10 20 30 40 50 60 70 80 1UC6 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN BINDING 08-APR-03 1UC6
TITLE SOLUTION STRUCTURE OF THE CARBOXYL TERMINAL DOMAIN OF THE TITLE 2 CILIARY NEUROTROPHIC FACTOR RECEPTOR
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CILIARY NEUROTROPHIC FACTOR RECEPTOR ALPHA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CARBOXYL TERMINAL DOMAIN; COMPND 5 SYNONYM: CNTF RECEPTOR; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1
KEYWDS CYTOKINE, CILIARY NEUROTROPHIC FACTOR, LEUKEMIA INHIBITORY KEYWDS 2 FACTOR, CYTOKINE RECEPTOR, FIBRONECTIN TYPE III DOMAIN-LIKE KEYWDS 3 TOPOLOGY, SEVEN BETA-STRANDS, TWO ANTI-PARALLEL BETA-SHEETS, KEYWDS 4 NMR, PROTEIN BINDING
EXPDTA SOLUTION NMR
NUMMDL 21
MDLTYP MINIMIZED AVERAGE
AUTHOR D.MAN,W.HE,K.H.SZE,G.KE,D.K.SMITH,N.Y.IP,G.ZHU
REVDAT 2 24-FEB-09 1UC6 1 VERSN REVDAT 1 10-AUG-04 1UC6 0
JRNL AUTH D.MAN,W.HE,K.H.SZE,K.GONG,D.K.SMITH,G.ZHU,N.Y.IP JRNL TITL SOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF THE JRNL TITL 2 CILIARY NEUROTROPHIC FACTOR (CNTF) RECEPTOR AND JRNL TITL 3 LIGAND FREE ASSOCIATIONS AMONG COMPONENTS OF THE JRNL TITL 4 CNTF RECEPTOR COMPLEX JRNL REF J.BIOL.CHEM. V. 278 23285 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12707266 JRNL DOI 10.1074/JBC.M301976200
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, REMARK 3 RICE,SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: FOLLOWING IDENTIFICATION OF THE REMARK 3 GLOBAL FOLD FROM MANUAL INSPECTION OF THE NUCLEAR OVERHAUSER REMARK 3 EFFECT SPECTROSCOPY DATA, AMBIGUOUS NOE RESTRAINTS WERE REMARK 3 RESOLVED USING THE ITERATIVE ARIA METHOD (NILGES ET AL., 1997) REMARK 3 AND THE STRUCTURE WAS DETERMINED BY SIMULATED ANNEALING USING REMARK 3 THE CNS PACKAGE.
REMARK 4 REMARK 4 1UC6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-APR-03. REMARK 100 THE RCSB ID CODE IS RCSB005666.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100MM NACL, 10MM SODIUM REMARK 210 PHOSPHATE, 0.1MM EDTA REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2MM CNTFR-BC U-15N; 100MM REMARK 210 NACL, 10MM SODIUM PHOSPHATE, REMARK 210 0.1MM EDTA; 1.3MM CNTFR-BC U- REMARK 210 15N,13C; 100MM NACL, 10MM REMARK 210 SODIUM PHOSPHATE, 0.1MM EDTA REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY, HNHA, NJ- REMARK 210 HMQC REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ, 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 2.0, PIPP REMARK 210 1.0, SPARKY 1.06, ARIA 1.1, REMARK 210 CNS 1.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 21 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: FOR DETERMINATION OF HYDROGEN BONDS, AMIDE PROTONS REMARK 210 EXCHANGING SLOWLY WITH DEUTERONS WERE IDENTIFIED BY TIME REMARK 210 COURSE 1H-15N HSQC EXPERIMENTS ON A FREEZE-DRIED 15N-LABELLED REMARK 210 SAMPLE OF BC DISSOLVED IN D2O BUFFER.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 3 82.70 51.40 REMARK 500 1 SER A 5 33.85 -79.25 REMARK 500 1 PRO A 23 32.84 -78.44 REMARK 500 1 ARG A 24 -4.03 -160.52 REMARK 500 1 PRO A 37 -95.98 -76.30 REMARK 500 1 PRO A 43 100.08 -57.17 REMARK 500 1 ASN A 65 36.80 -158.41 REMARK 500 1 GLU A 90 -78.40 -69.48 REMARK 500 1 THR A 93 65.75 -114.72 REMARK 500 1 SER A 98 -90.58 -110.53 REMARK 500 1 TRP A 106 109.30 -46.37 REMARK 500 2 LYS A 7 114.79 130.25 REMARK 500 2 PRO A 37 -105.88 -76.41 REMARK 500 2 LEU A 55 -40.43 -138.34 REMARK 500 2 ASN A 65 71.63 -157.59 REMARK 500 2 TRP A 97 101.48 -51.98 REMARK 500 2 SER A 98 -78.61 -91.21 REMARK 500 2 PRO A 105 -164.58 -68.33 REMARK 500 3 PRO A 11 139.78 -38.78 REMARK 500 3 PRO A 23 49.33 -76.37 REMARK 500 3 ARG A 24 -19.48 -170.92 REMARK 500 3 PRO A 37 -151.47 -73.00 REMARK 500 3 PRO A 39 44.45 -74.89 REMARK 500 3 LEU A 44 100.39 53.03 REMARK 500 3 SER A 98 -104.50 -90.64 REMARK 500 4 PRO A 2 39.19 -89.41 REMARK 500 4 LEU A 53 48.98 -76.24 REMARK 500 4 ILE A 54 -25.92 -148.69 REMARK 500 4 ASN A 65 103.26 -163.14 REMARK 500 4 LYS A 87 148.52 -173.40 REMARK 500 4 SER A 98 -87.59 -90.43 REMARK 500 4 PRO A 105 -145.64 -67.52 REMARK 500 5 PRO A 2 48.66 -83.86 REMARK 500 5 ARG A 24 0.64 -151.31 REMARK 500 5 PRO A 37 -85.85 -54.90 REMARK 500 5 GLU A 40 -50.49 -124.22 REMARK 500 5 SER A 41 32.71 -96.04 REMARK 500 5 LEU A 55 -51.32 -133.40 REMARK 500 5 SER A 98 -81.71 -90.49 REMARK 500 6 LYS A 7 83.89 49.08 REMARK 500 6 PRO A 10 -74.61 -48.62 REMARK 500 6 PRO A 37 -81.66 -77.12 REMARK 500 6 PRO A 43 99.35 -65.30 REMARK 500 6 ASN A 65 51.56 -148.44 REMARK 500 6 ILE A 91 34.98 -144.50 REMARK 500 6 TRP A 97 103.95 -59.62 REMARK 500 6 SER A 98 -86.50 -91.13 REMARK 500 7 PRO A 37 -102.13 -68.24 REMARK 500 7 ILE A 54 -28.54 -153.52 REMARK 500 7 ASN A 65 62.32 -165.80 REMARK 500 7 SER A 98 -82.22 -93.15 REMARK 500 7 TRP A 106 105.35 -51.38 REMARK 500 8 LEU A 3 -54.55 -129.75 REMARK 500 8 LYS A 7 92.02 65.42 REMARK 500 8 PRO A 43 77.91 -69.01 REMARK 500 8 THR A 67 -15.75 -141.87 REMARK 500 8 SER A 98 -89.27 -90.09 REMARK 500 8 PRO A 105 -179.14 -65.01 REMARK 500 9 LYS A 7 95.48 71.10 REMARK 500 9 PRO A 23 21.83 -78.36 REMARK 500 9 ARG A 24 -4.48 -144.08 REMARK 500 9 PRO A 37 -110.07 -73.70 REMARK 500 9 LEU A 44 161.00 69.11 REMARK 500 9 ASP A 56 65.20 -118.11 REMARK 500 9 ASN A 65 39.87 -156.52 REMARK 500 9 ALA A 68 76.82 -111.15 REMARK 500 9 GLU A 90 -61.33 -96.69 REMARK 500 9 TRP A 97 98.52 -63.00 REMARK 500 9 PRO A 105 174.76 -58.60 REMARK 500 10 PRO A 23 35.93 -72.01 REMARK 500 10 ARG A 24 1.84 -158.22 REMARK 500 10 PRO A 37 -87.24 -76.21 REMARK 500 10 LEU A 44 179.42 63.86 REMARK 500 10 ILE A 54 -39.41 -151.95 REMARK 500 10 HIS A 60 -92.83 -170.72 REMARK 500 10 ASN A 65 49.23 -168.96 REMARK 500 10 TRP A 97 96.52 -69.19 REMARK 500 11 PRO A 11 153.21 -47.84 REMARK 500 11 PRO A 23 42.18 -75.24 REMARK 500 11 ARG A 24 -13.31 -161.25 REMARK 500 11 PRO A 37 -145.16 -72.80 REMARK 500 11 LEU A 53 41.15 -74.21 REMARK 500 11 ASP A 56 78.04 -112.62 REMARK 500 11 VAL A 61 -141.52 -134.14 REMARK 500 11 GLU A 62 -140.52 83.63 REMARK 500 11 ASN A 65 108.40 -167.11 REMARK 500 11 LYS A 87 149.16 -176.07 REMARK 500 11 SER A 98 -87.22 -92.06 REMARK 500 12 LYS A 7 103.11 64.05 REMARK 500 12 ARG A 24 -1.69 -145.51 REMARK 500 12 PRO A 37 -87.41 -90.41 REMARK 500 12 LEU A 44 135.05 74.18 REMARK 500 12 SER A 98 -84.06 -90.61 REMARK 500 12 PRO A 105 -169.28 -68.78 REMARK 500 13 PRO A 37 -161.94 -75.14 REMARK 500 13 LEU A 53 42.23 -75.31 REMARK 500 13 ILE A 54 -25.38 -150.51 REMARK 500 13 LEU A 55 -163.98 -163.43 REMARK 500 13 ASP A 56 -52.13 68.99 REMARK 500 13 GLN A 57 -171.14 74.01 REMARK 500 13 SER A 98 -74.45 -93.93 REMARK 500 14 VAL A 6 -127.97 56.93 REMARK 500 14 PRO A 11 151.91 -49.55 REMARK 500 14 PRO A 37 -104.57 -75.85 REMARK 500 14 THR A 67 13.94 -145.96 REMARK 500 14 TRP A 97 92.25 -69.17 REMARK 500 14 SER A 98 -77.62 -90.11 REMARK 500 14 PRO A 105 -178.55 -64.43 REMARK 500 15 LEU A 3 -56.58 73.85 REMARK 500 15 VAL A 6 -40.06 -150.99 REMARK 500 15 LYS A 7 95.41 60.20 REMARK 500 15 PRO A 37 -81.48 -82.95 REMARK 500 15 LEU A 53 44.67 -74.72 REMARK 500 15 ILE A 54 -27.76 -146.59 REMARK 500 15 GLN A 57 74.27 -114.43 REMARK 500 15 LEU A 63 66.02 -107.20 REMARK 500 15 ILE A 91 52.52 -108.94 REMARK 500 15 SER A 98 -80.18 -90.13 REMARK 500 15 PRO A 105 -175.18 -68.79 REMARK 500 16 ARG A 24 -0.56 -148.16 REMARK 500 16 PRO A 37 -83.36 -70.24 REMARK 500 16 PRO A 43 98.95 -58.71 REMARK 500 16 LEU A 53 0.06 -67.60 REMARK 500 16 ASN A 65 34.88 -159.41 REMARK 500 16 ILE A 91 53.18 -119.77 REMARK 500 16 SER A 98 -84.37 -89.77 REMARK 500 17 SER A 5 45.88 -79.14 REMARK 500 17 LYS A 7 125.86 75.92 REMARK 500 17 SER A 21 -4.30 74.68 REMARK 500 17 PRO A 37 -92.46 -74.98 REMARK 500 17 LEU A 53 21.80 -76.22 REMARK 500 17 THR A 67 -3.71 -144.24 REMARK 500 17 GLU A 90 -69.84 -95.60 REMARK 500 17 TRP A 97 106.94 -52.02 REMARK 500 17 SER A 98 -78.72 -91.85 REMARK 500 17 PRO A 105 -168.99 -70.58 REMARK 500 18 VAL A 6 -166.85 -119.02 REMARK 500 18 PRO A 37 -147.98 -68.45 REMARK 500 18 LEU A 53 40.29 -73.46 REMARK 500 18 ILE A 54 -27.61 -143.41 REMARK 500 18 ASN A 65 37.01 -151.18 REMARK 500 18 TRP A 97 98.25 -60.17 REMARK 500 18 SER A 98 -86.23 -91.47 REMARK 500 19 LYS A 7 113.91 66.00 REMARK 500 19 PRO A 37 -101.87 -73.95 REMARK 500 19 ILE A 54 -32.01 -140.48 REMARK 500 19 ASN A 65 24.63 -151.79 REMARK 500 19 TRP A 97 98.80 -62.80 REMARK 500 19 SER A 98 -76.68 -91.93 REMARK 500 19 PRO A 105 -169.63 -70.13 REMARK 500 20 PRO A 2 38.72 -80.40 REMARK 500 20 PRO A 23 48.54 -76.52 REMARK 500 20 ARG A 24 -21.76 -170.48 REMARK 500 20 PRO A 37 -147.04 -72.42 REMARK 500 20 VAL A 61 -143.71 -119.74 REMARK 500 20 GLU A 62 -147.71 83.82 REMARK 500 20 ASN A 65 119.99 -171.24 REMARK 500 20 ASN A 89 32.13 -91.26 REMARK 500 20 SER A 98 -80.67 -90.03 REMARK 500 21 SER A 5 32.24 -83.08 REMARK 500 21 LYS A 7 103.94 71.96 REMARK 500 21 PRO A 37 -139.84 -74.64 REMARK 500 21 LEU A 44 108.65 63.78 REMARK 500 21 GLN A 57 75.45 -104.63 REMARK 500 21 SER A 98 -80.48 -91.92 REMARK 500 21 PRO A 105 -160.05 -69.08 REMARK 500 21 GLU A 108 106.42 -58.25 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1UC6 A 6 109 UNP P26992 CNTFR_HUMAN 202 305
SEQADV 1UC6 GLY A 1 UNP P26992 EXPRESSION TAG SEQADV 1UC6 PRO A 2 UNP P26992 EXPRESSION TAG SEQADV 1UC6 LEU A 3 UNP P26992 EXPRESSION TAG SEQADV 1UC6 GLY A 4 UNP P26992 EXPRESSION TAG SEQADV 1UC6 SER A 5 UNP P26992 EXPRESSION TAG SEQADV 1UC6 ASN A 65 UNP P26992 ASP 261 CONFLICT
SEQRES 1 A 109 GLY PRO LEU GLY SER VAL LYS PRO ASP PRO PRO GLU ASN SEQRES 2 A 109 VAL VAL ALA ARG PRO VAL PRO SER ASN PRO ARG ARG LEU SEQRES 3 A 109 GLU VAL THR TRP GLN THR PRO SER THR TRP PRO ASP PRO SEQRES 4 A 109 GLU SER PHE PRO LEU LYS PHE PHE LEU ARG TYR ARG PRO SEQRES 5 A 109 LEU ILE LEU ASP GLN TRP GLN HIS VAL GLU LEU SER ASN SEQRES 6 A 109 GLY THR ALA HIS THR ILE THR ASP ALA TYR ALA GLY LYS SEQRES 7 A 109 GLU TYR ILE ILE GLN VAL ALA ALA LYS ASP ASN GLU ILE SEQRES 8 A 109 GLY THR TRP SER ASP TRP SER VAL ALA ALA HIS ALA THR SEQRES 9 A 109 PRO TRP THR GLU GLU
SHEET 1 A 3 GLU A 12 PRO A 18 0 SHEET 2 A 3 LEU A 26 GLN A 31 -1 O THR A 29 N VAL A 15 SHEET 3 A 3 ALA A 68 ILE A 71 -1 O HIS A 69 N VAL A 28 SHEET 1 B 4 VAL A 61 LEU A 63 0 SHEET 2 B 4 PHE A 46 PRO A 52 -1 N PHE A 46 O LEU A 63 SHEET 3 B 4 TYR A 80 ALA A 85 -1 O GLN A 83 N ARG A 49 SHEET 4 B 4 VAL A 99 ALA A 103 -1 O ALA A 103 N TYR A 80
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000