10 20 30 40 50 60 70 80 1UHU - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 10-JUL-03 1UHU
TITLE SOLUTION STRUCTURE OF THE RETROVIRAL GAG MA-LIKE DOMAIN OF TITLE 2 RIKEN CDNA 3110009E22
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRODUCT OF RIKEN CDNA 3110009E22; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GAG MA-LIKE DOMAIN; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 OTHER_DETAILS: IN VITRO TRANSLATION
KEYWDS STRUCTURAL GENOMICS, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 2 INITIATIVE, RSGI, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR S.SUZUKI,H.HATANAKA,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 THE RIKEN GENOME EXPLORATION RESEARCH GROUP PHASE I & II AUTHOR 3 TEAMS,Y.HAYASHIZAKI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 4 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1UHU 1 VERSN REVDAT 1 27-JUL-04 1UHU 0
JRNL AUTH S.SUZUKI,H.HATANAKA,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU, JRNL AUTH 3 THE RIKEN GENOME EXPLORATION RESEARCH GROUP PHASE JRNL AUTH 4 I & II TEAMS,Y.HAYASHIZAKI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE RETROVIRAL GAG MA-LIKE JRNL TITL 2 DOMAIN OF RIKEN CDNA 3110009E22 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.7 REMARK 3 AUTHORS : GUENTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1UHU COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JUL-03. REMARK 100 THE RCSB ID CODE IS RCSB005844.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 0.12 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 3.2MM 13C/15N-GAG MA, 20MM REMARK 210 PHOSPHATE BUFFER NA, 100MM REMARK 210 NACL, 1MM D-DTT REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1B, NMRPIPE 20020425, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.771, REMARK 210 OLIVIA 1.9.5, CYANA 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYANAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 113.77 -165.98 REMARK 500 1 SER A 5 148.20 -171.10 REMARK 500 1 SER A 27 44.15 72.90 REMARK 500 1 ALA A 40 -60.62 -97.47 REMARK 500 1 SER A 41 36.23 -152.27 REMARK 500 1 ASP A 47 84.53 78.27 REMARK 500 1 VAL A 48 -45.05 -159.94 REMARK 500 1 PHE A 56 38.73 -99.25 REMARK 500 1 PHE A 69 41.61 -90.31 REMARK 500 1 ILE A 97 -61.40 -100.67 REMARK 500 1 SER A 102 82.48 63.46 REMARK 500 2 SER A 1 101.60 60.71 REMARK 500 2 SER A 2 114.63 63.53 REMARK 500 2 SER A 4 -60.19 -125.16 REMARK 500 2 SER A 27 50.98 78.00 REMARK 500 2 SER A 41 40.26 -151.49 REMARK 500 2 ASP A 47 89.16 74.63 REMARK 500 2 VAL A 48 -44.27 -160.84 REMARK 500 2 PHE A 69 42.79 -91.54 REMARK 500 2 SER A 75 151.84 -44.65 REMARK 500 2 ILE A 97 -60.18 -102.31 REMARK 500 2 SER A 103 111.56 62.96 REMARK 500 3 SER A 2 79.39 45.71 REMARK 500 3 SER A 4 78.52 58.75 REMARK 500 3 SER A 41 38.48 -159.01 REMARK 500 3 ASP A 47 82.23 47.62 REMARK 500 3 VAL A 48 -59.44 -151.68 REMARK 500 3 PHE A 56 43.03 -97.33 REMARK 500 3 PHE A 69 48.02 -96.04 REMARK 500 3 SER A 75 150.40 -44.63 REMARK 500 3 ASN A 92 63.83 -112.47 REMARK 500 3 SER A 93 116.96 -38.46 REMARK 500 4 SER A 1 -58.97 -147.59 REMARK 500 4 SER A 4 -59.13 -142.15 REMARK 500 4 ALA A 40 -68.69 -95.20 REMARK 500 4 SER A 41 37.03 -143.75 REMARK 500 4 ASP A 47 84.99 55.54 REMARK 500 4 VAL A 48 -52.12 -157.76 REMARK 500 4 PHE A 69 41.82 -87.85 REMARK 500 4 SER A 93 109.81 -57.46 REMARK 500 4 ILE A 97 -60.73 -104.99 REMARK 500 4 SER A 102 -75.34 -102.75 REMARK 500 5 SER A 5 -62.92 -167.24 REMARK 500 5 SER A 41 36.17 -154.09 REMARK 500 5 ASP A 47 82.41 61.84 REMARK 500 5 VAL A 48 -59.09 -159.76 REMARK 500 5 PHE A 56 30.53 -94.43 REMARK 500 5 PHE A 69 42.52 -89.78 REMARK 500 5 ILE A 97 -62.86 -103.71 REMARK 500 5 SER A 102 113.85 -177.17 REMARK 500 6 SER A 1 84.22 -168.96 REMARK 500 6 SER A 2 80.22 48.47 REMARK 500 6 SER A 4 106.07 -170.35 REMARK 500 6 SER A 41 34.45 -157.52 REMARK 500 6 ASP A 47 88.20 63.23 REMARK 500 6 VAL A 48 -43.20 -164.29 REMARK 500 6 PHE A 69 43.14 -86.74 REMARK 500 6 ASP A 71 -153.51 39.44 REMARK 500 7 SER A 5 -62.36 -175.56 REMARK 500 7 ALA A 40 -60.88 -92.52 REMARK 500 7 SER A 41 38.09 -153.83 REMARK 500 7 ASP A 47 64.00 68.83 REMARK 500 7 VAL A 48 -61.23 -137.57 REMARK 500 7 PHE A 69 36.65 -93.78 REMARK 500 7 SER A 75 150.10 -49.60 REMARK 500 7 ASN A 92 50.90 -97.58 REMARK 500 7 SER A 93 108.69 -41.13 REMARK 500 7 ILE A 97 -61.01 -109.12 REMARK 500 7 SER A 102 115.28 64.53 REMARK 500 8 SER A 1 148.06 62.75 REMARK 500 8 SER A 2 -171.84 -172.47 REMARK 500 8 SER A 4 76.02 56.12 REMARK 500 8 SER A 5 104.83 -178.12 REMARK 500 8 SER A 41 39.60 -158.99 REMARK 500 8 ASP A 47 89.18 74.72 REMARK 500 8 VAL A 48 -44.46 -161.44 REMARK 500 8 PHE A 56 42.24 -101.76 REMARK 500 8 PHE A 69 36.32 -94.91 REMARK 500 8 ASN A 92 51.80 -119.97 REMARK 500 8 SER A 93 117.83 -36.56 REMARK 500 8 SER A 99 -58.76 -150.77 REMARK 500 8 SER A 102 77.80 65.00 REMARK 500 9 SER A 1 90.24 52.52 REMARK 500 9 SER A 4 74.83 45.56 REMARK 500 9 SER A 5 141.15 -174.33 REMARK 500 9 HIS A 15 42.32 -104.41 REMARK 500 9 SER A 41 38.34 -161.83 REMARK 500 9 ASP A 47 73.51 68.80 REMARK 500 9 VAL A 48 -59.90 -151.32 REMARK 500 9 PHE A 56 45.69 -103.35 REMARK 500 9 ASN A 92 59.36 -112.34 REMARK 500 9 SER A 93 116.87 -35.48 REMARK 500 9 ILE A 97 -61.75 -106.13 REMARK 500 9 SER A 102 86.81 39.66 REMARK 500 10 SER A 1 106.28 59.95 REMARK 500 10 SER A 4 76.33 -160.81 REMARK 500 10 SER A 41 40.53 -161.55 REMARK 500 10 ASP A 47 84.96 63.52 REMARK 500 10 VAL A 48 -46.55 -158.50 REMARK 500 10 PHE A 56 41.60 -90.89 REMARK 500 10 GLN A 70 -171.11 -63.25 REMARK 500 10 ASN A 92 51.32 -95.28 REMARK 500 10 SER A 93 110.72 -38.96 REMARK 500 10 SER A 99 83.54 -163.75 REMARK 500 10 SER A 103 150.09 64.26 REMARK 500 11 SER A 5 84.09 44.75 REMARK 500 11 SER A 27 46.67 71.29 REMARK 500 11 ALA A 40 -63.56 -91.41 REMARK 500 11 SER A 41 37.09 -151.33 REMARK 500 11 GLN A 70 -179.96 -65.20 REMARK 500 11 SER A 75 159.62 -47.67 REMARK 500 11 ILE A 97 -67.81 -108.32 REMARK 500 11 SER A 103 143.71 62.06 REMARK 500 12 SER A 41 35.69 -151.92 REMARK 500 12 ASP A 47 81.49 58.93 REMARK 500 12 VAL A 48 -45.83 -152.86 REMARK 500 12 PHE A 69 38.98 -94.81 REMARK 500 13 SER A 1 90.49 54.51 REMARK 500 13 SER A 2 -60.58 -169.98 REMARK 500 13 SER A 4 161.07 61.30 REMARK 500 13 SER A 5 175.42 -48.37 REMARK 500 13 SER A 27 50.41 79.80 REMARK 500 13 SER A 41 37.37 -166.52 REMARK 500 13 ASP A 47 83.50 59.88 REMARK 500 13 VAL A 48 -45.44 -157.63 REMARK 500 13 GLN A 70 -178.34 -50.65 REMARK 500 13 SER A 75 164.90 -42.29 REMARK 500 13 ASN A 92 60.82 -113.46 REMARK 500 13 SER A 93 115.17 -37.44 REMARK 500 13 ILE A 97 -62.85 -103.80 REMARK 500 13 LYS A 98 65.38 39.77 REMARK 500 13 SER A 103 83.81 61.90 REMARK 500 14 SER A 1 83.69 60.04 REMARK 500 14 ALA A 40 -66.24 -94.98 REMARK 500 14 SER A 41 39.20 -146.87 REMARK 500 14 ASP A 47 78.66 63.96 REMARK 500 14 VAL A 48 -68.76 -150.97 REMARK 500 14 PHE A 56 50.48 -101.43 REMARK 500 14 ASN A 92 59.91 -107.68 REMARK 500 14 SER A 93 113.97 -35.99 REMARK 500 14 ILE A 97 -62.75 -105.89 REMARK 500 15 SER A 4 166.17 65.08 REMARK 500 15 ALA A 40 -64.93 -97.74 REMARK 500 15 SER A 41 38.22 -147.34 REMARK 500 15 ASP A 47 95.68 70.10 REMARK 500 15 VAL A 48 -76.72 -169.08 REMARK 500 15 PHE A 56 44.59 -95.61 REMARK 500 15 PHE A 69 31.00 -94.05 REMARK 500 16 SER A 5 110.47 179.05 REMARK 500 16 SER A 27 46.62 76.86 REMARK 500 16 ALA A 40 -60.95 -99.11 REMARK 500 16 SER A 41 38.91 -151.43 REMARK 500 16 ASP A 47 95.87 72.88 REMARK 500 16 VAL A 48 -56.29 -168.40 REMARK 500 16 PHE A 56 49.70 -99.74 REMARK 500 16 PHE A 69 33.55 -89.30 REMARK 500 16 GLN A 91 -71.54 -64.52 REMARK 500 16 ILE A 97 -61.12 -107.29 REMARK 500 17 SER A 4 100.53 59.78 REMARK 500 17 ALA A 40 -65.20 -101.24 REMARK 500 17 SER A 41 32.50 -141.82 REMARK 500 17 VAL A 48 -44.58 -132.54 REMARK 500 17 PHE A 56 33.17 -94.57 REMARK 500 17 GLN A 91 -71.97 -46.68 REMARK 500 17 ILE A 97 -72.10 -111.71 REMARK 500 17 SER A 103 154.52 60.81 REMARK 500 18 SER A 1 142.70 -177.91 REMARK 500 18 SER A 41 37.00 -152.23 REMARK 500 18 ASP A 47 93.85 57.22 REMARK 500 18 VAL A 48 -71.30 -164.51 REMARK 500 18 PHE A 56 47.43 -108.24 REMARK 500 18 SER A 75 153.47 -49.41 REMARK 500 18 SER A 93 112.72 -37.02 REMARK 500 18 SER A 99 -51.86 -164.04 REMARK 500 18 SER A 102 -57.79 -126.44 REMARK 500 19 SER A 1 -70.29 -157.01 REMARK 500 19 SER A 4 153.21 62.56 REMARK 500 19 SER A 27 43.85 74.69 REMARK 500 19 SER A 41 38.81 -167.95 REMARK 500 19 ASP A 47 87.75 76.00 REMARK 500 19 VAL A 48 -44.16 -161.55 REMARK 500 19 PHE A 56 47.09 -97.73 REMARK 500 19 GLN A 70 -173.20 -63.82 REMARK 500 19 SER A 93 111.47 -37.59 REMARK 500 19 ILE A 97 -70.30 -113.32 REMARK 500 19 LYS A 98 138.24 75.21 REMARK 500 20 SER A 1 -58.01 -128.48 REMARK 500 20 SER A 4 -49.11 -131.02 REMARK 500 20 SER A 5 112.34 62.87 REMARK 500 20 SER A 41 38.84 -155.17 REMARK 500 20 ASP A 47 83.14 77.43 REMARK 500 20 VAL A 48 -52.36 -159.40 REMARK 500 20 PHE A 69 33.15 -96.70 REMARK 500 20 SER A 93 113.50 -37.15 REMARK 500 20 ILE A 97 -64.13 -104.65 REMARK 500 20 SER A 102 88.64 -152.01 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMK001004487.1 RELATED DB: TARGETDB
DBREF 1UHU A 0 104 PDB 1UHU 1UHU 0 104
SEQRES 1 A 105 GLY SER SER GLY SER SER GLY THR PRO LEU SER LEU THR SEQRES 2 A 105 LEU ASP HIS TRP SER GLU ILE ARG SER ARG ALA HIS ASN SEQRES 3 A 105 LEU SER VAL GLU ILE LYS LYS GLY PRO TRP ARG THR PHE SEQRES 4 A 105 CYS ALA SER GLU TRP PRO THR PHE ASP VAL GLY TRP PRO SEQRES 5 A 105 PRO GLU GLY THR PHE ASP LEU THR VAL ILE PHE GLU VAL SEQRES 6 A 105 LYS ALA ILE VAL PHE GLN ASP GLY PRO GLY SER HIS PRO SEQRES 7 A 105 ASP GLN GLN PRO TYR ILE THR VAL TRP GLN ASP LEU VAL SEQRES 8 A 105 GLN ASN SER PRO PRO TRP ILE LYS SER GLY PRO SER SER SEQRES 9 A 105 GLY
HELIX 1 1 THR A 7 HIS A 15 1 9 HELIX 2 2 HIS A 15 SER A 27 1 13 HELIX 3 3 LYS A 31 GLU A 42 1 12 HELIX 4 4 ASP A 57 PHE A 69 1 13 HELIX 5 5 GLN A 79 ASN A 92 1 14
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000