ARG A 145 REMARK 465 ASN A 146 REMARK 465 GLY A 147 REMARK 465 SER A 148 REMARK 465 THR A 149 REMARK 465 LYS A 150 REMARK 465 LEU A 151 REMARK 465 SER A 164 REMARK 465 SER A 165 REMARK 465 ALA A 166 REMARK 465 GLN A 167 REMARK 465 LYS A 168 REMARK 465 ARG B 78 REMARK 465 LYS B 79 REMARK 465 TYR B 80 REMARK 465 PRO B 81 REMARK 465 ASN B 82 REMARK 465 GLY B 83 REMARK 465 SER B 84 REMARK 465 ARG B 85 REMARK 465 ARG B 144 REMARK 465 ARG B 145 REMARK 465 ASN B 146 REMARK 465 GLY B 147 REMARK 465 SER B 148 REMARK 465 THR B 149 REMARK 465 LYS B 150 REMARK 465 LEU B 151 REMARK 465 SER B 164 REMARK 465 SER B 165 REMARK 465 ALA B 166 REMARK 465 GLN B 167 REMARK 465 LYS B 168
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 31 -70.88 -114.04 REMARK 500 PRO A 125 38.11 -94.54 REMARK 500 PRO B 125 37.86 -95.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 13 LEU A 14 -146.33 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AU B 1164 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AU A1164 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AU A1165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AU B1164
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UT4 RELATED DB: PDB REMARK 900 STRUCTURE OF THE CONSERVED DOMAIN OF ANAC, REMARK 900 A MEMBER OF THE NAC FAMILY OF REMARK 900 TRANSCRIPTION FACTORS
REMARK 999 REMARK 999 SEQUENCE REMARK 999 NP_175697 (1-168) + THREE EXTRA RES AT THE N-TERM
DBREF 1UT7 A -3 -1 PDB 1UT7 1UT7 -3 -1 DBREF 1UT7 A 1 168 UNP Q9C932 Q9C932 1 168 DBREF 1UT7 B -3 -1 PDB 1UT7 1UT7 -3 -1 DBREF 1UT7 B 1 168 UNP Q9C932 Q9C932 1 168
SEQRES 1 A 171 GLY SER HIS MET GLY ILE GLN GLU THR ASP PRO LEU THR SEQRES 2 A 171 GLN LEU SER LEU PRO PRO GLY PHE ARG PHE TYR PRO THR SEQRES 3 A 171 ASP GLU GLU LEU MET VAL GLN TYR LEU CYS ARG LYS ALA SEQRES 4 A 171 ALA GLY TYR ASP PHE SER LEU GLN LEU ILE ALA GLU ILE SEQRES 5 A 171 ASP LEU TYR LYS PHE ASP PRO TRP VAL LEU PRO ASN LYS SEQRES 6 A 171 ALA LEU PHE GLY GLU LYS GLU TRP TYR PHE PHE SER PRO SEQRES 7 A 171 ARG ASP ARG LYS TYR PRO ASN GLY SER ARG PRO ASN ARG SEQRES 8 A 171 VAL ALA GLY SER GLY TYR TRP LYS ALA THR GLY THR ASP SEQRES 9 A 171 LYS ILE ILE SER THR GLU GLY GLN ARG VAL GLY ILE LYS SEQRES 10 A 171 LYS ALA LEU VAL PHE TYR ILE GLY LYS ALA PRO LYS GLY SEQRES 11 A 171 THR LYS THR ASN TRP ILE MET HIS GLU TYR ARG LEU ILE SEQRES 12 A 171 GLU PRO SER ARG ARG ASN GLY SER THR LYS LEU ASP ASP SEQRES 13 A 171 TRP VAL LEU CYS ARG ILE TYR LYS LYS GLN SER SER ALA SEQRES 14 A 171 GLN LYS SEQRES 1 B 171 GLY SER HIS MET GLY ILE GLN GLU THR ASP PRO LEU THR SEQRES 2 B 171 GLN LEU SER LEU PRO PRO GLY PHE ARG PHE TYR PRO THR SEQRES 3 B 171 ASP GLU GLU LEU MET VAL GLN TYR LEU CYS ARG LYS ALA SEQRES 4 B 171 ALA GLY TYR ASP PHE SER LEU GLN LEU ILE ALA GLU ILE SEQRES 5 B 171 ASP LEU TYR LYS PHE ASP PRO TRP VAL LEU PRO ASN LYS SEQRES 6 B 171 ALA LEU PHE GLY GLU LYS GLU TRP TYR PHE PHE SER PRO SEQRES 7 B 171 ARG ASP ARG LYS TYR PRO ASN GLY SER ARG PRO ASN ARG SEQRES 8 B 171 VAL ALA GLY SER GLY TYR TRP LYS ALA THR GLY THR ASP SEQRES 9 B 171 LYS ILE ILE SER THR GLU GLY GLN ARG VAL GLY ILE LYS SEQRES 10 B 171 LYS ALA LEU VAL PHE TYR ILE GLY LYS ALA PRO LYS GLY SEQRES 11 B 171 THR LYS THR ASN TRP ILE MET HIS GLU TYR ARG LEU ILE SEQRES 12 B 171 GLU PRO SER ARG ARG ASN GLY SER THR LYS LEU ASP ASP SEQRES 13 B 171 TRP VAL LEU CYS ARG ILE TYR LYS LYS GLN SER SER ALA SEQRES 14 B 171 GLN LYS
HET AU A1164 1 HET AU A1165 2 HET AU B1164 1
HETNAM AU GOLD ION
FORMUL 3 AU 3(AU 1+) FORMUL 6 HOH *183(H2 O1)
HELIX 1 1 THR A 23 TYR A 31 1 9 HELIX 2 2 TYR A 31 ALA A 37 1 7 HELIX 3 3 ASP A 50 PHE A 54 5 5 HELIX 4 4 ASP A 55 TRP A 57 5 3 HELIX 5 5 VAL A 58 ALA A 63 1 6 HELIX 6 6 ASP B 7 LEU B 12 1 6 HELIX 7 7 THR B 23 GLN B 30 1 8 HELIX 8 8 TYR B 31 GLY B 38 1 8 HELIX 9 9 TYR B 39 ILE B 46 1 8 HELIX 10 10 ASP B 50 PHE B 54 5 5 HELIX 11 11 ASP B 55 TRP B 57 5 3 HELIX 12 12 VAL B 58 ALA B 63 1 6
SHEET 1 AA 2 PHE A 18 PHE A 20 0 SHEET 2 AA 2 PHE B 18 PHE B 20 -1 O ARG B 19 N ARG A 19 SHEET 1 AB 7 ALA A 47 GLU A 48 0 SHEET 2 AB 7 GLU A 69 PRO A 75 1 O TYR A 71 N ALA A 47 SHEET 3 AB 7 TRP A 154 LYS A 161 -1 O VAL A 155 N SER A 74 SHEET 4 AB 7 THR A 128 LEU A 139 -1 O ILE A 133 N TYR A 160 SHEET 5 AB 7 GLN A 109 ILE A 121 -1 O ILE A 113 N ARG A 138 SHEET 6 AB 7 GLY A 93 THR A 106 -1 O TYR A 94 N TYR A 120 SHEET 7 AB 7 ARG A 88 ALA A 90 -1 O ARG A 88 N TRP A 95 SHEET 1 BA 7 ALA B 47 GLU B 48 0 SHEET 2 BA 7 GLU B 69 PRO B 75 1 O TYR B 71 N ALA B 47 SHEET 3 BA 7 TRP B 154 LYS B 161 -1 O VAL B 155 N SER B 74 SHEET 4 BA 7 THR B 128 LEU B 139 -1 O ILE B 133 N TYR B 160 SHEET 5 BA 7 GLN B 109 ILE B 121 -1 O ILE B 113 N ARG B 138 SHEET 6 BA 7 GLY B 93 THR B 106 -1 O TYR B 94 N TYR B 120 SHEET 7 BA 7 ARG B 88 ALA B 90 -1 O ARG B 88 N TRP B 95
CISPEP 1 ALA A 124 PRO A 125 0 -3.17 CISPEP 2 ALA B 124 PRO B 125 0 -3.40
SITE 1 AC1 2 LYS A 62 CYS B 33 SITE 1 AC1 1 PHE A 41 SITE 1 AC2 1 CYS A 33 SITE 1 AC3 2 LYS A 62 CYS B 33
CRYST1 62.365 75.302 80.515 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016035 0.000000 0.000000 0.00000
SCALE2 0.000000 0.013280 0.000000 0.00000
SCALE3 0.000000 0.000000 0.012420 0.00000
MTRIX1 1 -0.999310 0.035948 0.009284 60.92400 1
MTRIX2 1 0.034701 0.993250 -0.110700 3.07260 1
MTRIX3 1 -0.013201 -0.110300 -0.993810 86.02000 1