10 20 30 40 50 60 70 80 1ULH - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric Unit
HEADER LIGASE 12-SEP-03 1ULH
TITLE A SHORT PEPTIDE INSERTION CRUCIAL FOR ANGIOSTATIC ACTIVITY TITLE 2 OF HUMAN TRYPTOPHANYL-TRNA SYNTHETASE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRYPTOPHANYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 35-424; COMPND 5 SYNONYM: TRYPTOPHAN--TRNA LIGASE, TRPRS, IFP53, HWRS, MINI COMPND 6 TRPRS; COMPND 7 EC: 6.1.1.2; COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRPS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET26B
KEYWDS AMINOACYLATION, ANGIOSTATIC CYTOKINE, APOPTOSIS, RIKEN KEYWDS 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL KEYWDS 3 GENOMICS, LIGASE
EXPDTA X-RAY DIFFRACTION
AUTHOR Y.KISE,T.SENGOKU,R.ISHII,S.YOKOYAMA,S.G.PARK,S.W.LEE,S.KIM, AUTHOR 2 O.NUREKI,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI)
REVDAT 2 24-FEB-09 1ULH 1 VERSN REVDAT 1 03-FEB-04 1ULH 0
JRNL AUTH Y.KISE,S.W.LEE,S.G.PARK,S.FUKAI,T.SENGOKU,R.ISHII, JRNL AUTH 2 S.YOKOYAMA,S.KIM,O.NUREKI JRNL TITL A SHORT PEPTIDE INSERTION CRUCIAL FOR ANGIOSTATIC JRNL TITL 2 ACTIVITY OF HUMAN TRYPTOPHANYL-TRNA SYNTHETASE JRNL REF NAT.STRUCT.MOL.BIOL. V. 11 149 2004 JRNL REFN ISSN 1545-9993 JRNL PMID 14730354 JRNL DOI 10.1038/NSMB722
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1552705.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.7 REMARK 3 NUMBER OF REFLECTIONS : 38685 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1939 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.31 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.45 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5332 REMARK 3 BIN R VALUE (WORKING SET) : 0.3370 REMARK 3 BIN FREE R VALUE : 0.3600 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 265 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.022 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6011 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 477 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.24000 REMARK 3 B22 (A**2) : 10.46000 REMARK 3 B33 (A**2) : -1.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.08000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.41 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.45 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.021 REMARK 3 BOND ANGLES (DEGREES) : 1.80 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.15 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 36.65 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1ULH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-SEP-03. REMARK 100 THE RCSB ID CODE IS RCSB005958.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9799 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 106623 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.310 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.1 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.31 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 50.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.21500 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 10000, PH 5.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 68.01250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.30300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 68.01250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 48.30300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 35 REMARK 465 ASP A 36 REMARK 465 PHE A 37 REMARK 465 VAL A 38 REMARK 465 ASP A 39 REMARK 465 PRO A 40 REMARK 465 TRP A 41 REMARK 465 THR A 42 REMARK 465 VAL A 43 REMARK 465 GLN A 44 REMARK 465 THR A 45 REMARK 465 SER A 46 REMARK 465 SER A 47 REMARK 465 ALA A 48 REMARK 465 LYS A 49 REMARK 465 GLY A 50 REMARK 465 ILE A 51 REMARK 465 ASP A 52 REMARK 465 GLN A 300 REMARK 465 THR A 301 REMARK 465 LYS A 302 REMARK 465 MET A 303 REMARK 465 SER A 304 REMARK 465 ALA A 305 REMARK 465 SER A 306 REMARK 465 ASP A 307 REMARK 465 ASP B 335 REMARK 465 THR B 336 REMARK 465 ILE B 337 REMARK 465 GLU B 338 REMARK 465 GLU B 339 REMARK 465 HIS B 340 REMARK 465 ARG B 341 REMARK 465 GLN B 342 REMARK 465 PHE B 343 REMARK 465 PHE B 423 REMARK 465 GLN B 424
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 338 N - CA - C ANGL. DEV. = -16.7 DEGREES REMARK 500 GLY B 332 N - CA - C ANGL. DEV. = -17.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 66 -131.67 -100.19 REMARK 500 LYS A 67 11.57 -143.19 REMARK 500 GLN A 79 -139.65 -123.40 REMARK 500 ASN A 105 7.12 -69.11 REMARK 500 LYS A 106 38.28 72.66 REMARK 500 PRO A 117 75.02 -67.78 REMARK 500 SER A 119 -134.53 47.99 REMARK 500 GLU A 120 -165.92 -160.74 REMARK 500 ALA A 121 33.32 112.31 REMARK 500 HIS A 126 -6.61 -57.45 REMARK 500 ASN A 141 60.12 61.41 REMARK 500 LYS A 184 22.86 -146.85 REMARK 500 THR A 223 -158.99 -100.62 REMARK 500 ASN A 244 9.86 -66.42 REMARK 500 ILE A 249 -68.80 -90.47 REMARK 500 ARG A 251 -123.83 100.86 REMARK 500 ALA A 263 -172.50 -66.13 REMARK 500 LEU A 296 -78.14 -33.41 REMARK 500 THR A 317 -134.24 -65.92 REMARK 500 ASP A 335 -52.37 37.27 REMARK 500 ILE A 337 90.00 -29.41 REMARK 500 GLU A 339 47.25 -169.21 REMARK 500 HIS A 340 -17.99 -38.02 REMARK 500 ARG A 341 -9.24 -50.35 REMARK 500 GLN A 342 76.98 -163.14 REMARK 500 PHE A 343 -137.43 160.21 REMARK 500 CYS A 347 25.27 -77.22 REMARK 500 ILE A 395 -71.13 -55.90 REMARK 500 PRO A 416 106.85 -52.51 REMARK 500 ASP B 36 -75.06 41.74 REMARK 500 HIS B 82 151.46 -49.43 REMARK 500 ARG B 251 65.30 36.22 REMARK 500 THR B 254 -13.90 57.02 REMARK 500 ILE B 264 8.75 -64.22 REMARK 500 ALA B 299 33.93 -86.56 REMARK 500 ASP B 307 94.81 56.57 REMARK 500 ASN B 309 66.33 164.82 REMARK 500 LEU B 314 1.95 -64.93 REMARK 500 ASP B 348 1.57 -66.42 REMARK 500 VAL B 349 -5.05 -142.02 REMARK 500 GLU B 361 69.31 75.57 REMARK 500 ASP B 362 94.32 176.19 REMARK 500 LEU B 379 74.04 67.07 REMARK 500 THR B 380 -60.97 24.74 REMARK 500 LEU B 419 -122.47 82.74 REMARK 500 SER B 420 38.63 -157.58 REMARK 500 PHE B 421 12.52 50.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 112 0.07 SIDE_CHAIN REMARK 500 TYR B 201 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 501 DISTANCE = 5.06 ANGSTROMS REMARK 525 HOH B 534 DISTANCE = 5.60 ANGSTROMS REMARK 525 HOH A 554 DISTANCE = 5.21 ANGSTROMS REMARK 525 HOH B 581 DISTANCE = 5.79 ANGSTROMS REMARK 525 HOH A 587 DISTANCE = 6.92 ANGSTROMS REMARK 525 HOH A 594 DISTANCE = 5.65 ANGSTROMS REMARK 525 HOH A 613 DISTANCE = 5.64 ANGSTROMS REMARK 525 HOH B 620 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A 639 DISTANCE = 5.37 ANGSTROMS
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TRT001000324.1 RELATED DB: TARGETDB
DBREF 1ULH A 35 424 UNP P23381 SYW_HUMAN 82 471 DBREF 1ULH B 35 424 UNP P23381 SYW_HUMAN 82 471
SEQRES 1 A 390 GLU ASP PHE VAL ASP PRO TRP THR VAL GLN THR SER SER SEQRES 2 A 390 ALA LYS GLY ILE ASP TYR ASP LYS LEU ILE VAL ARG PHE SEQRES 3 A 390 GLY SER SER LYS ILE ASP LYS GLU LEU ILE ASN ARG ILE SEQRES 4 A 390 GLU ARG ALA THR GLY GLN ARG PRO HIS HIS PHE LEU ARG SEQRES 5 A 390 ARG GLY ILE PHE PHE SER HIS ARG ASP MET ASN GLN VAL SEQRES 6 A 390 LEU ASP ALA TYR GLU ASN LYS LYS PRO PHE TYR LEU TYR SEQRES 7 A 390 THR GLY ARG GLY PRO SER SER GLU ALA MET HIS VAL GLY SEQRES 8 A 390 HIS LEU ILE PRO PHE ILE PHE THR LYS TRP LEU GLN ASP SEQRES 9 A 390 VAL PHE ASN VAL PRO LEU VAL ILE GLN MET THR ASP ASP SEQRES 10 A 390 GLU LYS TYR LEU TRP LYS ASP LEU THR LEU ASP GLN ALA SEQRES 11 A 390 TYR SER TYR ALA VAL GLU ASN ALA LYS ASP ILE ILE ALA SEQRES 12 A 390 CYS GLY PHE ASP ILE ASN LYS THR PHE ILE PHE SER ASP SEQRES 13 A 390 LEU ASP TYR MET GLY MET SER SER GLY PHE TYR LYS ASN SEQRES 14 A 390 VAL VAL LYS ILE GLN LYS HIS VAL THR PHE ASN GLN VAL SEQRES 15 A 390 LYS GLY ILE PHE GLY PHE THR ASP SER ASP CYS ILE GLY SEQRES 16 A 390 LYS ILE SER PHE PRO ALA ILE GLN ALA ALA PRO SER PHE SEQRES 17 A 390 SER ASN SER PHE PRO GLN ILE PHE ARG ASP ARG THR ASP SEQRES 18 A 390 ILE GLN CYS LEU ILE PRO CYS ALA ILE ASP GLN ASP PRO SEQRES 19 A 390 TYR PHE ARG MET THR ARG ASP VAL ALA PRO ARG ILE GLY SEQRES 20 A 390 TYR PRO LYS PRO ALA LEU LEU HIS SER THR PHE PHE PRO SEQRES 21 A 390 ALA LEU GLN GLY ALA GLN THR LYS MET SER ALA SER ASP SEQRES 22 A 390 PRO ASN SER SER ILE PHE LEU THR ASP THR ALA LYS GLN SEQRES 23 A 390 ILE LYS THR LYS VAL ASN LYS HIS ALA PHE SER GLY GLY SEQRES 24 A 390 ARG ASP THR ILE GLU GLU HIS ARG GLN PHE GLY GLY ASN SEQRES 25 A 390 CYS ASP VAL ASP VAL SER PHE MET TYR LEU THR PHE PHE SEQRES 26 A 390 LEU GLU ASP ASP ASP LYS LEU GLU GLN ILE ARG LYS ASP SEQRES 27 A 390 TYR THR SER GLY ALA MET LEU THR GLY GLU LEU LYS LYS SEQRES 28 A 390 ALA LEU ILE GLU VAL LEU GLN PRO LEU ILE ALA GLU HIS SEQRES 29 A 390 GLN ALA ARG ARG LYS GLU VAL THR ASP GLU ILE VAL LYS SEQRES 30 A 390 GLU PHE MET THR PRO ARG LYS LEU SER PHE ASP PHE GLN SEQRES 1 B 390 GLU ASP PHE VAL ASP PRO TRP THR VAL GLN THR SER SER SEQRES 2 B 390 ALA LYS GLY ILE ASP TYR ASP LYS LEU ILE VAL ARG PHE SEQRES 3 B 390 GLY SER SER LYS ILE ASP LYS GLU LEU ILE ASN ARG ILE SEQRES 4 B 390 GLU ARG ALA THR GLY GLN ARG PRO HIS HIS PHE LEU ARG SEQRES 5 B 390 ARG GLY ILE PHE PHE SER HIS ARG ASP MET ASN GLN VAL SEQRES 6 B 390 LEU ASP ALA TYR GLU ASN LYS LYS PRO PHE TYR LEU TYR SEQRES 7 B 390 THR GLY ARG GLY PRO SER SER GLU ALA MET HIS VAL GLY SEQRES 8 B 390 HIS LEU ILE PRO PHE ILE PHE THR LYS TRP LEU GLN ASP SEQRES 9 B 390 VAL PHE ASN VAL PRO LEU VAL ILE GLN MET THR ASP ASP SEQRES 10 B 390 GLU LYS TYR LEU TRP LYS ASP LEU THR LEU ASP GLN ALA SEQRES 11 B 390 TYR SER TYR ALA VAL GLU ASN ALA LYS ASP ILE ILE ALA SEQRES 12 B 390 CYS GLY PHE ASP ILE ASN LYS THR PHE ILE PHE SER ASP SEQRES 13 B 390 LEU ASP TYR MET GLY MET SER SER GLY PHE TYR LYS ASN SEQRES 14 B 390 VAL VAL LYS ILE GLN LYS HIS VAL THR PHE ASN GLN VAL SEQRES 15 B 390 LYS GLY ILE PHE GLY PHE THR ASP SER ASP CYS ILE GLY SEQRES 16 B 390 LYS ILE SER PHE PRO ALA ILE GLN ALA ALA PRO SER PHE SEQRES 17 B 390 SER ASN SER PHE PRO GLN ILE PHE ARG ASP ARG THR ASP SEQRES 18 B 390 ILE GLN CYS LEU ILE PRO CYS ALA ILE ASP GLN ASP PRO SEQRES 19 B 390 TYR PHE ARG MET THR ARG ASP VAL ALA PRO ARG ILE GLY SEQRES 20 B 390 TYR PRO LYS PRO ALA LEU LEU HIS SER THR PHE PHE PRO SEQRES 21 B 390 ALA LEU GLN GLY ALA GLN THR LYS MET SER ALA SER ASP SEQRES 22 B 390 PRO ASN SER SER ILE PHE LEU THR ASP THR ALA LYS GLN SEQRES 23 B 390 ILE LYS THR LYS VAL ASN LYS HIS ALA PHE SER GLY GLY SEQRES 24 B 390 ARG ASP THR ILE GLU GLU HIS ARG GLN PHE GLY GLY ASN SEQRES 25 B 390 CYS ASP VAL ASP VAL SER PHE MET TYR LEU THR PHE PHE SEQRES 26 B 390 LEU GLU ASP ASP ASP LYS LEU GLU GLN ILE ARG LYS ASP SEQRES 27 B 390 TYR THR SER GLY ALA MET LEU THR GLY GLU LEU LYS LYS SEQRES 28 B 390 ALA LEU ILE GLU VAL LEU GLN PRO LEU ILE ALA GLU HIS SEQRES 29 B 390 GLN ALA ARG ARG LYS GLU VAL THR ASP GLU ILE VAL LYS SEQRES 30 B 390 GLU PHE MET THR PRO ARG LYS LEU SER PHE ASP PHE GLN
FORMUL 3 HOH *477(H2 O)
HELIX 1 1 TYR A 53 GLY A 61 1 9 HELIX 2 2 GLU A 68 GLY A 78 1 11 HELIX 3 3 HIS A 82 GLY A 88 1 7 HELIX 4 4 ASP A 95 ASN A 105 1 11 HELIX 5 5 HIS A 123 HIS A 126 5 4 HELIX 6 6 LEU A 127 ASN A 141 1 15 HELIX 7 7 THR A 149 LYS A 157 1 9 HELIX 8 8 THR A 160 CYS A 178 1 19 HELIX 9 9 ASP A 190 MET A 194 1 5 HELIX 10 10 GLY A 199 HIS A 210 1 12 HELIX 11 11 THR A 212 PHE A 220 1 9 HELIX 12 12 CYS A 227 PHE A 233 1 7 HELIX 13 13 PHE A 233 ALA A 239 1 7 HELIX 14 14 PRO A 240 PHE A 246 5 7 HELIX 15 15 GLN A 266 ILE A 280 1 15 HELIX 16 16 ALA A 318 HIS A 328 1 11 HELIX 17 17 GLU A 339 PHE A 343 5 5 HELIX 18 18 ASP A 350 LEU A 360 1 11 HELIX 19 19 ASP A 362 GLY A 376 1 15 HELIX 20 20 LEU A 383 GLU A 404 1 22 HELIX 21 21 THR A 406 MET A 414 1 9 HELIX 22 22 ASP B 52 GLY B 61 1 10 HELIX 23 23 GLU B 68 GLY B 78 1 11 HELIX 24 24 HIS B 82 ARG B 87 1 6 HELIX 25 25 ASP B 95 ASN B 105 1 11 HELIX 26 26 HIS B 126 ASN B 141 1 16 HELIX 27 27 THR B 149 LYS B 157 1 9 HELIX 28 28 THR B 160 ALA B 177 1 18 HELIX 29 29 ASP B 190 GLY B 195 1 6 HELIX 30 30 GLY B 199 HIS B 210 1 12 HELIX 31 31 THR B 212 GLY B 218 1 7 HELIX 32 32 CYS B 227 ALA B 239 1 13 HELIX 33 33 PRO B 240 SER B 245 5 6 HELIX 34 34 PHE B 246 ARG B 251 1 6 HELIX 35 35 GLN B 266 ALA B 277 1 12 HELIX 36 36 PRO B 278 GLY B 281 5 4 HELIX 37 37 THR B 317 ALA B 329 1 13 HELIX 38 38 ASP B 350 LEU B 360 1 11 HELIX 39 39 ASP B 362 GLY B 376 1 15 HELIX 40 40 THR B 380 LYS B 403 1 24 HELIX 41 41 THR B 406 THR B 415 1 10
SHEET 1 A 7 SER A 63 LYS A 64 0 SHEET 2 A 7 SER A 92 ARG A 94 -1 O HIS A 93 N SER A 63 SHEET 3 A 7 ALA A 286 SER A 290 -1 O LEU A 287 N ARG A 94 SHEET 4 A 7 GLN A 257 ALA A 263 1 N ILE A 260 O ALA A 286 SHEET 5 A 7 PHE A 109 ARG A 115 1 N TYR A 110 O LEU A 259 SHEET 6 A 7 LEU A 144 MET A 148 1 O GLN A 147 N ARG A 115 SHEET 7 A 7 THR A 185 SER A 189 1 O PHE A 186 N ILE A 146 SHEET 1 B 2 PHE B 37 VAL B 38 0 SHEET 2 B 2 VAL B 43 GLN B 44 -1 O GLN B 44 N PHE B 37 SHEET 1 C 7 SER B 63 LYS B 64 0 SHEET 2 C 7 PHE B 90 ARG B 94 -1 O HIS B 93 N SER B 63 SHEET 3 C 7 ALA B 286 SER B 290 -1 O HIS B 289 N SER B 92 SHEET 4 C 7 GLN B 257 ALA B 263 1 N CYS B 262 O LEU B 288 SHEET 5 C 7 PHE B 109 ARG B 115 1 N TYR B 110 O GLN B 257 SHEET 6 C 7 LEU B 144 MET B 148 1 O VAL B 145 N LEU B 111 SHEET 7 C 7 THR B 185 SER B 189 1 O PHE B 188 N MET B 148 SHEET 1 D 2 PRO B 294 ALA B 295 0 SHEET 2 D 2 GLY B 298 LYS B 302 -1 O THR B 301 N ALA B 295
CRYST1 136.025 96.606 98.319 90.00 130.26 90.00 C 1 2 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007352 0.000000 0.006226 0.00000
SCALE2 0.000000 0.010351 0.000000 0.00000
SCALE3 0.000000 0.000000 0.013329 0.00000