1TOR - Header Asymmetric Unit

HEADER TRANSMEMBRANE PROTEIN 11-OCT-95 1TOR

TITLE MOLECULAR DYNAMICS SIMULATION FROM 2D-NMR DATA OF THE FREE TITLE 2 ACHR MIR DECAPEPTIDE AND THE ANTIBODY-BOUND [A76]MIR TITLE 3 ANALOGUE

COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYLCHOLINE RECEPTOR, MAIN IMMUNOGENIC REGION; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MIR

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TORPEDO CALIFORNICA; SOURCE 3 ORGANISM_COMMON: PACIFIC ELECTRIC RAY; SOURCE 4 ORGANISM_TAXID: 7787

KEYWDS TRANSMEMBRANE PROTEIN

EXPDTA SOLUTION NMR

NUMMDL 5

AUTHOR P.ORLEWSKI,V.TSIKARIS,C.SAKARELLOS,M.SAKARELLOS-DAISTIOTIS, AUTHOR 2 E.VATZAKI,S.J.TZARTOS,M.MARRAUD,M.T.CUNG

REVDAT 2 24-FEB-09 1TOR 1 VERSN REVDAT 1 08-MAR-96 1TOR 0

JRNL AUTH P.ORLEWSKI,M.MARRAUD,M.T.CUNG,V.TSIKARIS, JRNL AUTH 2 M.SAKARELLOS-DAITSIOTIS,C.SAKARELLOS,E.VATZAKI, JRNL AUTH 3 S.J.TZARTOS JRNL TITL COMPARED STRUCTURES OF THE FREE NICOTINIC JRNL TITL 2 ACETYLCHOLINE RECEPTOR MAIN IMMUNOGENIC REGION JRNL TITL 3 (MIR) DECAPEPTIDE AND THE ANTIBODY-BOUND [A76]MIR JRNL TITL 4 ANALOGUE: A MOLECULAR DYNAMICS SIMULATION FROM JRNL TITL 5 TWO-DIMENSIONAL NMR DATA. JRNL REF BIOPOLYMERS V. 40 419 1996 JRNL REFN ISSN 0006-3525 JRNL PMID 9062066 JRNL DOI 10.1002/(SICI)1097-0282(1996)40:5<419::AID-BIP1>3.0 JRNL DOI 2 .CO;2-Z

REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH V.TSIKARIS,E.DESTICAS,M.SAKARELLOS-DAISTIOTIS, REMARK 1 AUTH 2 C.SAKARELLOS,M.T.CUNG,M.MARRAUD,E.VATZAKI, REMARK 1 AUTH 3 S.J.TZARTOS REMARK 1 TITL CONFORMATIONAL REQUIREMENTS FOR MOLECULAR REMARK 1 TITL 2 RECOGNITION OF ACETYLCHOLINE RECEPTOR MAIN REMARK 1 TITL 3 IMMUNOGENIC REGION (MIR) ANALOGUES BY MONOCLONAL REMARK 1 TITL 4 ANTI-MIR ANTIBODY: A TWO-DIMENSIONAL NUCLEAR REMARK 1 TITL 5 MAGNETIC RESONANCE AND MOLECULAR DYNAMICS APPROACH REMARK 1 REF BIOPOLYMERS V. 33 1123 1993 REMARK 1 REFN ISSN 0006-3525 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.T.CUNG,V.TSIKARIS,P.DEMANGE,I.PAPADOULI, REMARK 1 AUTH 2 S.TZARTOS,C.SAKARELLOS,M.MARRAUD REMARK 1 TITL 2D-NMR AND MOLECULAR DYNAMICS ANALYSIS OF THE REMARK 1 TITL 2 TORPEDO CALIFORNICA ACETYLCHOLINE RECEPTOR REMARK 1 TITL 3 ALPHA67-76 FRAGMENT AND OF ITS [ALA76]-ANALOGUE REMARK 1 REF PEPT.RES. V. 5 14 1992 REMARK 1 REFN ISSN 1040-5704 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.T.CUNG,P.DEMANGE,M.MARRAUD,V.TSIKARIS, REMARK 1 AUTH 2 I.PAPADOULI,C.SAKARELLOS,A.KOKLA,S.J.TZARTOS REMARK 1 TITL TWO-DIMENSIONAL 1H-NMR STUDY OF ANTIGEN-ANTIBODY REMARK 1 TITL 2 INTERACTIONS: BINDING OF SYNTHETIC DECAPEPTIDES TO REMARK 1 TITL 3 AN ANTI-ACETYLCHOLINE RECEPTOR MONOCLONAL ANTIBODY REMARK 1 REF BIOPOLYMERS V. 31 769 1991 REMARK 1 REFN ISSN 0006-3525 REMARK 1 REFERENCE 4 REMARK 1 AUTH M.T.CUNG,M.MARRAUD,I.HADJIDAKIS,E.BAIRAKTARI, REMARK 1 AUTH 2 C.SAKARELLOS,A.KOKLA,S.J TZARTOS REMARK 1 TITL TWO-DIMENSIONAL 1H-NMR STUDY OF SYNTHETIC PEPTIDES REMARK 1 TITL 2 CONTAINING THE MAIN IMMUNOGENIC REGION OF THE REMARK 1 TITL 3 TORPEDO ACETYLCHOLINE RECEPTOR REMARK 1 REF BIOPOLYMERS V. 28 465 1989 REMARK 1 REFN ISSN 0006-3525

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DGII, DISCOVER 2.8 REMARK 3 AUTHORS : HAVEL (DGII), BIOSYM (DISCOVER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 1TOR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 5 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 2 TRP A 1 CD1 - NE1 - CE2 ANGL. DEV. = -5.4 DEGREES REMARK 500 4 TRP A 1 CD1 - NE1 - CE2 ANGL. DEV. = -5.6 DEGREES REMARK 500 5 TRP A 1 CD1 - NE1 - CE2 ANGL. DEV. = -5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 2 159.42 -49.88 REMARK 500 1 ALA A 4 36.67 -98.95 REMARK 500 1 ASP A 5 -92.42 -154.62 REMARK 500 2 ALA A 4 44.63 -95.70 REMARK 500 2 ASP A 5 -73.32 -154.77 REMARK 500 3 ASP A 5 -62.86 -127.14 REMARK 500 3 ILE A 9 -65.91 -93.06 REMARK 500 4 PRO A 3 27.76 -78.54 REMARK 500 4 ASP A 5 -83.04 -150.55 REMARK 500 5 ASP A 5 -78.59 -140.63 REMARK 500 REMARK 500 REMARK: NULL

DBREF 1TOR A 1 10 UNP P02710 ACHA_TORCA 91 100

SEQRES 1 A 10 TRP ASN PRO ALA ASP TYR GLY GLY ILE LYS

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000