1U5L - Header Asymmetric Unit

HEADER MEMBRANE PROTEIN 28-JUL-04 1U5L

TITLE SOLUTION STRUCTURE OF THE TURTLE PRION PROTEIN FRAGMENT TITLE 2 (121-226)

COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRION PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN (RESIDUES 121-226); COMPND 5 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRACHEMYS SCRIPTA; SOURCE 3 ORGANISM_COMMON: RED-EARED SLIDER TURTLE; SOURCE 4 ORGANISM_TAXID: 34903; SOURCE 5 GENE: PRNP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSETA

KEYWDS PRNP, PRP, PRION, TSE, MEMBRANE PROTEIN

EXPDTA SOLUTION NMR

NUMMDL 20

AUTHOR D.A.LYSEK,L.CALZOLAI,P.GUNTERT,K.WUTHRICH

REVDAT 4 24-FEB-09 1U5L 1 VERSN REVDAT 3 25-JAN-05 1U5L 1 JRNL REVDAT 2 11-JAN-05 1U5L 1 JRNL AUTHOR REVDAT 1 04-JAN-05 1U5L 0

JRNL AUTH L.CALZOLAI,D.A.LYSEK,D.R.PEREZ,P.GUNTERT,K.WUTHRICH JRNL TITL PRION PROTEIN NMR STRUCTURES OF CHICKEN, TURTLE, JRNL TITL 2 AND FROG JRNL REF PROC.NATL.ACAD.SCI.USA V. 102 651 2005 JRNL REFN ISSN 0027-8424 JRNL PMID 15647366 JRNL DOI 10.1073/PNAS.0408939102

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 6.0 REMARK 3 AUTHORS : GUENTERT REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL REMARK 3 OF 1632 RESTRAINTS, 1522 ARE NOE-DERIVED DISTANCE CONSTRAINTS, REMARK 3 110 DIHEDRAL ANGLE RESTRAINTS, 109

REMARK 4 REMARK 4 1U5L COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-AUG-04. REMARK 100 THE RCSB ID CODE IS RCSB023273.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 4.5 REMARK 210 IONIC STRENGTH : 10MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5MM TURTLE PRION PROTEIN U- REMARK 210 15N,13C; 10MM SODIUM ACETATE, REMARK 210 90% H2O, 10% D2O; 0.5MM TURTLE REMARK 210 PRION PROTEIN U-15N,13C; 10MM REMARK 210 SODIUM ACETATE, 99% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 600 MHZ, 750 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA 6.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 226

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 ARG A 143 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 2 VAL A 203 CA - CB - CG2 ANGL. DEV. = 9.4 DEGREES REMARK 500 3 VAL A 181 CA - CB - CG2 ANGL. DEV. = 9.9 DEGREES REMARK 500 4 TYR A 188 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 7 VAL A 181 CA - CB - CG2 ANGL. DEV. = 9.1 DEGREES REMARK 500 7 VAL A 203 CA - CB - CG2 ANGL. DEV. = 9.8 DEGREES REMARK 500 10 CYS A 180 CA - CB - SG ANGL. DEV. = 6.8 DEGREES REMARK 500 13 VAL A 181 CA - CB - CG2 ANGL. DEV. = 9.3 DEGREES REMARK 500 15 TYR A 166 CB - CG - CD2 ANGL. DEV. = -4.2 DEGREES REMARK 500 16 TYR A 188 CB - CG - CD2 ANGL. DEV. = -4.0 DEGREES REMARK 500 19 TYR A 188 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 121 67.89 -174.88 REMARK 500 1 LEU A 125 -95.98 -34.51 REMARK 500 1 MET A 134 -76.49 -38.96 REMARK 500 1 SER A 135 138.15 145.80 REMARK 500 1 PHE A 141 149.91 66.57 REMARK 500 1 ASN A 153 -108.70 70.04 REMARK 500 1 SER A 154 -45.57 32.38 REMARK 500 1 ARG A 156 6.34 -68.19 REMARK 500 1 TYR A 157 171.49 61.20 REMARK 500 1 ASN A 159 30.34 -87.53 REMARK 500 1 ARG A 169 1.95 42.76 REMARK 500 1 GLU A 173 0.71 -58.65 REMARK 500 1 GLU A 194 -57.27 -138.71 REMARK 500 1 GLN A 196 -4.14 67.79 REMARK 500 1 GLN A 200 0.58 -68.57 REMARK 500 1 LYS A 207 -65.83 -93.39 REMARK 500 2 SER A 132 -72.48 -173.98 REMARK 500 2 ALA A 133 73.98 60.34 REMARK 500 2 SER A 135 102.43 56.14 REMARK 500 2 MET A 137 151.75 61.74 REMARK 500 2 PHE A 141 179.08 58.44 REMARK 500 2 ASN A 159 39.37 -79.81 REMARK 500 2 ARG A 169 25.23 43.25 REMARK 500 2 LYS A 189 73.68 36.30 REMARK 500 2 GLN A 196 -62.13 166.81 REMARK 500 2 ASN A 197 71.12 172.17 REMARK 500 2 MET A 206 1.45 -68.59 REMARK 500 2 LYS A 207 -66.63 -92.92 REMARK 500 3 VAL A 122 106.90 49.76 REMARK 500 3 LEU A 125 118.80 77.55 REMARK 500 3 SER A 132 -67.73 61.98 REMARK 500 3 ALA A 133 84.95 51.20 REMARK 500 3 SER A 135 11.32 53.09 REMARK 500 3 PHE A 141 -171.93 49.23 REMARK 500 3 PRO A 158 -159.73 -79.70 REMARK 500 3 TYR A 166 98.94 28.96 REMARK 500 3 GLN A 196 -6.41 55.74 REMARK 500 4 VAL A 121 65.22 28.72 REMARK 500 4 SER A 135 105.61 10.91 REMARK 500 4 PHE A 141 179.99 59.25 REMARK 500 4 ASN A 153 48.26 -90.68 REMARK 500 4 SER A 154 -54.04 16.16 REMARK 500 4 ASN A 155 12.14 -163.54 REMARK 500 4 TYR A 166 -147.04 -73.77 REMARK 500 4 ASN A 167 -3.18 -141.26 REMARK 500 4 LYS A 189 73.43 42.40 REMARK 500 4 GLN A 196 12.90 56.22 REMARK 500 4 ASN A 197 34.63 -143.40 REMARK 500 5 VAL A 121 45.73 -147.38 REMARK 500 5 LEU A 125 74.85 54.03 REMARK 500 5 SER A 132 -57.18 -131.37 REMARK 500 5 ALA A 133 57.42 35.59 REMARK 500 5 SER A 135 -23.69 61.53 REMARK 500 5 PHE A 141 154.68 59.72 REMARK 500 5 ARG A 156 34.18 37.85 REMARK 500 5 TYR A 157 164.63 54.34 REMARK 500 5 ASN A 167 -15.46 70.74 REMARK 500 5 LYS A 189 90.21 48.98 REMARK 500 5 GLU A 194 -51.67 -132.75 REMARK 500 5 GLN A 196 -95.58 164.90 REMARK 500 5 ASN A 197 60.61 -172.54 REMARK 500 5 GLN A 200 0.90 -63.88 REMARK 500 6 SER A 120 64.45 32.88 REMARK 500 6 SER A 132 168.65 63.66 REMARK 500 6 SER A 135 93.35 34.99 REMARK 500 6 PHE A 141 176.33 54.31 REMARK 500 6 SER A 154 -7.30 41.07 REMARK 500 6 ASN A 155 -42.77 -164.39 REMARK 500 6 ASN A 167 4.62 47.82 REMARK 500 6 ARG A 169 49.34 22.54 REMARK 500 6 ILE A 190 -141.21 -87.03 REMARK 500 6 ASP A 191 141.47 52.60 REMARK 500 6 GLN A 196 -53.18 173.94 REMARK 500 6 ASN A 197 62.59 -174.25 REMARK 500 7 SER A 120 -113.10 -141.47 REMARK 500 7 LEU A 125 113.21 60.85 REMARK 500 7 SER A 132 -36.61 57.72 REMARK 500 7 ALA A 133 82.89 25.63 REMARK 500 7 SER A 135 -6.86 55.27 REMARK 500 7 PHE A 141 179.72 53.00 REMARK 500 7 ASN A 155 1.09 -175.76 REMARK 500 7 ARG A 169 43.99 28.69 REMARK 500 7 LYS A 189 74.72 48.61 REMARK 500 7 ILE A 190 -162.73 -120.96 REMARK 500 7 ASP A 191 139.81 74.14 REMARK 500 7 PRO A 192 35.71 -80.83 REMARK 500 7 ASN A 193 -48.18 -140.48 REMARK 500 7 GLN A 196 -69.32 171.08 REMARK 500 7 ASN A 197 -68.27 -126.53 REMARK 500 7 VAL A 198 -176.55 55.67 REMARK 500 8 SER A 135 90.80 55.90 REMARK 500 8 GLU A 152 -71.26 -67.46 REMARK 500 8 ASN A 153 34.29 -83.94 REMARK 500 8 SER A 154 9.88 -66.98 REMARK 500 8 ASN A 155 -12.57 -143.83 REMARK 500 8 ARG A 169 56.75 30.98 REMARK 500 8 ASP A 191 129.16 103.15 REMARK 500 8 ASN A 197 -12.80 -153.90 REMARK 500 8 MET A 206 0.61 -68.42 REMARK 500 8 LYS A 207 -60.11 -95.74 REMARK 500 9 LEU A 125 114.32 68.93 REMARK 500 9 SER A 135 -131.45 126.57 REMARK 500 9 MET A 137 -173.07 55.46 REMARK 500 9 ASN A 140 57.85 -152.42 REMARK 500 9 ASN A 155 -22.60 -169.42 REMARK 500 9 SER A 170 83.93 -162.30 REMARK 500 9 GLU A 173 0.25 -58.46 REMARK 500 9 ARG A 175 -60.09 -24.88 REMARK 500 9 LYS A 189 77.96 42.44 REMARK 500 9 ASN A 195 -70.47 -71.75 REMARK 500 9 GLN A 196 -73.79 -172.39 REMARK 500 9 ASN A 197 65.27 -177.70 REMARK 500 10 SER A 120 -67.77 -149.42 REMARK 500 10 SER A 132 -79.53 -140.96 REMARK 500 10 ALA A 133 63.48 36.00 REMARK 500 10 SER A 135 12.64 52.16 REMARK 500 10 PHE A 141 -171.73 61.29 REMARK 500 10 SER A 154 -67.98 59.08 REMARK 500 10 ASN A 155 40.88 -167.42 REMARK 500 10 ASN A 159 73.24 -112.06 REMARK 500 10 ARG A 169 53.41 27.70 REMARK 500 10 PRO A 172 -142.61 -78.87 REMARK 500 10 LYS A 189 82.52 48.95 REMARK 500 10 ASP A 191 134.81 68.30 REMARK 500 10 GLN A 196 -75.21 159.90 REMARK 500 10 ASN A 197 -52.77 -137.37 REMARK 500 10 VAL A 198 -161.85 52.44 REMARK 500 10 MET A 206 1.58 -68.73 REMARK 500 11 VAL A 121 -55.75 -136.12 REMARK 500 11 VAL A 122 -5.34 62.08 REMARK 500 11 LEU A 125 102.37 68.59 REMARK 500 11 SER A 132 -90.41 -154.62 REMARK 500 11 SER A 135 80.16 66.88 REMARK 500 11 PHE A 141 -175.23 57.57 REMARK 500 11 ASN A 153 7.48 -69.64 REMARK 500 11 SER A 154 36.42 -62.19 REMARK 500 11 ASN A 155 -35.91 -157.30 REMARK 500 11 ASN A 159 44.31 -76.96 REMARK 500 11 ASN A 167 -6.59 -59.41 REMARK 500 11 ARG A 169 47.87 32.83 REMARK 500 11 PRO A 172 -138.34 -78.48 REMARK 500 11 PHE A 176 -74.84 -49.36 REMARK 500 11 LYS A 189 72.49 52.13 REMARK 500 11 ASP A 191 110.74 -163.19 REMARK 500 11 MET A 206 2.89 -65.13 REMARK 500 11 LYS A 207 -65.49 -95.10 REMARK 500 12 LEU A 125 117.62 65.69 REMARK 500 12 SER A 132 -63.86 48.74 REMARK 500 12 SER A 135 154.44 59.19 REMARK 500 12 PHE A 141 -168.24 51.86 REMARK 500 12 SER A 154 -55.93 66.04 REMARK 500 12 ASN A 155 11.85 -163.47 REMARK 500 12 TYR A 166 -7.46 60.37 REMARK 500 12 ASN A 167 -38.61 79.99 REMARK 500 12 ARG A 169 41.21 -74.66 REMARK 500 12 LYS A 189 76.69 56.11 REMARK 500 12 ASP A 191 120.05 102.79 REMARK 500 12 PRO A 192 2.86 -69.74 REMARK 500 12 GLU A 194 -33.94 -131.99 REMARK 500 12 GLN A 196 18.68 58.24 REMARK 500 12 MET A 206 0.51 -64.47 REMARK 500 12 LEU A 223 -70.27 -79.09 REMARK 500 13 LEU A 125 72.55 51.16 REMARK 500 13 SER A 132 -65.91 -157.51 REMARK 500 13 SER A 135 166.63 52.14 REMARK 500 13 PHE A 141 166.38 60.00 REMARK 500 13 GLU A 152 37.80 -79.77 REMARK 500 13 ASN A 155 29.34 -175.69 REMARK 500 13 ASN A 167 -61.34 -98.29 REMARK 500 13 ASP A 191 126.97 88.81 REMARK 500 13 GLU A 194 -57.39 -153.38 REMARK 500 13 GLN A 196 -10.01 52.29 REMARK 500 13 MET A 206 0.54 -68.14 REMARK 500 13 MET A 213 1.04 -66.87 REMARK 500 14 SER A 120 97.65 -160.11 REMARK 500 14 LEU A 125 71.13 54.68 REMARK 500 14 SER A 132 -88.86 -162.79 REMARK 500 14 SER A 135 12.35 52.48 REMARK 500 14 ARG A 169 36.33 35.36 REMARK 500 14 LYS A 189 74.92 46.86 REMARK 500 14 GLN A 196 17.57 50.77 REMARK 500 14 MET A 206 1.57 -66.44 REMARK 500 15 LEU A 125 109.23 70.73 REMARK 500 15 SER A 135 97.48 68.69 REMARK 500 15 MET A 137 -174.17 -69.47 REMARK 500 15 PHE A 141 162.45 54.80 REMARK 500 15 ASN A 155 30.04 -145.63 REMARK 500 15 LYS A 164 99.05 -68.67 REMARK 500 15 ARG A 169 51.27 35.53 REMARK 500 15 SER A 170 81.28 -156.88 REMARK 500 15 GLU A 173 -0.19 -53.05 REMARK 500 15 LYS A 189 73.96 43.26 REMARK 500 15 GLN A 196 62.31 30.45 REMARK 500 15 ASN A 197 -42.59 -155.18 REMARK 500 16 SER A 120 -43.44 -154.01 REMARK 500 16 VAL A 121 -55.08 -134.17 REMARK 500 16 VAL A 122 -178.33 60.04 REMARK 500 16 LEU A 125 113.12 52.19 REMARK 500 16 SER A 132 -64.85 58.40 REMARK 500 16 ALA A 133 88.43 52.53 REMARK 500 16 GLU A 152 -61.55 -97.31 REMARK 500 16 ASN A 153 -75.26 141.07 REMARK 500 16 SER A 154 -73.43 49.80 REMARK 500 16 ARG A 156 57.33 37.87 REMARK 500 16 TYR A 157 156.01 -43.17 REMARK 500 16 ARG A 169 48.18 28.67 REMARK 500 16 GLU A 173 -10.59 -48.24 REMARK 500 16 GLN A 196 -57.06 -175.71 REMARK 500 16 ASN A 197 73.76 163.62 REMARK 500 17 LEU A 125 126.44 60.93 REMARK 500 17 SER A 132 -58.45 -178.42 REMARK 500 17 ALA A 133 68.31 37.99 REMARK 500 17 SER A 135 96.55 50.50 REMARK 500 17 SER A 154 -17.17 -145.72 REMARK 500 17 ASN A 159 56.95 -114.35 REMARK 500 17 ARG A 169 50.10 30.30 REMARK 500 17 GLN A 196 10.66 57.33 REMARK 500 17 MET A 206 2.51 -66.03 REMARK 500 18 SER A 120 -154.56 -156.58 REMARK 500 18 LEU A 125 102.53 61.89 REMARK 500 18 SER A 132 -138.44 -149.17 REMARK 500 18 ALA A 133 54.74 104.55 REMARK 500 18 SER A 135 97.76 25.09 REMARK 500 18 PHE A 141 -174.83 56.88 REMARK 500 18 GLU A 152 -78.55 -73.66 REMARK 500 18 SER A 154 3.78 -169.43 REMARK 500 18 ASN A 159 54.75 -106.08 REMARK 500 18 LYS A 164 -134.95 39.37 REMARK 500 18 ARG A 169 27.28 41.70 REMARK 500 18 PRO A 172 -162.34 -76.52 REMARK 500 18 ASP A 191 133.70 176.22 REMARK 500 18 ASN A 197 -1.29 -145.66 REMARK 500 18 MET A 206 0.69 -68.97 REMARK 500 19 SER A 120 166.12 58.27 REMARK 500 19 VAL A 121 146.76 67.25 REMARK 500 19 VAL A 122 -165.25 45.61 REMARK 500 19 LEU A 125 116.41 60.88 REMARK 500 19 SER A 132 -82.20 121.66 REMARK 500 19 SER A 135 118.68 69.92 REMARK 500 19 PHE A 141 -16.67 59.08 REMARK 500 19 ASP A 142 4.44 54.70 REMARK 500 19 SER A 154 -29.26 -147.84 REMARK 500 19 ARG A 169 18.82 47.85 REMARK 500 19 LYS A 189 63.59 60.73 REMARK 500 19 GLN A 196 25.63 47.59 REMARK 500 19 MET A 213 0.72 -69.53 REMARK 500 20 SER A 120 79.99 53.37 REMARK 500 20 LEU A 125 -133.70 -97.25 REMARK 500 20 SER A 135 100.19 49.32 REMARK 500 20 PHE A 141 137.09 -14.33 REMARK 500 20 ASN A 155 -1.80 -174.42 REMARK 500 20 PRO A 158 -172.55 -69.92 REMARK 500 20 ASP A 168 68.05 -103.40 REMARK 500 20 ARG A 169 79.81 -47.14 REMARK 500 20 SER A 170 24.11 -159.96 REMARK 500 20 ILE A 190 -149.37 -115.28 REMARK 500 20 ASP A 191 131.87 70.16 REMARK 500 20 GLU A 194 -45.80 -132.97 REMARK 500 20 GLN A 196 -39.27 157.97 REMARK 500 20 ASN A 197 124.90 169.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 224 SER A 225 11 -148.51 REMARK 500 GLY A 136 MET A 137 12 -147.46 REMARK 500 VAL A 171 PRO A 172 17 149.00 REMARK 500 LYS A 164 GLU A 165 18 145.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 TYR A 163 0.06 SIDE_CHAIN REMARK 500 1 ARG A 178 0.11 SIDE_CHAIN REMARK 500 2 TYR A 166 0.08 SIDE_CHAIN REMARK 500 2 TYR A 188 0.07 SIDE_CHAIN REMARK 500 3 ARG A 169 0.13 SIDE_CHAIN REMARK 500 3 TYR A 221 0.07 SIDE_CHAIN REMARK 500 5 TYR A 218 0.07 SIDE_CHAIN REMARK 500 5 TYR A 221 0.09 SIDE_CHAIN REMARK 500 6 TYR A 166 0.09 SIDE_CHAIN REMARK 500 7 TYR A 166 0.08 SIDE_CHAIN REMARK 500 7 ARG A 169 0.08 SIDE_CHAIN REMARK 500 7 ARG A 178 0.09 SIDE_CHAIN REMARK 500 7 TYR A 218 0.07 SIDE_CHAIN REMARK 500 8 ARG A 156 0.12 SIDE_CHAIN REMARK 500 8 TYR A 163 0.07 SIDE_CHAIN REMARK 500 9 TYR A 221 0.09 SIDE_CHAIN REMARK 500 10 TYR A 163 0.07 SIDE_CHAIN REMARK 500 10 ARG A 169 0.10 SIDE_CHAIN REMARK 500 10 TYR A 218 0.09 SIDE_CHAIN REMARK 500 11 ARG A 143 0.08 SIDE_CHAIN REMARK 500 11 TYR A 157 0.09 SIDE_CHAIN REMARK 500 12 TYR A 163 0.08 SIDE_CHAIN REMARK 500 12 ARG A 204 0.11 SIDE_CHAIN REMARK 500 13 TYR A 128 0.08 SIDE_CHAIN REMARK 500 13 ARG A 147 0.10 SIDE_CHAIN REMARK 500 15 TYR A 221 0.11 SIDE_CHAIN REMARK 500 16 ARG A 147 0.07 SIDE_CHAIN REMARK 500 16 TYR A 218 0.07 SIDE_CHAIN REMARK 500 16 TYR A 221 0.11 SIDE_CHAIN REMARK 500 17 TYR A 128 0.09 SIDE_CHAIN REMARK 500 17 ARG A 147 0.11 SIDE_CHAIN REMARK 500 17 TYR A 218 0.06 SIDE_CHAIN REMARK 500 19 TYR A 128 0.07 SIDE_CHAIN REMARK 500 19 ARG A 147 0.08 SIDE_CHAIN REMARK 500 20 TYR A 162 0.09 SIDE_CHAIN REMARK 500 20 TYR A 166 0.07 SIDE_CHAIN REMARK 500 20 TYR A 218 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL

DBREF 1U5L A 121 226 UNP Q9I9C0 Q9I9C0_TRASC 143 248

SEQADV 1U5L GLY A 119 UNP Q9I9C0 CLONING ARTIFACT SEQADV 1U5L SER A 120 UNP Q9I9C0 CLONING ARTIFACT SEQADV 1U5L VAL A 181 UNP Q9I9C0 LEU 203 SEE REMARK 999 SEQADV 1U5L ILE A 183 UNP Q9I9C0 ASN 205 SEE REMARK 999

SEQRES 1 A 108 GLY SER VAL VAL GLY GLY LEU GLY GLY TYR ALA LEU GLY SEQRES 2 A 108 SER ALA MET SER GLY MET ARG MET ASN PHE ASP ARG PRO SEQRES 3 A 108 GLU GLU ARG GLN TRP TRP ASN GLU ASN SER ASN ARG TYR SEQRES 4 A 108 PRO ASN GLN VAL TYR TYR LYS GLU TYR ASN ASP ARG SER SEQRES 5 A 108 VAL PRO GLU GLY ARG PHE VAL ARG ASP CYS VAL ASN ILE SEQRES 6 A 108 THR VAL THR GLU TYR LYS ILE ASP PRO ASN GLU ASN GLN SEQRES 7 A 108 ASN VAL THR GLN VAL GLU VAL ARG VAL MET LYS GLN VAL SEQRES 8 A 108 ILE GLN GLU MET CYS MET GLN GLN TYR GLN GLN TYR GLN SEQRES 9 A 108 LEU ALA SER GLY

HELIX 1 1 ARG A 143 ASN A 153 1 11 HELIX 2 2 GLY A 174 TYR A 188 1 15 HELIX 3 3 THR A 199 SER A 225 1 27

SHEET 1 A 2 ALA A 129 LEU A 130 0 SHEET 2 A 2 TYR A 162 TYR A 163 -1 O TYR A 163 N ALA A 129

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000