10 20 30 40 50 60 70 80 1U37 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN TRANSPORT 21-JUL-04 1U37
TITLE AUTO-INHIBITION MECHANISM OF X11S/MINTS FAMILY SCAFFOLD TITLE 2 PROTEINS REVEALED BY THE CLOSED CONFORMATION OF THE TANDEM TITLE 3 PDZ DOMAINS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING, COMPND 3 FAMILY A, MEMBER 1; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: PDZ1 DOMAIN; COMPND 6 SYNONYM: X11ALPHA/MINT1, PHOSPHOTYROSINE-BINDING/- COMPND 7 INTERACTING DOMAIN (PTB)-BEARING PROTEIN, NEURONAL MUNC18- COMPND 8 1-INTERACTING PROTEIN 1, NEURON-SPECIFIC X11 PROTEIN, COMPND 9 ADAPTOR PROTEIN X11ALPHA; COMPND 10 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET32A
KEYWDS X11S/MINTS, PDZ DOMAIN, SCAFFOLD PROTEIN, PROTEIN KEYWDS 2 TRAFFICKING, PROTEIN TRANSPORT
EXPDTA SOLUTION NMR
NUMMDL 20
MDLTYP MINIMIZED AVERAGE
AUTHOR W.FENG,J.-F.LONG,L.-N.CHAN,C.HE,A.FU,J.XIA,N.Y.IP,M.ZHANG
REVDAT 3 24-FEB-09 1U37 1 VERSN REVDAT 2 13-SEP-05 1U37 1 JRNL REVDAT 1 26-JUL-05 1U37 0
JRNL AUTH J.-F.LONG,W.FENG,R.WANG,L.-N.CHAN,F.C.IP,J.XIA, JRNL AUTH 2 N.Y.IP,M.ZHANG JRNL TITL AUTOINHIBITION OF X11/MINT SCAFFOLD PROTEINS JRNL TITL 2 REVEALED BY THE CLOSED CONFORMATION OF THE PDZ JRNL TITL 3 TANDEM JRNL REF NAT.STRUCT.MOL.BIOL. V. 12 722 2005 JRNL REFN ISSN 1545-9993 JRNL PMID 16007100 JRNL DOI 10.1038/NSMB958
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER, A.T. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1U37 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JUL-04. REMARK 100 THE RCSB ID CODE IS RCSB023187.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100MM POTASSIUM PHOSPHATE REMARK 210 PRESSURE : 1ATM REMARK 210 SAMPLE CONTENTS : 1.0MM UNLABELLED PDZ1 IN REMARK 210 99.9% D2O; 100MM POTASSIUM REMARK 210 PHOSPHATE; 1.0MM UNIFORMLY 15N REMARK 210 LABELLED PDZ1 IN 90% H2O, 10% REMARK 210 D2O; 100MM POTASSIUM REMARK 210 PHOSPHATE; 1.0MM UNIFORMLY REMARK 210 15N/13C LABELLED PDZ1 IN 90% REMARK 210 H2O, 10% D2O; 100MM POTASSIUM REMARK 210 PHOSPHATE; 1.0MM UNIFORMLY REMARK 210 15N/13C LABELLED PDZ1 IN 99.9% REMARK 210 D2O; 100MM POTASSIUM PHOSPHATE REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 3D_15N-SEPARATED_ REMARK 210 NOESY, HNCO, HNCACB, CBCA(CO) REMARK 210 NH, 3D_13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 37 95.83 -55.96 REMARK 500 1 TRP A 40 -179.74 -66.49 REMARK 500 1 ILE A 43 -169.85 45.55 REMARK 500 1 THR A 46 -61.78 -162.50 REMARK 500 1 ILE A 49 71.53 -61.42 REMARK 500 1 HIS A 54 75.38 -66.93 REMARK 500 1 ILE A 66 114.56 -13.61 REMARK 500 1 ASN A 74 26.99 49.36 REMARK 500 1 PRO A 82 -176.37 -63.86 REMARK 500 1 LEU A 93 36.29 -93.16 REMARK 500 1 ASN A 95 61.38 -116.82 REMARK 500 1 SER A 97 -19.07 90.16 REMARK 500 2 ILE A 43 -177.26 49.33 REMARK 500 2 THR A 46 -71.77 -148.91 REMARK 500 2 ILE A 49 71.36 -63.49 REMARK 500 2 MET A 52 129.51 -171.86 REMARK 500 2 LYS A 63 -47.71 -136.39 REMARK 500 2 ILE A 66 114.91 -36.74 REMARK 500 2 ASN A 74 29.14 45.98 REMARK 500 2 LEU A 93 38.47 -91.24 REMARK 500 2 SER A 97 -10.79 81.49 REMARK 500 3 ILE A 43 -168.07 44.72 REMARK 500 3 THR A 46 -62.42 -170.69 REMARK 500 3 ILE A 49 70.81 -61.42 REMARK 500 3 HIS A 54 75.53 -67.42 REMARK 500 3 ILE A 66 116.09 -35.14 REMARK 500 3 VAL A 79 109.26 -59.54 REMARK 500 3 LEU A 93 41.51 -92.51 REMARK 500 3 ASN A 95 61.71 -116.74 REMARK 500 3 SER A 97 -18.51 91.29 REMARK 500 4 THR A 46 -64.69 -170.30 REMARK 500 4 ILE A 49 70.64 -62.59 REMARK 500 4 HIS A 54 103.39 -55.41 REMARK 500 4 ILE A 66 126.20 -38.01 REMARK 500 4 ASN A 74 34.76 36.42 REMARK 500 4 VAL A 79 107.05 -55.94 REMARK 500 4 LEU A 93 38.94 -99.56 REMARK 500 5 ILE A 43 -166.90 44.98 REMARK 500 5 THR A 46 -74.27 -144.82 REMARK 500 5 ILE A 49 72.55 -62.21 REMARK 500 5 HIS A 54 90.86 -56.88 REMARK 500 5 ILE A 66 107.43 -37.86 REMARK 500 5 ASN A 74 29.82 45.88 REMARK 500 5 PRO A 82 170.43 -54.81 REMARK 500 5 LEU A 93 37.82 -93.83 REMARK 500 6 THR A 46 -64.85 -175.14 REMARK 500 6 ILE A 49 72.33 -61.10 REMARK 500 6 MET A 53 98.70 -54.00 REMARK 500 6 ILE A 66 113.03 -30.61 REMARK 500 6 PRO A 82 -176.05 -52.03 REMARK 500 6 LEU A 93 39.86 -93.17 REMARK 500 6 SER A 97 -2.12 76.68 REMARK 500 7 THR A 46 -72.36 -141.14 REMARK 500 7 ILE A 49 72.66 -60.98 REMARK 500 7 MET A 52 117.86 -166.77 REMARK 500 7 ILE A 66 114.98 -28.38 REMARK 500 7 ASN A 74 29.04 46.97 REMARK 500 7 LEU A 93 46.84 -88.15 REMARK 500 8 LEU A 44 109.21 -55.72 REMARK 500 8 THR A 46 -70.69 -135.98 REMARK 500 8 ILE A 49 70.64 -64.75 REMARK 500 8 ILE A 66 124.78 -34.76 REMARK 500 8 PRO A 82 -174.98 -52.04 REMARK 500 8 LEU A 93 43.68 -90.93 REMARK 500 8 ASN A 95 57.56 -112.47 REMARK 500 9 GLU A 37 93.07 -53.14 REMARK 500 9 SER A 38 83.51 -61.58 REMARK 500 9 SER A 42 142.02 -176.81 REMARK 500 9 ILE A 43 178.76 51.44 REMARK 500 9 THR A 46 -66.67 -141.59 REMARK 500 9 ILE A 49 72.54 -62.60 REMARK 500 9 ILE A 66 131.03 -37.09 REMARK 500 9 ASN A 74 28.25 48.30 REMARK 500 9 PRO A 82 -176.34 -52.34 REMARK 500 9 LEU A 93 37.49 -93.92 REMARK 500 10 THR A 46 -72.19 -142.01 REMARK 500 10 ILE A 49 73.61 -61.52 REMARK 500 10 MET A 52 144.34 -173.10 REMARK 500 10 HIS A 54 87.80 -61.00 REMARK 500 10 ILE A 66 108.25 -39.44 REMARK 500 10 VAL A 79 103.40 -58.66 REMARK 500 10 LEU A 93 31.81 -91.23 REMARK 500 10 ASN A 95 62.56 -118.74 REMARK 500 10 SER A 97 -2.57 78.90 REMARK 500 11 THR A 46 -67.53 -155.83 REMARK 500 11 ILE A 49 74.36 -61.86 REMARK 500 11 MET A 52 128.93 -171.55 REMARK 500 11 ILE A 66 109.25 -36.38 REMARK 500 11 LEU A 93 33.67 -93.69 REMARK 500 12 TRP A 40 -169.84 -113.65 REMARK 500 12 ILE A 43 -168.96 45.68 REMARK 500 12 THR A 46 -58.89 -159.45 REMARK 500 12 ILE A 49 72.43 -60.27 REMARK 500 12 HIS A 54 83.16 -62.77 REMARK 500 12 LEU A 93 37.36 -94.06 REMARK 500 12 SER A 97 -2.34 77.62 REMARK 500 13 LEU A 44 109.16 -57.45 REMARK 500 13 THR A 46 -75.04 -142.85 REMARK 500 13 ILE A 49 73.25 -64.18 REMARK 500 13 ASN A 95 62.70 -119.79 REMARK 500 13 SER A 97 -3.24 79.55 REMARK 500 14 LYS A 25 -169.63 -129.89 REMARK 500 14 SER A 38 97.36 -61.61 REMARK 500 14 THR A 46 -66.20 -156.41 REMARK 500 14 ILE A 49 71.26 -60.54 REMARK 500 14 ASN A 51 145.00 -177.46 REMARK 500 14 HIS A 54 81.28 -64.00 REMARK 500 14 ASN A 95 62.43 -119.83 REMARK 500 14 SER A 97 -2.06 79.46 REMARK 500 15 LEU A 44 109.12 -57.14 REMARK 500 15 THR A 46 -59.82 -158.02 REMARK 500 15 ILE A 49 71.85 -62.70 REMARK 500 15 ILE A 66 122.36 -33.34 REMARK 500 15 ASN A 74 29.56 46.13 REMARK 500 15 SER A 97 -0.55 77.95 REMARK 500 16 GLU A 37 93.68 -54.79 REMARK 500 16 ILE A 43 -171.05 45.72 REMARK 500 16 THR A 46 -73.81 -141.64 REMARK 500 16 ILE A 49 72.42 -62.83 REMARK 500 16 MET A 52 131.78 -171.76 REMARK 500 16 LYS A 63 -52.70 -121.12 REMARK 500 16 ILE A 66 117.07 -32.40 REMARK 500 16 ASN A 74 29.23 46.29 REMARK 500 16 PRO A 82 -179.58 -68.27 REMARK 500 17 ILE A 43 -174.01 47.96 REMARK 500 17 THR A 46 -60.48 -163.73 REMARK 500 17 ILE A 49 74.04 -63.25 REMARK 500 17 MET A 52 122.71 -170.85 REMARK 500 17 ILE A 66 110.50 -37.17 REMARK 500 17 ASN A 74 28.74 46.46 REMARK 500 17 LEU A 93 38.28 -91.93 REMARK 500 17 SER A 97 -4.14 77.58 REMARK 500 18 SER A 38 84.66 -61.34 REMARK 500 18 SER A 42 147.26 -174.68 REMARK 500 18 ILE A 43 -167.58 44.83 REMARK 500 18 THR A 46 -62.78 -161.80 REMARK 500 18 ILE A 49 72.68 -60.17 REMARK 500 18 MET A 52 125.41 -171.66 REMARK 500 18 ILE A 66 113.70 -33.69 REMARK 500 18 ASN A 74 28.34 48.01 REMARK 500 18 LEU A 93 31.70 -99.57 REMARK 500 19 THR A 46 -61.76 -168.27 REMARK 500 19 ILE A 49 71.58 -61.38 REMARK 500 19 ASN A 74 27.89 48.59 REMARK 500 19 PRO A 82 -174.41 -61.19 REMARK 500 20 LEU A 44 108.64 -56.85 REMARK 500 20 THR A 46 -72.68 -130.62 REMARK 500 20 ILE A 49 74.91 -63.56 REMARK 500 20 ILE A 66 119.08 -34.82 REMARK 500 20 PRO A 82 -179.84 -64.17 REMARK 500 20 LEU A 93 30.91 -92.59 REMARK 500 20 ASN A 95 58.08 -143.91 REMARK 500 20 SER A 97 -4.73 79.51 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1U38 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX WITH C-PEPTIDE, 20 STRUCTURES REMARK 900 RELATED ID: 1U39 RELATED DB: PDB REMARK 900 THE SAME PROTEIN, PDZ2 DOMAIN, 20 STRUCTURES REMARK 900 RELATED ID: 1U3B RELATED DB: PDB REMARK 900 THE SAME PROTEIN, PDZ12C DOMAIN, MINIMIZED AVERAGE STRUCTURE
DBREF 1U37 A 19 105 UNP Q02410 APBA1_HUMAN 655 741
SEQADV 1U37 GLU A 17 UNP Q02410 CLONING ARTIFACT SEQADV 1U37 PHE A 18 UNP Q02410 CLONING ARTIFACT
SEQRES 1 A 89 GLU PHE LYS ASP VAL PHE ILE GLU LYS GLN LYS GLY GLU SEQRES 2 A 89 ILE LEU GLY VAL VAL ILE VAL GLU SER GLY TRP GLY SER SEQRES 3 A 89 ILE LEU PRO THR VAL ILE ILE ALA ASN MET MET HIS GLY SEQRES 4 A 89 GLY PRO ALA GLU LYS SER GLY LYS LEU ASN ILE GLY ASP SEQRES 5 A 89 GLN ILE MET SER ILE ASN GLY THR SER LEU VAL GLY LEU SEQRES 6 A 89 PRO LEU SER THR CYS GLN SER ILE ILE LYS GLY LEU LYS SEQRES 7 A 89 ASN GLN SER ARG VAL LYS LEU ASN ILE VAL ARG
HELIX 1 1 GLY A 56 GLY A 62 1 7 HELIX 2 2 PRO A 82 GLY A 92 1 11
SHEET 1 A 4 PHE A 18 GLU A 24 0 SHEET 2 A 4 ARG A 98 VAL A 104 -1 O LEU A 101 N VAL A 21 SHEET 3 A 4 GLN A 69 ILE A 73 -1 N GLN A 69 O VAL A 104 SHEET 4 A 4 THR A 76 SER A 77 -1 O THR A 76 N ILE A 73 SHEET 1 B 2 VAL A 33 VAL A 36 0 SHEET 2 B 2 ILE A 48 MET A 52 -1 O ASN A 51 N VAL A 34
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000