10 20 30 40 50 60 70 80 1U3O - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SIGNALING PROTEIN 22-JUL-04 1U3O
TITLE SOLUTION STRUCTURE OF RAT KALIRIN N-TERMINAL SH3 DOMAIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HUNTINGTIN-ASSOCIATED PROTEIN-INTERACTING COMPND 3 PROTEIN; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: SH3 DOMAIN; COMPND 6 SYNONYM: DUO PROTEIN, KALIRIN, PAM COOH-TERMINAL COMPND 7 INTERACTOR PROTEIN 10, P-CIP10; COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 ORGAN: BRAIN; SOURCE 6 GENE: KALIRIN, HAPIP, DUO; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PGEX6P
KEYWDS SH3, CIS-PROLINE,, SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.R.SCHILLER,K.CHAKRABARTI,G.F.KING,N.I.SCHILLER,B.A.EIPPER, AUTHOR 2 M.W.MACIEJEWSKI
REVDAT 3 24-FEB-09 1U3O 1 VERSN REVDAT 2 18-JUL-06 1U3O 1 JRNL REVDAT 1 26-JUL-05 1U3O 0
JRNL AUTH M.R.SCHILLER,K.CHAKRABARTI,G.F.KING,N.I.SCHILLER, JRNL AUTH 2 B.A.EIPPER,M.W.MACIEJEWSKI JRNL TITL REGULATION OF RHOGEF ACTIVITY BY INTRAMOLECULAR JRNL TITL 2 AND INTERMOLECULAR SH3 DOMAIN INTERACTIONS. JRNL REF J.BIOL.CHEM. V. 281 18774 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16644733 JRNL DOI 10.1074/JBC.M512482200
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER, A.T. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE IS BASED ON A TOTAL OF REMARK 3 1017 RESTRAINTS, WITH 893 NOE-DERIVED DISTANCE CONSTRAINTS, REMARK 3 102 DIHEDRAL ANGLE RESTRAINTS, AND 22 HYDROGEN BOND RESTRAINTS.
REMARK 4 REMARK 4 1U3O COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUL-04. REMARK 100 THE RCSB ID CODE IS RCSB023204.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.4 REMARK 210 IONIC STRENGTH : 200 MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.4 MM U-15N PROTEIN, 50 MM REMARK 210 HEPES, 150 MM NACL, 1 MM REMARK 210 DITHIOTHEITOL, 92.5% H2O, 7.5% REMARK 210 D2O; 1 MM U-15N,13C PROTEIN, REMARK 210 50 MM HEPES, 150 MM NACL, 1 MM REMARK 210 DITHIOTHEITOL, 92.5% H2O, 7.5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : HNHA, HNHB, 3D_HN(CO)CACB, REMARK 210 3D_C(CO)NH-TOCSY, 3D_15N_ REMARK 210 NOESY-HSQC, 3D_13C_HSQC-NOESY, REMARK 210 3D_HNCACB, HC(CO)NH-TOCSY, REMARK 210 HCCH-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA 1.5, CYANA 1.0.0, REMARK 210 NMRPIPE 2.3, XEASY 1.4, TALOS REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS AND REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 PRO A 2 REMARK 465 LEU A 3 REMARK 465 GLY A 4 REMARK 465 SER A 5 REMARK 465 PRO A 6 REMARK 465 GLY A 7 REMARK 465 ILE A 8 REMARK 465 PRO A 9 REMARK 465 GLY A 10 REMARK 465 SER A 11 REMARK 465 THR A 12 REMARK 465 LEU A 13 REMARK 465 ARG A 81 REMARK 465 SER A 82
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 28 -175.61 -49.38 REMARK 500 1 ALA A 29 -34.22 177.40 REMARK 500 1 SER A 32 37.77 -92.19 REMARK 500 1 GLU A 46 -154.19 -126.39 REMARK 500 1 PRO A 65 170.27 -52.20 REMARK 500 1 HIS A 79 121.72 62.88 REMARK 500 2 ALA A 28 -177.23 -48.13 REMARK 500 2 ALA A 29 -29.55 170.97 REMARK 500 2 SER A 31 -80.31 -38.46 REMARK 500 2 SER A 32 44.58 -94.10 REMARK 500 2 GLU A 46 -154.83 -130.33 REMARK 500 2 PRO A 65 167.84 -48.52 REMARK 500 3 ALA A 28 -176.88 -49.14 REMARK 500 3 ALA A 29 -30.86 178.49 REMARK 500 3 SER A 31 -80.21 -35.75 REMARK 500 3 SER A 32 42.55 -88.78 REMARK 500 3 GLU A 46 -154.80 -132.42 REMARK 500 3 PRO A 48 59.88 -67.51 REMARK 500 3 PRO A 65 165.06 -44.03 REMARK 500 3 SER A 78 78.20 59.96 REMARK 500 4 ALA A 28 -176.43 -48.58 REMARK 500 4 ALA A 29 -32.05 170.55 REMARK 500 4 SER A 32 37.71 -96.94 REMARK 500 4 PRO A 48 76.53 -57.18 REMARK 500 4 PRO A 65 164.23 -44.05 REMARK 500 4 ILE A 77 -41.70 -133.00 REMARK 500 4 SER A 78 98.93 59.54 REMARK 500 5 ALA A 28 -176.01 -49.35 REMARK 500 5 ALA A 29 -32.01 173.61 REMARK 500 5 SER A 32 42.06 -92.19 REMARK 500 5 GLU A 46 -156.03 -131.83 REMARK 500 5 PRO A 48 73.86 -62.02 REMARK 500 5 PRO A 65 160.91 -44.21 REMARK 500 5 SER A 78 39.63 -151.62 REMARK 500 5 HIS A 79 -67.27 -167.39 REMARK 500 6 ALA A 28 -176.05 -50.05 REMARK 500 6 ALA A 29 -30.10 170.34 REMARK 500 6 SER A 31 -76.47 -41.60 REMARK 500 6 SER A 32 44.15 -92.26 REMARK 500 6 GLU A 46 -154.19 -127.66 REMARK 500 6 PRO A 65 167.09 -45.66 REMARK 500 6 HIS A 79 85.86 60.17 REMARK 500 7 ALA A 28 -176.25 -49.29 REMARK 500 7 ALA A 29 -30.04 169.94 REMARK 500 7 SER A 31 -76.33 -41.80 REMARK 500 7 SER A 32 43.14 -91.94 REMARK 500 7 PRO A 48 63.49 -66.21 REMARK 500 7 PRO A 65 165.22 -48.89 REMARK 500 7 SER A 78 96.36 60.63 REMARK 500 8 ALA A 28 -177.60 -48.50 REMARK 500 8 ALA A 29 -31.51 174.68 REMARK 500 8 SER A 31 -78.55 -39.87 REMARK 500 8 SER A 32 40.58 -92.98 REMARK 500 8 GLU A 46 -159.57 -120.52 REMARK 500 8 PRO A 48 72.82 -62.96 REMARK 500 8 PRO A 65 164.37 -47.59 REMARK 500 8 HIS A 79 139.54 63.26 REMARK 500 9 ALA A 28 -175.26 -49.10 REMARK 500 9 ALA A 29 -35.15 177.89 REMARK 500 9 SER A 32 35.41 -93.39 REMARK 500 9 PRO A 48 63.30 -66.66 REMARK 500 9 PRO A 65 165.54 -43.42 REMARK 500 10 ALA A 28 -177.00 -48.66 REMARK 500 10 ALA A 29 -32.48 175.11 REMARK 500 10 SER A 31 -72.02 -44.52 REMARK 500 10 SER A 32 41.12 -91.96 REMARK 500 10 GLU A 46 -157.18 -128.59 REMARK 500 10 PRO A 48 62.40 -67.71 REMARK 500 10 PRO A 65 170.24 -52.02 REMARK 500 10 SER A 78 126.31 -176.80 REMARK 500 11 ALA A 28 -176.14 -49.70 REMARK 500 11 ALA A 29 -31.09 172.87 REMARK 500 11 SER A 31 -77.23 -41.05 REMARK 500 11 SER A 32 43.75 -92.22 REMARK 500 11 PRO A 48 61.46 -66.00 REMARK 500 11 PRO A 65 170.22 -53.28 REMARK 500 11 SER A 78 -174.70 64.80 REMARK 500 11 HIS A 79 77.64 61.00 REMARK 500 12 ALA A 28 -176.06 -48.92 REMARK 500 12 ALA A 29 -30.41 171.91 REMARK 500 12 SER A 31 -78.54 -40.34 REMARK 500 12 SER A 32 43.21 -92.34 REMARK 500 12 GLU A 46 -153.33 -132.49 REMARK 500 12 PRO A 48 61.94 -65.27 REMARK 500 12 PRO A 65 168.57 -49.45 REMARK 500 12 HIS A 79 110.66 60.37 REMARK 500 13 ALA A 28 -176.31 -50.18 REMARK 500 13 ALA A 29 -31.16 178.85 REMARK 500 13 SER A 31 -80.05 -35.23 REMARK 500 13 SER A 32 41.90 -89.22 REMARK 500 13 GLU A 46 -152.75 -131.32 REMARK 500 13 PRO A 65 166.76 -43.00 REMARK 500 13 SER A 78 -54.93 -144.17 REMARK 500 14 ALA A 28 -175.91 -49.80 REMARK 500 14 ALA A 29 -30.62 171.92 REMARK 500 14 SER A 31 -76.74 -41.54 REMARK 500 14 SER A 32 44.06 -92.06 REMARK 500 14 GLU A 46 -154.81 -129.68 REMARK 500 14 PRO A 48 60.65 -66.66 REMARK 500 14 PRO A 65 170.61 -49.37 REMARK 500 14 HIS A 79 159.14 63.47 REMARK 500 15 ALA A 28 -176.74 -48.92 REMARK 500 15 ALA A 29 -29.27 170.36 REMARK 500 15 SER A 31 -77.31 -39.70 REMARK 500 15 SER A 32 46.55 -94.56 REMARK 500 15 GLU A 46 -152.78 -128.31 REMARK 500 15 PRO A 48 39.26 -84.52 REMARK 500 15 PRO A 65 170.87 -53.02 REMARK 500 16 ALA A 28 -175.53 -49.98 REMARK 500 16 ALA A 29 -31.58 172.64 REMARK 500 16 SER A 32 42.66 -91.82 REMARK 500 16 PRO A 65 161.08 -44.42 REMARK 500 17 ALA A 28 -176.45 -49.71 REMARK 500 17 ALA A 29 -30.64 171.29 REMARK 500 17 SER A 31 -71.92 -44.44 REMARK 500 17 SER A 32 44.03 -91.87 REMARK 500 17 PRO A 65 160.96 -44.52 REMARK 500 18 ALA A 28 -175.84 -49.14 REMARK 500 18 ALA A 29 -34.77 176.77 REMARK 500 18 SER A 32 35.17 -93.39 REMARK 500 18 PRO A 65 159.34 -48.36 REMARK 500 18 HIS A 79 73.63 60.68 REMARK 500 19 ALA A 28 -175.84 -49.78 REMARK 500 19 ALA A 29 -31.45 171.68 REMARK 500 19 SER A 32 42.39 -91.92 REMARK 500 19 GLU A 46 -156.47 -137.54 REMARK 500 19 PRO A 48 73.77 -61.27 REMARK 500 19 PRO A 65 160.82 -44.78 REMARK 500 19 SER A 78 -174.04 61.08 REMARK 500 19 HIS A 79 36.65 -154.54 REMARK 500 20 ALA A 28 -175.18 -50.26 REMARK 500 20 ALA A 29 -30.13 170.44 REMARK 500 20 SER A 31 -74.44 -43.11 REMARK 500 20 SER A 32 44.75 -91.34 REMARK 500 20 GLU A 46 -153.09 -129.70 REMARK 500 20 PRO A 48 62.70 -67.75 REMARK 500 20 PRO A 65 161.08 -44.23 REMARK 500 20 SER A 78 -79.55 63.32 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1U3O A 13 82 UNP P97924 HAPIP_RAT 1637 1706
SEQADV 1U3O GLY A 1 UNP P97924 CLONING ARTIFACT SEQADV 1U3O PRO A 2 UNP P97924 CLONING ARTIFACT SEQADV 1U3O LEU A 3 UNP P97924 CLONING ARTIFACT SEQADV 1U3O GLY A 4 UNP P97924 CLONING ARTIFACT SEQADV 1U3O SER A 5 UNP P97924 CLONING ARTIFACT SEQADV 1U3O PRO A 6 UNP P97924 CLONING ARTIFACT SEQADV 1U3O GLY A 7 UNP P97924 CLONING ARTIFACT SEQADV 1U3O ILE A 8 UNP P97924 CLONING ARTIFACT SEQADV 1U3O PRO A 9 UNP P97924 CLONING ARTIFACT SEQADV 1U3O GLY A 10 UNP P97924 CLONING ARTIFACT SEQADV 1U3O SER A 11 UNP P97924 CLONING ARTIFACT SEQADV 1U3O THR A 12 UNP P97924 CLONING ARTIFACT
SEQRES 1 A 82 GLY PRO LEU GLY SER PRO GLY ILE PRO GLY SER THR LEU SEQRES 2 A 82 SER GLY GLY CYS GLU LEU THR VAL VAL LEU GLN ASP PHE SEQRES 3 A 82 SER ALA ALA HIS SER SER GLU LEU SER ILE GLN VAL GLY SEQRES 4 A 82 GLN THR VAL GLU LEU LEU GLU ARG PRO SER GLU ARG PRO SEQRES 5 A 82 GLY TRP CYS LEU VAL ARG THR THR GLU ARG SER PRO PRO SEQRES 6 A 82 GLN GLU GLY LEU VAL PRO SER SER THR LEU CYS ILE SER SEQRES 7 A 82 HIS SER ARG SER
HELIX 1 1 SER A 73 LEU A 75 5 3
SHEET 1 A 2 GLU A 18 VAL A 21 0 SHEET 2 A 2 THR A 41 LEU A 44 -1 O VAL A 42 N THR A 20 SHEET 1 B 2 TRP A 54 THR A 59 0 SHEET 2 B 2 GLN A 66 PRO A 71 -1 O VAL A 70 N CYS A 55
CISPEP 1 SER A 63 PRO A 64 1 0.15 CISPEP 2 SER A 63 PRO A 64 2 0.12 CISPEP 3 SER A 63 PRO A 64 3 0.17 CISPEP 4 SER A 63 PRO A 64 4 0.11 CISPEP 5 SER A 63 PRO A 64 5 -0.03 CISPEP 6 SER A 63 PRO A 64 6 0.01 CISPEP 7 SER A 63 PRO A 64 7 0.08 CISPEP 8 SER A 63 PRO A 64 8 0.02 CISPEP 9 SER A 63 PRO A 64 9 0.22 CISPEP 10 SER A 63 PRO A 64 10 0.36 CISPEP 11 SER A 63 PRO A 64 11 0.37 CISPEP 12 SER A 63 PRO A 64 12 0.01 CISPEP 13 SER A 63 PRO A 64 13 0.21 CISPEP 14 SER A 63 PRO A 64 14 0.18 CISPEP 15 SER A 63 PRO A 64 15 0.28 CISPEP 16 SER A 63 PRO A 64 16 0.05 CISPEP 17 SER A 63 PRO A 64 17 -0.09 CISPEP 18 SER A 63 PRO A 64 18 -0.02 CISPEP 19 SER A 63 PRO A 64 19 0.10 CISPEP 20 SER A 63 PRO A 64 20 0.11
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000