10 20 30 40 50 60 70 80 1ULG - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SUGAR BINDING PROTEIN 12-SEP-03 1ULG
TITLE CGL2 IN COMPLEX WITH THOMSEN-FRIEDENREICH ANTIGEN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GALECTIN-2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: CGL2; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COPRINOPSIS CINEREA; SOURCE 3 ORGANISM_TAXID: 5346; SOURCE 4 GENE: CGL2; SOURCE 5 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 6 EXPRESSION_SYSTEM_COMMON: BAKER'S YEAST; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SEY 6210; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PYADE4
KEYWDS GALECTIN, LECTIN, BETA-GALACTOSIDE BINDING LECTIN, SUGAR KEYWDS 2 BINDING, SUGAR BINDING PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR P.J.WALSER,P.W.HAEBEL,M.KUENZLER,U.KUES,M.AEBI,N.BAN
REVDAT 2 24-FEB-09 1ULG 1 VERSN REVDAT 1 20-APR-04 1ULG 0
JRNL AUTH P.J.WALSER,P.W.HAEBEL,M.KUENZLER,D.SARGENT,U.KUES, JRNL AUTH 2 M.AEBI,N.BAN JRNL TITL STRUCTURE AND FUNCTIONAL ANALYSIS OF THE FUNGAL JRNL TITL 2 GALECTIN CGL2 JRNL REF STRUCTURE V. 12 689 2004 JRNL REFN ISSN 0969-2126 JRNL PMID 15062091 JRNL DOI 10.1016/J.STR.2004.03.002
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.T.BRUNGER,P.D.ADAMS,G.M.CLORE,W.L.DELANO,P.GROS, REMARK 1 AUTH 2 R.W.GROSSE-KUNSTLEVE,J.S.JIANG,J.KUSZEWSKI, REMARK 1 AUTH 3 M.NILGES,N.S.PANNU,R.J.READ,L.M.RICE,T.SIMONSON, REMARK 1 AUTH 4 G.L.WARREN REMARK 1 TITL CRYSTALLOGRAPHY & NMR SYSTEM: A NEW SOFTWARE SUITE REMARK 1 TITL 2 FOR MACROMOLECULAR STRUCTURE DETERMINATION. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 54 905 1998 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S0907444998003254
REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 65.6 REMARK 3 NUMBER OF REFLECTIONS : 20221 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 981 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.30 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 56.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2052 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE : 0.3760 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 112 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.036 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4752 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 104 REMARK 3 SOLVENT ATOMS : 252 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.77000 REMARK 3 B22 (A**2) : -6.43000 REMARK 3 B33 (A**2) : 0.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -12.17000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.21 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.40 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.35 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.340 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.070 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.880 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.600 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : CNS BULK SOLVENT MODEL USED REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 45.76 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CARBOHYDRATE1.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CIS_PEPTIDE-TA.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1ULG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-SEP-03. REMARK 100 THE RCSB ID CODE IS RCSB005957.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20221 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 29.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 67.4 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.10200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: CGL2-LACTOSE REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, PEG 400, SODIUM REMARK 280 PHOSPHATE, SODIUM CHLORIDE, PH 7.3, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 56.81700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 20 -25.22 94.29 REMARK 500 ALA A 29 -79.68 -141.18 REMARK 500 PHE A 30 94.45 85.71 REMARK 500 GLU A 58 2.88 177.47 REMARK 500 ASN A 59 53.02 38.91 REMARK 500 ARG A 66 143.99 176.68 REMARK 500 ASN A 88 72.87 -112.80 REMARK 500 PHE A 104 -152.74 -105.51 REMARK 500 ALA A 127 138.27 -177.50 REMARK 500 ASN A 129 62.36 -151.79 REMARK 500 GLU B 20 -30.63 98.25 REMARK 500 ASN B 88 66.91 -115.89 REMARK 500 PHE B 104 -151.23 -106.37 REMARK 500 ALA B 127 166.15 178.62 REMARK 500 GLU C 20 -22.62 96.45 REMARK 500 ALA C 29 -38.87 -142.87 REMARK 500 PHE C 30 101.02 55.60 REMARK 500 ARG C 66 141.99 -174.05 REMARK 500 PHE C 104 -154.37 -105.86 REMARK 500 ALA C 127 132.75 -178.65 REMARK 500 GLU D 20 -17.40 90.60 REMARK 500 ARG D 66 144.81 -175.66 REMARK 500 ALA D 81 125.40 -39.29 REMARK 500 PHE D 104 -156.79 -100.45 REMARK 500 SER D 109 -177.82 -68.25 REMARK 500 ALA D 127 137.74 177.75 REMARK 500 ASN D 129 89.90 -157.14 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 179 DISTANCE = 5.04 ANGSTROMS
REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 GAL B 151 REMARK 615 NGA B 152
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL A 151 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NGA A 152 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL B 151 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NGA B 152 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL C 151 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NGA C 152 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL D 151 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NGA D 152
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SLA RELATED DB: PDB REMARK 900 MAMMALIAN HOMOLOGUE GALECTIN-1 WITH BIANTENNARY REMARK 900 OLIGOSACCHARIDE REMARK 900 RELATED ID: 1QMJ RELATED DB: PDB REMARK 900 AVIAN HOMOLOGUE CG-16 REMARK 900 RELATED ID: 1GAN RELATED DB: PDB REMARK 900 AMPHIBIAN HOMOLOGUE GALECTIN-1 WITH N-ACETYLLACTOSAMINE REMARK 900 RELATED ID: 1C1F RELATED DB: PDB REMARK 900 FISH HOMOLOGUE CONGERIN I REMARK 900 RELATED ID: 1BKZ RELATED DB: PDB REMARK 900 MAMMALIAN HOMOLOGUE GALECTIN-7 REMARK 900 RELATED ID: 1A3K RELATED DB: PDB REMARK 900 MAMMALIAN HOMOLOGUE GALECTIN-3 CARBOHYDRATE BINDING DOMAIN REMARK 900 RELATED ID: 1LCL RELATED DB: PDB REMARK 900 MAMMALIAN CHARCOT-LEYDEN PROTEIN REMARK 900 RELATED ID: 1IS5 RELATED DB: PDB REMARK 900 FISH HOMOLOGUE CONGERIN II REMARK 900 RELATED ID: 1UL9 RELATED DB: PDB REMARK 900 1UL9 CONTAINS THE SAME PROTEIN WITHOUT LIGAND REMARK 900 RELATED ID: 1ULC RELATED DB: PDB REMARK 900 1ULC CONTAINS THE SAME PROTEIN COMPLEXED WITH LACTOSE REMARK 900 RELATED ID: 1ULD RELATED DB: PDB REMARK 900 1ULD CONTAINS THE SAME PROTEIN COMPLEXED WITH BLOOD GROUP H REMARK 900 TYPE II REMARK 900 RELATED ID: 1ULE RELATED DB: PDB REMARK 900 1ULE CONTAINS THE SAME PROTEIN COMPLEXED WITH LINEAR B2 REMARK 900 TRISACCHARIDE REMARK 900 RELATED ID: 1ULF RELATED DB: PDB REMARK 900 1ULF CONTAINS THE SAME PROTEIN COMPLEXED WITH BLOOD GROUP A REMARK 900 TETRASACCHARIDE
DBREF 1ULG A 1 150 GB 6983931 AAF34732 1 150 DBREF 1ULG B 1 150 GB 6983931 AAF34732 1 150 DBREF 1ULG C 1 150 GB 6983931 AAF34732 1 150 DBREF 1ULG D 1 150 GB 6983931 AAF34732 1 150
SEQRES 1 A 150 MET LEU TYR HIS LEU PHE VAL ASN ASN GLN VAL LYS LEU SEQRES 2 A 150 GLN ASN ASP PHE LYS PRO GLU SER VAL ALA ALA ILE ARG SEQRES 3 A 150 SER SER ALA PHE ASN SER LYS GLY GLY THR THR VAL PHE SEQRES 4 A 150 ASN PHE LEU SER ALA GLY GLU ASN ILE LEU LEU HIS ILE SEQRES 5 A 150 SER ILE ARG PRO GLY GLU ASN VAL ILE VAL PHE ASN SER SEQRES 6 A 150 ARG LEU LYS ASN GLY ALA TRP GLY PRO GLU GLU ARG ILE SEQRES 7 A 150 PRO TYR ALA GLU LYS PHE ARG PRO PRO ASN PRO SER ILE SEQRES 8 A 150 THR VAL ILE ASP HIS GLY ASP ARG PHE GLN ILE ARG PHE SEQRES 9 A 150 ASP TYR GLY THR SER ILE TYR TYR ASN LYS ARG ILE LYS SEQRES 10 A 150 GLU ASN ALA ALA ALA ILE ALA TYR ASN ALA GLU ASN SER SEQRES 11 A 150 LEU PHE SER SER PRO VAL THR VAL ASP VAL HIS GLY LEU SEQRES 12 A 150 LEU PRO PRO LEU PRO PRO ALA SEQRES 1 B 150 MET LEU TYR HIS LEU PHE VAL ASN ASN GLN VAL LYS LEU SEQRES 2 B 150 GLN ASN ASP PHE LYS PRO GLU SER VAL ALA ALA ILE ARG SEQRES 3 B 150 SER SER ALA PHE ASN SER LYS GLY GLY THR THR VAL PHE SEQRES 4 B 150 ASN PHE LEU SER ALA GLY GLU ASN ILE LEU LEU HIS ILE SEQRES 5 B 150 SER ILE ARG PRO GLY GLU ASN VAL ILE VAL PHE ASN SER SEQRES 6 B 150 ARG LEU LYS ASN GLY ALA TRP GLY PRO GLU GLU ARG ILE SEQRES 7 B 150 PRO TYR ALA GLU LYS PHE ARG PRO PRO ASN PRO SER ILE SEQRES 8 B 150 THR VAL ILE ASP HIS GLY ASP ARG PHE GLN ILE ARG PHE SEQRES 9 B 150 ASP TYR GLY THR SER ILE TYR TYR ASN LYS ARG ILE LYS SEQRES 10 B 150 GLU ASN ALA ALA ALA ILE ALA TYR ASN ALA GLU ASN SER SEQRES 11 B 150 LEU PHE SER SER PRO VAL THR VAL ASP VAL HIS GLY LEU SEQRES 12 B 150 LEU PRO PRO LEU PRO PRO ALA SEQRES 1 C 150 MET LEU TYR HIS LEU PHE VAL ASN ASN GLN VAL LYS LEU SEQRES 2 C 150 GLN ASN ASP PHE LYS PRO GLU SER VAL ALA ALA ILE ARG SEQRES 3 C 150 SER SER ALA PHE ASN SER LYS GLY GLY THR THR VAL PHE SEQRES 4 C 150 ASN PHE LEU SER ALA GLY GLU ASN ILE LEU LEU HIS ILE SEQRES 5 C 150 SER ILE ARG PRO GLY GLU ASN VAL ILE VAL PHE ASN SER SEQRES 6 C 150 ARG LEU LYS ASN GLY ALA TRP GLY PRO GLU GLU ARG ILE SEQRES 7 C 150 PRO TYR ALA GLU LYS PHE ARG PRO PRO ASN PRO SER ILE SEQRES 8 C 150 THR VAL ILE ASP HIS GLY ASP ARG PHE GLN ILE ARG PHE SEQRES 9 C 150 ASP TYR GLY THR SER ILE TYR TYR ASN LYS ARG ILE LYS SEQRES 10 C 150 GLU ASN ALA ALA ALA ILE ALA TYR ASN ALA GLU ASN SER SEQRES 11 C 150 LEU PHE SER SER PRO VAL THR VAL ASP VAL HIS GLY LEU SEQRES 12 C 150 LEU PRO PRO LEU PRO PRO ALA SEQRES 1 D 150 MET LEU TYR HIS LEU PHE VAL ASN ASN GLN VAL LYS LEU SEQRES 2 D 150 GLN ASN ASP PHE LYS PRO GLU SER VAL ALA ALA ILE ARG SEQRES 3 D 150 SER SER ALA PHE ASN SER LYS GLY GLY THR THR VAL PHE SEQRES 4 D 150 ASN PHE LEU SER ALA GLY GLU ASN ILE LEU LEU HIS ILE SEQRES 5 D 150 SER ILE ARG PRO GLY GLU ASN VAL ILE VAL PHE ASN SER SEQRES 6 D 150 ARG LEU LYS ASN GLY ALA TRP GLY PRO GLU GLU ARG ILE SEQRES 7 D 150 PRO TYR ALA GLU LYS PHE ARG PRO PRO ASN PRO SER ILE SEQRES 8 D 150 THR VAL ILE ASP HIS GLY ASP ARG PHE GLN ILE ARG PHE SEQRES 9 D 150 ASP TYR GLY THR SER ILE TYR TYR ASN LYS ARG ILE LYS SEQRES 10 D 150 GLU ASN ALA ALA ALA ILE ALA TYR ASN ALA GLU ASN SER SEQRES 11 D 150 LEU PHE SER SER PRO VAL THR VAL ASP VAL HIS GLY LEU SEQRES 12 D 150 LEU PRO PRO LEU PRO PRO ALA
HET GAL A 151 11 HET NGA A 152 15 HET GAL B 151 11 HET NGA B 152 15 HET GAL C 151 11 HET NGA C 152 15 HET GAL D 151 11 HET NGA D 152 15
HETNAM GAL BETA-D-GALACTOSE HETNAM NGA N-ACETYL-D-GALACTOSAMINE
FORMUL 5 GAL 4(C6 H12 O6) FORMUL 5 NGA 4(C8 H15 N O6) FORMUL 9 HOH *252(H2 O)
HELIX 1 1 PRO C 56 GLU C 58 5 3
SHEET 1 A 6 LEU A 2 LEU A 5 0 SHEET 2 A 6 VAL A 136 HIS A 141 -1 O VAL A 138 N TYR A 3 SHEET 3 A 6 VAL A 22 ARG A 26 -1 N VAL A 22 O HIS A 141 SHEET 4 A 6 SER A 90 ASP A 95 -1 O VAL A 93 N ALA A 23 SHEET 5 A 6 ARG A 99 ARG A 103 -1 O ARG A 103 N THR A 92 SHEET 6 A 6 ILE A 110 ASN A 113 -1 O TYR A 112 N PHE A 100 SHEET 1 B 6 ASN A 9 PHE A 17 0 SHEET 2 B 6 ALA A 120 ALA A 127 -1 O ALA A 120 N PHE A 17 SHEET 3 B 6 THR A 37 LEU A 42 -1 N LEU A 42 O ALA A 121 SHEET 4 B 6 ILE A 48 ARG A 55 -1 O ILE A 54 N THR A 37 SHEET 5 B 6 VAL A 60 ARG A 66 -1 O VAL A 62 N SER A 53 SHEET 6 B 6 GLU A 76 PRO A 79 -1 O ILE A 78 N ILE A 61 SHEET 1 C 6 LEU B 2 LEU B 5 0 SHEET 2 C 6 VAL B 136 HIS B 141 -1 O VAL B 138 N TYR B 3 SHEET 3 C 6 VAL B 22 ARG B 26 -1 N ARG B 26 O THR B 137 SHEET 4 C 6 SER B 90 ASP B 95 -1 O VAL B 93 N ALA B 23 SHEET 5 C 6 ARG B 99 ARG B 103 -1 O ARG B 103 N THR B 92 SHEET 6 C 6 ILE B 110 ASN B 113 -1 O ILE B 110 N ILE B 102 SHEET 1 D 6 ASN B 9 PHE B 17 0 SHEET 2 D 6 ALA B 120 ALA B 127 -1 O ALA B 120 N PHE B 17 SHEET 3 D 6 THR B 37 LEU B 42 -1 N ASN B 40 O ALA B 124 SHEET 4 D 6 ILE B 48 ARG B 55 -1 O ILE B 54 N THR B 37 SHEET 5 D 6 VAL B 60 ARG B 66 -1 O VAL B 62 N SER B 53 SHEET 6 D 6 GLU B 76 PRO B 79 -1 O GLU B 76 N PHE B 63 SHEET 1 E 6 LEU C 2 LEU C 5 0 SHEET 2 E 6 VAL C 136 HIS C 141 -1 O VAL C 138 N TYR C 3 SHEET 3 E 6 VAL C 22 ARG C 26 -1 N VAL C 22 O HIS C 141 SHEET 4 E 6 SER C 90 ASP C 95 -1 O ILE C 91 N ILE C 25 SHEET 5 E 6 ARG C 99 ARG C 103 -1 O ARG C 103 N THR C 92 SHEET 6 E 6 ILE C 110 ASN C 113 -1 O ILE C 110 N ILE C 102 SHEET 1 F 6 ASN C 9 PHE C 17 0 SHEET 2 F 6 ALA C 120 ASN C 126 -1 O ALA C 120 N PHE C 17 SHEET 3 F 6 THR C 37 LEU C 42 -1 N LEU C 42 O ALA C 122 SHEET 4 F 6 ILE C 48 ARG C 55 -1 O LEU C 50 N PHE C 41 SHEET 5 F 6 VAL C 60 ARG C 66 -1 O VAL C 62 N SER C 53 SHEET 6 F 6 GLU C 76 PRO C 79 -1 O GLU C 76 N PHE C 63 SHEET 1 G 6 LEU D 2 LEU D 5 0 SHEET 2 G 6 VAL D 136 HIS D 141 -1 O VAL D 138 N TYR D 3 SHEET 3 G 6 VAL D 22 ARG D 26 -1 N ARG D 26 O THR D 137 SHEET 4 G 6 SER D 90 ASP D 95 -1 O ILE D 91 N ILE D 25 SHEET 5 G 6 ARG D 99 ARG D 103 -1 O ARG D 103 N THR D 92 SHEET 6 G 6 ILE D 110 ASN D 113 -1 O ILE D 110 N ILE D 102 SHEET 1 H 6 ASN D 9 PHE D 17 0 SHEET 2 H 6 ALA D 120 ALA D 127 -1 O ALA D 120 N PHE D 17 SHEET 3 H 6 THR D 37 LEU D 42 -1 N ASN D 40 O ALA D 124 SHEET 4 H 6 ILE D 48 ARG D 55 -1 O ILE D 54 N THR D 37 SHEET 5 H 6 VAL D 60 ARG D 66 -1 O VAL D 62 N SER D 53 SHEET 6 H 6 GLU D 76 PRO D 79 -1 O GLU D 76 N PHE D 63
LINK C1 GAL A 151 O3 NGA A 152 1555 1555 1.39 LINK C1 GAL B 151 O3 NGA B 152 1555 1555 1.39 LINK C1 GAL C 151 O3 NGA C 152 1555 1555 1.39 LINK C1 GAL D 151 O3 NGA D 152 1555 1555 1.39
CISPEP 1 PRO A 86 PRO A 87 0 0.66 CISPEP 2 SER A 134 PRO A 135 0 0.42 CISPEP 3 PRO B 86 PRO B 87 0 0.13 CISPEP 4 SER B 134 PRO B 135 0 0.84 CISPEP 5 PRO C 86 PRO C 87 0 0.57 CISPEP 6 SER C 134 PRO C 135 0 0.29 CISPEP 7 PRO D 86 PRO D 87 0 1.05 CISPEP 8 SER D 134 PRO D 135 0 0.43
SITE 1 AC1 7 HIS A 51 SER A 53 ARG A 55 ASN A 64 SITE 2 AC1 7 TRP A 72 GLU A 75 NGA A 152 SITE 1 AC2 5 ARG A 55 GLU A 75 GAL A 151 HOH A 201 SITE 2 AC2 5 ARG C 115 SITE 1 AC3 2 HIS B 51 ARG B 55 SITE 1 AC4 2 HOH B 194 HOH B 207 SITE 1 AC5 9 HIS C 51 SER C 53 ARG C 55 ASN C 64 SITE 2 AC5 9 TRP C 72 GLU C 75 NGA C 152 HOH C 174 SITE 3 AC5 9 HOH C 185 SITE 1 AC6 5 ARG C 55 GLU C 75 GAL C 151 HOH C 220 SITE 2 AC6 5 HOH C 222 SITE 1 AC7 9 HIS D 51 ARG D 55 ASN D 64 TRP D 72 SITE 2 AC7 9 GLU D 75 NGA D 152 HOH D 210 HOH D 212 SITE 3 AC7 9 HOH D 214 SITE 1 AC8 5 ARG D 55 GLU D 58 GLU D 75 GAL D 151 SITE 2 AC8 5 HOH D 230
CRYST1 44.137 113.634 65.091 90.00 108.48 90.00 P 1 21 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.022657 0.000000 0.007573 0.00000
SCALE2 0.000000 0.008800 0.000000 0.00000
SCALE3 0.000000 0.000000 0.016199 0.00000