10 20 30 40 50 60 70 80 1UFM - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SIGNALING PROTEIN 02-JUN-03 1UFM
TITLE SOLUTION STRUCTURE OF THE PCI DOMAIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: COP9 COMPLEX SUBUNIT 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PCI DOMAIN; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: P020826-24; SOURCE 7 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS HELIX-TURN-HELIX, STRUCTURAL GENOMICS, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR S.SUZUKI,H.HATANAKA,T.KIGAWA,M.SHIROUZU,Y.HAYASHIZAKI,THE AUTHOR 2 RIKEN GENOME EXPLORATION RESEARCH GROUP PHASE I & II TEAMS, AUTHOR 3 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 4 (RSGI)
REVDAT 2 24-FEB-09 1UFM 1 VERSN REVDAT 1 29-JUN-04 1UFM 0
JRNL AUTH S.SUZUKI,H.HATANAKA,T.KIGAWA,M.SHIROUZU, JRNL AUTH 2 Y.HAYASHIZAKI, JRNL AUTH 3 THE RIKEN GENOME EXPLORATION RESEARCH GROUP PHASE JRNL AUTH 4 I & II TEAMS,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE PCI DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.7 REMARK 3 AUTHORS : GUENTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1UFM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JUN-03. REMARK 100 THE RCSB ID CODE IS RCSB005773.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 0.12 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 6.1MM 13C/15N-PCI DOMAIN, REMARK 210 20MM PHOSPHATE BUFFER NA, REMARK 210 100MM NACL, 1MM D-DTT REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1B, NMRPIPE 20020425, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.771, REMARK 210 OLIVIA 1.9.5, CYANA 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 293 84.44 60.37 REMARK 500 1 SER A 297 -53.49 -156.88 REMARK 500 1 LEU A 300 169.06 -45.52 REMARK 500 1 ASP A 301 107.49 -58.76 REMARK 500 1 LEU A 315 -82.19 -101.56 REMARK 500 1 GLU A 365 77.21 60.15 REMARK 500 1 SER A 367 -59.64 -142.12 REMARK 500 2 SER A 290 -58.15 -152.16 REMARK 500 2 SER A 293 165.68 56.59 REMARK 500 2 SER A 297 -57.46 -174.42 REMARK 500 2 LEU A 300 96.50 -57.77 REMARK 500 2 LEU A 315 -87.85 -93.34 REMARK 500 2 GLU A 365 95.15 55.27 REMARK 500 2 SER A 367 84.05 41.84 REMARK 500 2 SER A 371 -58.36 -149.68 REMARK 500 3 SER A 290 81.39 -172.72 REMARK 500 3 SER A 291 -57.99 -144.38 REMARK 500 3 SER A 293 161.76 64.68 REMARK 500 3 SER A 294 154.87 61.31 REMARK 500 3 SER A 297 114.98 -165.60 REMARK 500 3 LEU A 300 77.55 37.44 REMARK 500 3 LEU A 315 -69.42 -137.29 REMARK 500 3 ALA A 366 -62.10 -107.61 REMARK 500 3 SER A 371 88.87 -162.08 REMARK 500 4 SER A 293 101.80 -170.09 REMARK 500 4 SER A 294 -60.51 -105.95 REMARK 500 4 SER A 297 -65.31 -103.63 REMARK 500 4 LEU A 300 156.77 -40.57 REMARK 500 4 ASP A 301 107.39 -59.50 REMARK 500 4 LEU A 315 -63.17 -139.65 REMARK 500 4 SER A 367 -62.57 75.08 REMARK 500 4 SER A 371 89.22 46.43 REMARK 500 5 SER A 290 -58.41 -125.01 REMARK 500 5 SER A 291 -58.32 -169.97 REMARK 500 5 SER A 297 86.51 46.31 REMARK 500 5 LEU A 300 107.01 -42.73 REMARK 500 5 LEU A 315 -79.47 -102.11 REMARK 500 5 GLU A 365 154.15 59.85 REMARK 500 5 ALA A 366 89.78 41.55 REMARK 500 5 SER A 367 110.35 -162.82 REMARK 500 6 SER A 293 80.39 -175.33 REMARK 500 6 SER A 294 114.82 179.18 REMARK 500 6 SER A 297 101.49 -51.35 REMARK 500 6 ASP A 301 107.95 -58.99 REMARK 500 6 LEU A 315 -79.14 -101.57 REMARK 500 6 GLU A 329 17.13 56.64 REMARK 500 6 ALA A 366 151.88 67.52 REMARK 500 6 SER A 367 -63.38 -136.57 REMARK 500 7 SER A 294 85.65 -174.67 REMARK 500 7 SER A 298 98.36 -172.21 REMARK 500 7 ILE A 299 30.29 39.90 REMARK 500 7 LEU A 315 -77.99 -99.15 REMARK 500 7 SER A 371 -60.48 -100.49 REMARK 500 8 SER A 290 143.60 -179.36 REMARK 500 8 SER A 291 160.67 62.03 REMARK 500 8 SER A 293 77.97 177.68 REMARK 500 8 SER A 294 172.06 53.55 REMARK 500 8 SER A 297 -173.94 -171.34 REMARK 500 8 LEU A 300 161.59 -44.27 REMARK 500 8 ASP A 301 107.37 -58.86 REMARK 500 8 LEU A 315 -62.95 -138.63 REMARK 500 8 SER A 367 147.99 177.10 REMARK 500 8 SER A 371 81.11 42.42 REMARK 500 9 SER A 290 88.51 -156.23 REMARK 500 9 SER A 293 122.01 -172.39 REMARK 500 9 LEU A 315 -49.08 -140.96 REMARK 500 9 SER A 367 162.75 60.75 REMARK 500 10 ILE A 299 34.70 -93.25 REMARK 500 10 LEU A 315 -84.43 -102.13 REMARK 500 10 SER A 371 -58.46 -178.35 REMARK 500 11 SER A 291 164.32 56.91 REMARK 500 11 SER A 293 86.19 54.63 REMARK 500 11 SER A 294 -83.59 69.79 REMARK 500 11 SER A 297 106.69 -51.49 REMARK 500 11 ASP A 301 107.37 -58.94 REMARK 500 11 LEU A 315 -75.61 -137.17 REMARK 500 11 ARG A 347 -37.49 -38.75 REMARK 500 11 ALA A 366 88.54 -167.58 REMARK 500 12 SER A 291 -60.11 -159.79 REMARK 500 12 SER A 298 -177.90 -65.55 REMARK 500 12 LEU A 315 -66.09 -137.74 REMARK 500 12 ALA A 366 77.59 -150.60 REMARK 500 12 SER A 367 -57.09 -165.22 REMARK 500 13 SER A 290 78.77 54.03 REMARK 500 13 SER A 294 86.01 68.60 REMARK 500 13 LEU A 300 104.97 -41.22 REMARK 500 13 LEU A 315 -87.92 -98.15 REMARK 500 13 GLU A 329 -0.67 76.28 REMARK 500 13 SER A 367 146.09 63.59 REMARK 500 13 SER A 370 81.90 40.67 REMARK 500 14 SER A 291 -58.21 -160.87 REMARK 500 14 SER A 293 134.73 61.91 REMARK 500 14 SER A 294 80.35 178.36 REMARK 500 14 SER A 297 155.48 -39.72 REMARK 500 14 LEU A 300 101.32 -56.99 REMARK 500 14 LEU A 315 -78.89 -69.62 REMARK 500 14 SER A 367 83.01 63.83 REMARK 500 14 SER A 370 -62.79 -97.71 REMARK 500 14 SER A 371 103.75 60.66 REMARK 500 15 SER A 290 87.44 54.01 REMARK 500 15 SER A 293 -85.55 63.61 REMARK 500 15 SER A 294 88.90 76.71 REMARK 500 15 LEU A 300 106.14 -40.47 REMARK 500 15 LEU A 315 -84.09 -97.27 REMARK 500 15 ALA A 366 77.79 43.44 REMARK 500 15 PRO A 369 -70.13 -74.98 REMARK 500 16 SER A 290 82.63 54.13 REMARK 500 16 SER A 298 -177.02 -174.63 REMARK 500 16 LEU A 315 -84.78 -89.57 REMARK 500 16 SER A 370 83.26 -166.29 REMARK 500 16 SER A 371 88.40 43.14 REMARK 500 17 SER A 291 154.42 59.48 REMARK 500 17 SER A 293 107.53 -173.26 REMARK 500 17 SER A 294 128.69 178.75 REMARK 500 17 SER A 297 -63.06 -175.83 REMARK 500 17 ILE A 299 29.23 40.78 REMARK 500 17 LEU A 300 106.25 -41.04 REMARK 500 17 LEU A 315 -86.29 -81.17 REMARK 500 17 ARG A 347 -34.76 -38.84 REMARK 500 17 SER A 370 169.11 54.97 REMARK 500 17 SER A 371 -58.59 -129.43 REMARK 500 18 SER A 290 113.49 61.85 REMARK 500 18 SER A 291 152.02 179.02 REMARK 500 18 SER A 293 -57.26 -164.80 REMARK 500 18 SER A 294 78.93 -152.08 REMARK 500 18 SER A 298 -178.57 171.54 REMARK 500 18 LEU A 300 109.37 -40.73 REMARK 500 18 LEU A 315 -70.86 -73.26 REMARK 500 18 SER A 367 107.77 -160.99 REMARK 500 19 SER A 291 168.22 58.78 REMARK 500 19 SER A 297 88.78 -169.78 REMARK 500 19 SER A 298 -175.54 175.15 REMARK 500 19 LEU A 315 -67.09 -142.29 REMARK 500 19 ARG A 347 -36.08 -39.26 REMARK 500 19 ALA A 366 120.92 67.78 REMARK 500 20 SER A 290 82.98 39.61 REMARK 500 20 LEU A 300 -164.51 42.27 REMARK 500 20 ASP A 301 109.90 -58.60 REMARK 500 20 LEU A 315 -70.23 -133.50 REMARK 500 20 ALA A 366 75.77 71.87 REMARK 500 20 SER A 370 95.78 -168.93 REMARK 500 20 SER A 371 98.63 53.88 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007014683.1 RELATED DB: TARGETDB
DBREF 1UFM A 296 366 UNP O88544 CSN4_MOUSE 296 366
SEQADV 1UFM GLY A 289 UNP O88544 CLONING ARTIFACT SEQADV 1UFM SER A 290 UNP O88544 CLONING ARTIFACT SEQADV 1UFM SER A 291 UNP O88544 CLONING ARTIFACT SEQADV 1UFM GLY A 292 UNP O88544 CLONING ARTIFACT SEQADV 1UFM SER A 293 UNP O88544 CLONING ARTIFACT SEQADV 1UFM SER A 294 UNP O88544 CLONING ARTIFACT SEQADV 1UFM GLY A 295 UNP O88544 CLONING ARTIFACT SEQADV 1UFM SER A 367 UNP O88544 CLONING ARTIFACT SEQADV 1UFM GLY A 368 UNP O88544 CLONING ARTIFACT SEQADV 1UFM PRO A 369 UNP O88544 CLONING ARTIFACT SEQADV 1UFM SER A 370 UNP O88544 CLONING ARTIFACT SEQADV 1UFM SER A 371 UNP O88544 CLONING ARTIFACT SEQADV 1UFM GLY A 372 UNP O88544 CLONING ARTIFACT
SEQRES 1 A 84 GLY SER SER GLY SER SER GLY GLY SER SER ILE LEU ASP SEQRES 2 A 84 ARG ALA VAL ILE GLU HIS ASN LEU LEU SER ALA SER LYS SEQRES 3 A 84 LEU TYR ASN ASN ILE THR PHE GLU GLU LEU GLY ALA LEU SEQRES 4 A 84 LEU GLU ILE PRO ALA ALA LYS ALA GLU LYS ILE ALA SER SEQRES 5 A 84 GLN MET ILE THR GLU GLY ARG MET ASN GLY PHE ILE ASP SEQRES 6 A 84 GLN ILE ASP GLY ILE VAL HIS PHE GLU THR ARG GLU ALA SEQRES 7 A 84 SER GLY PRO SER SER GLY
HELIX 1 1 ASP A 301 LEU A 315 1 15 HELIX 2 2 PHE A 321 LEU A 328 1 8 HELIX 3 3 PRO A 331 GLU A 345 1 15
SHEET 1 A 3 ASN A 318 THR A 320 0 SHEET 2 A 3 ILE A 358 PHE A 361 -1 O VAL A 359 N ILE A 319 SHEET 3 A 3 GLY A 350 ASP A 353 -1 N ASP A 353 O ILE A 358
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000