10 20 30 40 50 60 70 80 1TI7 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 02-JUN-04 1TI7
TITLE CRYSTAL STRUCTURE OF NMRA, A NEGATIVE TRANSCRIPTIONAL REGULATOR, IN TITLE 2 COMPLEX WITH NADP AT 1.7A RESOLUTION
COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITROGEN METABOLITE REPRESSION REGULATOR NMRA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EMERICELLA NIDULANS; SOURCE 3 ORGANISM_TAXID: 162425; SOURCE 4 GENE: NMRA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL23 DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PTRC99A
KEYWDS ROSSMANN FOLD, TRANSCRIPTIONAL REGULATION, SHORT CHAIN, KEYWDS 2 DEHYDROGENASE, REDUCTASE, NADP BINDING, NMRA, TRANSCRIPTION
EXPDTA X-RAY DIFFRACTION
AUTHOR H.K.LAMB,K.LESLIE,A.L.DODDS,M.NUTLEY,A.COOPER,C.JOHNSON,P.THOMPSON, AUTHOR 2 D.K.STAMMERS,A.R.HAWKINS
REVDAT 3 13-JUL-11 1TI7 1 VERSN REVDAT 2 24-FEB-09 1TI7 1 VERSN REVDAT 1 08-JUN-04 1TI7 0
SPRSDE 08-JUN-04 1TI7 1PDS
JRNL AUTH H.K.LAMB,K.LESLIE,A.L.DODDS,M.NUTLEY,A.COOPER,C.JOHNSON, JRNL AUTH 2 P.THOMPSON,D.K.STAMMERS,A.R.HAWKINS JRNL TITL THE NEGATIVE TRANSCRIPTIONAL REGULATOR NMRA DISCRIMINATES JRNL TITL 2 BETWEEN OXIDIZED AND REDUCED DINUCLEOTIDES. JRNL REF J.BIOL.CHEM. V. 278 32107 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12764138 JRNL DOI 10.1074/JBC.M304104200
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.K.STAMMERS,J.REN,K.LESLIE,C.E.NICHOLS,H.K.LAMB, REMARK 1 AUTH 2 S.D.COCKLIN,A.DODDS,A.R.HAWKINS REMARK 1 TITL THE STRUCTURE OF THE NEGATIVE TRANSCRIPTIONAL REGULATOR NMRA REMARK 1 TITL 2 REVEALS A STRUCTURAL SUPERFAMILY WHICH INCLUDES THE REMARK 1 TITL 3 SHORT-CHAIN DEHYDROGENASE/REDUCTASES REMARK 1 REF EMBO J. V. 20 6619 2001 REMARK 1 REFN ISSN 0261-4189 REMARK 1 PMID 11726498 REMARK 1 DOI 10.1093/EMBOJ/20.23.6619 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.E.NICHOLS,S.D.COCKLIN,A.DODDS,J.REN,H.LAMB,A.R.HAWKINS, REMARK 1 AUTH 2 D.K.STAMMERS REMARK 1 TITL EXPRESSION, PURIFICATION AND CRYSTALLIZATION OF ASPERGILLUS REMARK 1 TITL 2 NIDULANS NMRA, A NEGATIVE REGULATORY PROTEIN INVOLVED IN REMARK 1 TITL 3 NITROGEN-METABOLITE REPRESSION REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 57 1722 2001 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 11679757 REMARK 1 DOI 10.1107/S090744490101410X
REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1791326.930 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 39223 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1959 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3651 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 201 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.023 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2569 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 433 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.07000 REMARK 3 B22 (A**2) : -1.07000 REMARK 3 B33 (A**2) : 2.14000 REMARK 3 B12 (A**2) : -0.34000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.17 REMARK 3 ESD FROM SIGMAA (A) : 0.20 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.22 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.50 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.99 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.960 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.740 ; 8.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.860 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.630 ; 16.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.41 REMARK 3 BSOL : 70.56 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER_REP.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1TI7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-04. REMARK 100 THE RCSB ID CODE IS RCSB022659.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-01 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99187 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39223 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 27.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 9.220 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.3900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.25 REMARK 200 R MERGE FOR SHELL (I) : 0.58200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.430 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS 1.1 REMARK 200 STARTING MODEL: PDB ENTRY 1K6I REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: KCL, K/NA DIHYDROGEN PHOSPHATE, TRIS, REMARK 280 PH 6.50, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.44000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.72000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 34.72000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 69.44000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 283 REMARK 465 ARG A 284 REMARK 465 PRO A 285 REMARK 465 ALA A 286 REMARK 465 ALA A 287 REMARK 465 GLY A 288 REMARK 465 SER A 289 REMARK 465 PRO A 290 REMARK 465 LYS A 291 REMARK 465 GLY A 292 REMARK 465 LEU A 293 REMARK 465 GLY A 294 REMARK 465 PRO A 295 REMARK 465 ALA A 296 REMARK 465 ASN A 297 REMARK 465 GLY A 298 REMARK 465 LYS A 299 REMARK 465 GLY A 300 REMARK 465 ALA A 301 REMARK 465 GLY A 302 REMARK 465 ALA A 303 REMARK 465 GLY A 304 REMARK 465 MET A 305 REMARK 465 MET A 306 REMARK 465 GLN A 307 REMARK 465 GLY A 308
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG A 329 NH1 ARG A 329 5675 2.09 REMARK 500 O HOH A 1365 O HOH A 1365 6765 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 87 87.33 -40.95 REMARK 500 PRO A 161 48.17 -74.82 REMARK 500 LEU A 164 -42.79 69.00 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1314 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH A1356 DISTANCE = 5.43 ANGSTROMS REMARK 525 HOH A1365 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A1384 DISTANCE = 5.03 ANGSTROMS REMARK 525 HOH A1401 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH A1426 DISTANCE = 7.75 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 379 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1483 O REMARK 620 2 ILE A 50 O 139.1 REMARK 620 3 VAL A 53 O 73.8 80.4 REMARK 620 4 HOH A1481 O 124.2 93.2 150.8 REMARK 620 5 GLN A 48 O 81.6 94.2 133.3 75.2 REMARK 620 6 HOH A1150 O 109.8 99.1 85.4 67.4 140.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 380 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 143 O REMARK 620 2 HOH A1120 O 60.4 REMARK 620 3 ARG A 139 O 144.3 92.3 REMARK 620 4 LEU A 141 O 75.4 74.1 75.1 REMARK 620 5 HOH A1035 O 94.7 41.0 52.5 59.0 REMARK 620 6 SER A 145 OG 98.8 118.0 115.1 162.3 138.6 REMARK 620 7 VAL A 138 O 124.4 151.2 68.8 80.0 113.6 90.2 REMARK 620 8 HOH A1121 O 118.1 84.1 77.5 143.9 85.6 53.6 111.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 381 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 148 O REMARK 620 2 SER A 112 O 65.9 REMARK 620 3 MET A 113 SD 115.6 61.0 REMARK 620 4 ALA A 150 N 79.1 99.1 76.1 REMARK 620 5 HOH A1193 O 138.4 114.7 96.8 136.7 REMARK 620 6 SER A 111 OG 74.4 118.4 165.2 117.7 69.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 382 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1155 O REMARK 620 2 GLY A 120 O 82.0 REMARK 620 3 HOH A1082 O 160.9 79.6 REMARK 620 4 HOH A1413 O 90.2 93.9 86.0 REMARK 620 5 SER A 117 O 90.6 91.2 94.8 174.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 383 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1109 O REMARK 620 2 HOH A1118 O 144.2 REMARK 620 3 GLN A 140 O 100.3 94.3 REMARK 620 4 ASP A 349 OD1 58.0 93.0 146.9 REMARK 620 5 HOH A1395 O 87.0 100.4 143.4 65.9 REMARK 620 6 GLY A 347 O 75.4 73.8 84.2 67.0 132.1 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 379 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 380 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 381 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 382 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 383 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 384 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 385 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 386 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 387 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 388 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 389 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 390 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 391 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 392
DBREF 1TI7 A 1 352 UNP O59919 O59919_EMENI 1 352
SEQADV 1TI7 ARG A 238 UNP O59919 LEU 238 SEE REMARK 999
SEQRES 1 A 352 MET ALA GLN GLN LYS LYS THR ILE ALA VAL VAL ASN ALA SEQRES 2 A 352 THR GLY ARG GLN ALA ALA SER LEU ILE ARG VAL ALA ALA SEQRES 3 A 352 ALA VAL GLY HIS HIS VAL ARG ALA GLN VAL HIS SER LEU SEQRES 4 A 352 LYS GLY LEU ILE ALA GLU GLU LEU GLN ALA ILE PRO ASN SEQRES 5 A 352 VAL THR LEU PHE GLN GLY PRO LEU LEU ASN ASN VAL PRO SEQRES 6 A 352 LEU MET ASP THR LEU PHE GLU GLY ALA HIS LEU ALA PHE SEQRES 7 A 352 ILE ASN THR THR SER GLN ALA GLY ASP GLU ILE ALA ILE SEQRES 8 A 352 GLY LYS ASP LEU ALA ASP ALA ALA LYS ARG ALA GLY THR SEQRES 9 A 352 ILE GLN HIS TYR ILE TYR SER SER MET PRO ASP HIS SER SEQRES 10 A 352 LEU TYR GLY PRO TRP PRO ALA VAL PRO MET TRP ALA PRO SEQRES 11 A 352 LYS PHE THR VAL GLU ASN TYR VAL ARG GLN LEU GLY LEU SEQRES 12 A 352 PRO SER THR PHE VAL TYR ALA GLY ILE TYR ASN ASN ASN SEQRES 13 A 352 PHE THR SER LEU PRO TYR PRO LEU PHE GLN MET GLU LEU SEQRES 14 A 352 MET PRO ASP GLY THR PHE GLU TRP HIS ALA PRO PHE ASP SEQRES 15 A 352 PRO ASP ILE PRO LEU PRO TRP LEU ASP ALA GLU HIS ASP SEQRES 16 A 352 VAL GLY PRO ALA LEU LEU GLN ILE PHE LYS ASP GLY PRO SEQRES 17 A 352 GLN LYS TRP ASN GLY HIS ARG ILE ALA LEU THR PHE GLU SEQRES 18 A 352 THR LEU SER PRO VAL GLN VAL CYS ALA ALA PHE SER ARG SEQRES 19 A 352 ALA LEU ASN ARG ARG VAL THR TYR VAL GLN VAL PRO LYS SEQRES 20 A 352 VAL GLU ILE LYS VAL ASN ILE PRO VAL GLY TYR ARG GLU SEQRES 21 A 352 GLN LEU GLU ALA ILE GLU VAL VAL PHE GLY GLU HIS LYS SEQRES 22 A 352 ALA PRO TYR PHE PRO LEU PRO GLU PHE SER ARG PRO ALA SEQRES 23 A 352 ALA GLY SER PRO LYS GLY LEU GLY PRO ALA ASN GLY LYS SEQRES 24 A 352 GLY ALA GLY ALA GLY MET MET GLN GLY PRO GLY GLY VAL SEQRES 25 A 352 ILE SER GLN ARG VAL THR ASP GLU ALA ARG LYS LEU TRP SEQRES 26 A 352 SER GLY TRP ARG ASP MET GLU GLU TYR ALA ARG GLU VAL SEQRES 27 A 352 PHE PRO ILE GLU GLU GLU ALA ASN GLY LEU ASP TRP MET SEQRES 28 A 352 LEU
HET K A 379 1 HET K A 380 1 HET K A 381 1 HET K A 382 1 HET K A 383 1 HET CL A 384 1 HET CL A 385 1 HET CL A 386 1 HET CL A 387 1 HET CL A 388 1 HET CL A 389 1 HET CL A 390 1 HET CL A 391 1 HET NAP A 400 48 HET GOL A 392 6
HETNAM K POTASSIUM ION HETNAM CL CHLORIDE ION HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM GOL GLYCEROL
HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 2 K 5(K 1+) FORMUL 7 CL 8(CL 1-) FORMUL 15 NAP C21 H28 N7 O17 P3 FORMUL 16 GOL C3 H8 O3 FORMUL 17 HOH *433(H2 O)
HELIX 1 1 GLY A 15 VAL A 28 1 14 HELIX 2 2 GLY A 41 ALA A 49 1 9 HELIX 3 3 ASN A 63 GLU A 72 1 10 HELIX 4 4 THR A 82 GLY A 86 5 5 HELIX 5 5 ASP A 87 GLY A 103 1 17 HELIX 6 6 ASP A 115 TYR A 119 5 5 HELIX 7 7 TRP A 128 GLN A 140 1 13 HELIX 8 8 ASN A 155 PHE A 157 5 3 HELIX 9 9 ASP A 191 GLY A 207 1 17 HELIX 10 10 GLY A 207 ASN A 212 1 6 HELIX 11 11 SER A 224 ASN A 237 1 14 HELIX 12 12 PRO A 255 PHE A 269 1 15 HELIX 13 13 THR A 318 TRP A 325 1 8 HELIX 14 14 ASP A 330 VAL A 338 1 9 HELIX 15 15 VAL A 338 ASN A 346 1 9
SHEET 1 A 7 VAL A 53 GLN A 57 0 SHEET 2 A 7 VAL A 32 VAL A 36 1 N ALA A 34 O THR A 54 SHEET 3 A 7 ILE A 8 VAL A 10 1 N ILE A 8 O ARG A 33 SHEET 4 A 7 LEU A 76 ILE A 79 1 O LEU A 76 N ALA A 9 SHEET 5 A 7 HIS A 107 SER A 112 1 O ILE A 109 N ILE A 79 SHEET 6 A 7 SER A 145 ALA A 150 1 O THR A 146 N TYR A 110 SHEET 7 A 7 ARG A 215 LEU A 218 1 O ILE A 216 N PHE A 147 SHEET 1 B 3 ILE A 152 TYR A 153 0 SHEET 2 B 3 LEU A 187 LEU A 190 1 O PRO A 188 N ILE A 152 SHEET 3 B 3 GLU A 221 LEU A 223 -1 O GLU A 221 N TRP A 189 SHEET 1 C 3 MET A 167 LEU A 169 0 SHEET 2 C 3 PHE A 175 ALA A 179 -1 O GLU A 176 N GLU A 168 SHEET 3 C 3 VAL A 240 GLN A 244 1 O VAL A 243 N TRP A 177
LINK K K A 379 O HOH A1483 1555 1555 3.62 LINK K K A 379 O ILE A 50 1555 1555 2.77 LINK K K A 379 O VAL A 53 1555 1555 2.56 LINK K K A 379 O HOH A1481 1555 1555 2.87 LINK K K A 379 O GLN A 48 1555 1555 2.65 LINK K K A 380 O LEU A 143 1555 1555 2.59 LINK K K A 380 O HOH A1120 1555 1555 3.65 LINK K K A 380 O ARG A 139 1555 1555 3.37 LINK K K A 380 O LEU A 141 1555 1555 3.04 LINK K K A 380 O HOH A1035 1555 1555 2.25 LINK K K A 380 OG SER A 145 1555 1555 2.74 LINK K K A 380 O VAL A 138 1555 1555 2.99 LINK K K A 380 O HOH A1121 1555 1555 3.30 LINK K K A 381 O VAL A 148 1555 1555 3.36 LINK K K A 381 O SER A 112 1555 1555 2.68 LINK K K A 381 SD MET A 113 1555 1555 3.57 LINK K K A 381 N ALA A 150 1555 1555 2.95 LINK K K A 381 O HOH A1193 1555 1555 2.89 LINK K K A 381 OG SER A 111 1555 1555 2.80 LINK K K A 382 O HOH A1155 1555 1555 2.78 LINK K K A 382 O GLY A 120 1555 1555 2.72 LINK K K A 382 O HOH A1082 1555 1555 3.33 LINK K K A 382 O HOH A1413 1555 1555 2.85 LINK K K A 382 O SER A 117 1555 1555 2.70 LINK K K A 383 O HOH A1109 1555 1555 3.05 LINK K K A 383 O HOH A1118 1555 1555 3.07 LINK K K A 383 O GLN A 140 1555 1555 2.72 LINK K K A 379 O HOH A1150 1555 2664 2.79 LINK K K A 383 OD1 ASP A 349 1555 6655 3.51 LINK K K A 383 O HOH A1395 1555 6655 3.49 LINK K K A 383 O GLY A 347 1555 6655 2.69
SITE 1 AC1 5 GLN A 48 ILE A 50 VAL A 53 HOH A1150 SITE 2 AC1 5 HOH A1481 SITE 1 AC2 6 VAL A 138 ARG A 139 LEU A 141 LEU A 143 SITE 2 AC2 6 SER A 145 HOH A1035 SITE 1 AC3 6 SER A 111 SER A 112 MET A 113 VAL A 148 SITE 2 AC3 6 ALA A 150 HOH A1193 SITE 1 AC4 4 SER A 117 GLY A 120 HOH A1155 HOH A1413 SITE 1 AC5 5 GLN A 140 GLY A 347 ASP A 349 HOH A1109 SITE 2 AC5 5 HOH A1118 SITE 1 AC6 5 GLN A 106 PRO A 208 VAL A 252 ASN A 253 SITE 2 AC6 5 HOH A1069 SITE 1 AC7 5 LYS A 6 HIS A 30 ASN A 253 HOH A1051 SITE 2 AC7 5 HOH A1333 SITE 1 AC8 3 GLN A 166 GLU A 168 LYS A 251 SITE 1 AC9 3 TYR A 276 PHE A 277 HOH A1253 SITE 1 BC1 4 THR A 241 TYR A 242 HOH A1229 HOH A1334 SITE 1 BC2 5 ASN A 12 THR A 14 VAL A 36 HIS A 37 SITE 2 BC2 5 HOH A1166 SITE 1 BC3 2 ARG A 33 HOH A1443 SITE 1 BC4 5 LEU A 169 ASP A 349 TRP A 350 HOH A1226 SITE 2 BC4 5 HOH A1301 SITE 1 BC5 27 ASN A 12 THR A 14 GLY A 15 ARG A 16 SITE 2 BC5 27 GLN A 17 HIS A 37 ASN A 80 THR A 81 SITE 3 BC5 27 THR A 82 GLN A 84 ALA A 85 MET A 113 SITE 4 BC5 27 LYS A 131 ALA A 150 GLY A 151 ILE A 152 SITE 5 BC5 27 TYR A 153 ASN A 156 TYR A 276 HOH A1141 SITE 6 BC5 27 HOH A1167 HOH A1169 HOH A1171 HOH A1189 SITE 7 BC5 27 HOH A1190 HOH A1199 HOH A1465 SITE 1 BC6 9 PRO A 198 LEU A 201 GLN A 202 LYS A 205 SITE 2 BC6 9 LEU A 324 TRP A 325 GLU A 344 HOH A1130 SITE 3 BC6 9 HOH A1287
CRYST1 76.390 76.390 104.160 90.00 90.00 120.00 P 32 2 1 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.013091 0.007558 0.000000 0.00000
SCALE2 0.000000 0.015116 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009601 0.00000