10 20 30 40 50 60 70 80 1TK7 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SIGNALING PROTEIN 08-JUN-04 1TK7
TITLE NMR STRUCTURE OF WW DOMAINS (WW3-4) FROM SUPPRESSOR OF TITLE 2 DELTEX
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CG4244-PB; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: SU(DX); SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BCL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX
KEYWDS WW DOMAIN, NOTCH, SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 7
AUTHOR O.Y.FEDOROFF,J.M.AVIS,A.P.GOLOVANOV,M.BARON,S.A.TOWNSON
REVDAT 3 24-FEB-09 1TK7 1 VERSN REVDAT 2 12-OCT-04 1TK7 1 JRNL REVDAT 1 20-JUL-04 1TK7 0
JRNL AUTH O.Y.FEDOROFF,S.A.TOWNSON,A.P.GOLOVANOV,M.BARON, JRNL AUTH 2 J.M.AVIS JRNL TITL THE STRUCTURE AND DYNAMICS OF TANDEM WW DOMAINS IN JRNL TITL 2 A NEGATIVE REGULATOR OF NOTCH SIGNALING, JRNL TITL 3 SUPPRESSOR OF DELTEX JRNL REF J.BIOL.CHEM. V. 279 34991 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15173166 JRNL DOI 10.1074/JBC.M404987200
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.2 REMARK 3 AUTHORS : NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1TK7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-04. REMARK 100 THE RCSB ID CODE IS RCSB022712.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288 REMARK 210 PH : 7.1 REMARK 210 IONIC STRENGTH : 150 NA/KCL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.5 PBS, 50MM ARG/GLU REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 2D REMARK 210 NOESY, E-COSY, 2D TOCSY, HSQC REMARK 210 IN LIQUID CRYSTAL MEDIA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 7 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH FAVORABLE NON REMARK 210 -BOND ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 4 PHE A 29 CE1 PHE A 29 CZ 0.127 REMARK 500 7 PHE A 29 CE1 PHE A 29 CZ 0.191 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 4 40.84 -80.51 REMARK 500 1 ALA A 9 28.65 -79.22 REMARK 500 1 LEU A 13 64.43 60.85 REMARK 500 1 ASP A 15 -40.83 -156.86 REMARK 500 1 ASN A 25 27.12 88.07 REMARK 500 1 ARG A 35 88.30 59.32 REMARK 500 1 GLU A 40 -57.17 71.68 REMARK 500 1 ASP A 41 144.58 -172.27 REMARK 500 1 ARG A 43 47.97 -74.76 REMARK 500 1 GLN A 45 -125.79 47.32 REMARK 500 1 VAL A 49 -43.34 -144.69 REMARK 500 1 GLU A 54 23.84 -146.73 REMARK 500 1 PRO A 56 31.51 -86.46 REMARK 500 1 LEU A 57 -51.94 -151.08 REMARK 500 1 PRO A 58 55.99 -108.59 REMARK 500 1 PRO A 59 46.30 -82.20 REMARK 500 1 ARG A 79 61.47 61.80 REMARK 500 1 GLU A 84 -121.67 -137.46 REMARK 500 1 ASP A 85 -61.90 100.78 REMARK 500 2 MET A 7 -45.56 -156.15 REMARK 500 2 ALA A 9 -66.60 75.07 REMARK 500 2 ASP A 15 26.37 -150.16 REMARK 500 2 SER A 23 -8.77 -58.90 REMARK 500 2 ASN A 25 22.02 85.81 REMARK 500 2 ARG A 35 83.23 62.21 REMARK 500 2 GLU A 40 -56.46 170.54 REMARK 500 2 ASP A 41 126.65 113.48 REMARK 500 2 ARG A 43 157.24 178.77 REMARK 500 2 GLU A 48 -117.04 -103.46 REMARK 500 2 VAL A 49 -94.53 -66.09 REMARK 500 2 ASN A 53 106.51 76.54 REMARK 500 2 LEU A 57 58.34 38.21 REMARK 500 2 PRO A 58 51.87 -108.55 REMARK 500 2 ALA A 67 -36.23 -39.54 REMARK 500 2 ARG A 79 83.57 60.47 REMARK 500 2 PRO A 86 -140.74 -64.26 REMARK 500 2 ARG A 87 79.56 63.86 REMARK 500 3 GLU A 4 39.22 -164.44 REMARK 500 3 PHE A 5 128.00 68.54 REMARK 500 3 HIS A 6 149.62 72.77 REMARK 500 3 ASP A 8 -124.70 52.47 REMARK 500 3 ALA A 9 -45.04 69.76 REMARK 500 3 ASN A 25 30.83 135.81 REMARK 500 3 ARG A 35 68.03 61.57 REMARK 500 3 GLU A 40 -97.59 145.62 REMARK 500 3 ASP A 41 126.41 170.74 REMARK 500 3 PRO A 42 40.21 -88.40 REMARK 500 3 GLN A 45 -131.36 -93.69 REMARK 500 3 GLU A 48 -46.27 -131.60 REMARK 500 3 VAL A 49 -157.06 -153.81 REMARK 500 3 SER A 50 72.61 69.30 REMARK 500 3 GLU A 54 -22.10 -173.84 REMARK 500 3 ALA A 67 -36.67 -39.74 REMARK 500 3 ARG A 79 87.06 56.16 REMARK 500 4 PRO A 3 43.07 -75.76 REMARK 500 4 GLU A 4 44.51 -82.93 REMARK 500 4 PHE A 5 83.50 56.10 REMARK 500 4 MET A 7 132.21 72.87 REMARK 500 4 ASP A 8 -69.51 -103.87 REMARK 500 4 ALA A 9 -39.32 -176.63 REMARK 500 4 PRO A 14 -111.71 -80.80 REMARK 500 4 ASN A 25 28.12 93.41 REMARK 500 4 ARG A 35 91.74 61.73 REMARK 500 4 GLU A 40 -104.79 156.52 REMARK 500 4 ASP A 41 117.79 158.65 REMARK 500 4 ARG A 43 -60.08 68.48 REMARK 500 4 GLN A 47 -48.49 71.85 REMARK 500 4 GLU A 48 -139.39 -72.65 REMARK 500 4 VAL A 49 -17.50 -48.54 REMARK 500 4 GLU A 54 25.07 -71.94 REMARK 500 4 ALA A 67 30.55 -69.29 REMARK 500 4 ARG A 79 94.45 60.91 REMARK 500 4 GLU A 84 33.66 -75.69 REMARK 500 4 ASP A 85 135.31 65.14 REMARK 500 5 SER A 2 127.00 -171.82 REMARK 500 5 GLU A 4 118.42 66.13 REMARK 500 5 HIS A 6 -73.08 -147.48 REMARK 500 5 PRO A 12 -159.70 -76.11 REMARK 500 5 PRO A 14 -129.12 -71.96 REMARK 500 5 ASN A 25 25.78 95.22 REMARK 500 5 ARG A 35 72.34 62.81 REMARK 500 5 GLU A 40 -96.89 114.79 REMARK 500 5 ASP A 41 131.40 171.28 REMARK 500 5 PRO A 42 32.73 -94.17 REMARK 500 5 ARG A 43 146.30 69.48 REMARK 500 5 GLN A 45 -133.95 -79.62 REMARK 500 5 GLU A 48 -120.45 62.98 REMARK 500 5 VAL A 49 -54.94 -26.54 REMARK 500 5 ILE A 52 44.07 -77.79 REMARK 500 5 ARG A 79 98.80 60.60 REMARK 500 5 GLU A 84 44.41 -163.45 REMARK 500 5 PRO A 86 -113.19 -76.97 REMARK 500 6 SER A 2 76.82 51.57 REMARK 500 6 MET A 7 -134.54 33.22 REMARK 500 6 ASP A 8 144.07 -173.51 REMARK 500 6 ASP A 15 -33.40 70.85 REMARK 500 6 ASN A 25 16.25 84.11 REMARK 500 6 ARG A 35 65.10 61.09 REMARK 500 6 GLU A 40 -110.50 86.37 REMARK 500 6 PRO A 42 -175.59 -58.33 REMARK 500 6 ARG A 43 -56.64 79.69 REMARK 500 6 GLU A 48 111.61 70.47 REMARK 500 6 VAL A 49 -114.47 79.26 REMARK 500 6 SER A 50 -81.72 61.23 REMARK 500 6 ASN A 53 54.99 38.03 REMARK 500 6 PRO A 56 22.64 -69.96 REMARK 500 6 LEU A 57 61.90 37.03 REMARK 500 6 ALA A 67 -29.72 -39.06 REMARK 500 6 ARG A 79 63.68 60.05 REMARK 500 6 GLU A 84 -145.48 -102.02 REMARK 500 6 ASP A 85 -65.22 103.43 REMARK 500 7 ALA A 9 -51.31 75.16 REMARK 500 7 LEU A 13 82.87 -175.66 REMARK 500 7 PRO A 14 38.17 -69.38 REMARK 500 7 ASN A 25 36.76 83.76 REMARK 500 7 ARG A 35 107.96 61.22 REMARK 500 7 GLN A 38 145.90 -175.41 REMARK 500 7 GLU A 40 -123.55 109.64 REMARK 500 7 PRO A 42 40.82 -66.27 REMARK 500 7 ARG A 43 -129.47 -178.25 REMARK 500 7 GLU A 48 -112.71 66.93 REMARK 500 7 VAL A 49 -55.51 83.34 REMARK 500 7 GLU A 54 79.28 -65.53 REMARK 500 7 ARG A 79 92.10 61.28 REMARK 500 7 GLU A 84 -137.85 -115.59 REMARK 500 7 ASP A 85 -69.92 106.91 REMARK 500 7 PRO A 86 -102.02 -68.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 4 PHE A 29 0.08 SIDE_CHAIN REMARK 500 7 PHE A 29 0.13 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
DBREF 1TK7 A 8 88 UNP Q9Y0H4 SUDX_DROME 474 554
SEQADV 1TK7 GLY A 1 UNP Q9Y0H4 CLONING ARTIFACT SEQADV 1TK7 SER A 2 UNP Q9Y0H4 CLONING ARTIFACT SEQADV 1TK7 PRO A 3 UNP Q9Y0H4 CLONING ARTIFACT SEQADV 1TK7 GLU A 4 UNP Q9Y0H4 CLONING ARTIFACT SEQADV 1TK7 PHE A 5 UNP Q9Y0H4 CLONING ARTIFACT SEQADV 1TK7 HIS A 6 UNP Q9Y0H4 CLONING ARTIFACT SEQADV 1TK7 MET A 7 UNP Q9Y0H4 CLONING ARTIFACT
SEQRES 1 A 88 GLY SER PRO GLU PHE HIS MET ASP ALA LEU GLY PRO LEU SEQRES 2 A 88 PRO ASP GLY TRP GLU LYS LYS ILE GLN SER ASP ASN ARG SEQRES 3 A 88 VAL TYR PHE VAL ASN HIS LYS ASN ARG THR THR GLN TRP SEQRES 4 A 88 GLU ASP PRO ARG THR GLN GLY GLN GLU VAL SER LEU ILE SEQRES 5 A 88 ASN GLU GLY PRO LEU PRO PRO GLY TRP GLU ILE ARG TYR SEQRES 6 A 88 THR ALA ALA GLY GLU ARG PHE PHE VAL ASP HIS ASN THR SEQRES 7 A 88 ARG ARG THR THR PHE GLU ASP PRO ARG PRO
HELIX 1 1 VAL A 49 GLU A 54 1 6
SHEET 1 A 3 LYS A 19 GLN A 22 0 SHEET 2 A 3 ARG A 26 ASN A 31 -1 O TYR A 28 N LYS A 20 SHEET 3 A 3 THR A 36 GLU A 40 -1 O THR A 36 N ASN A 31 SHEET 1 B 3 GLU A 62 THR A 66 0 SHEET 2 B 3 GLU A 70 ASP A 75 -1 O PHE A 72 N ARG A 64 SHEET 3 B 3 ARG A 80 THR A 82 -1 O THR A 82 N PHE A 73
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000