10 20 30 40 50 60 70 80 1T8J - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER DE NOVO PROTEIN 13-MAY-04 1T8J
TITLE NMR STRUCTURE OF BBA5, A COMPACT, INDEPENDENTLY FOLDED BBA TITLE 2 MOTIF
COMPND MOL_ID: 1; COMPND 2 MOLECULE: BBA5; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE PROTEIN WAS CHEMICALLY SYNTHESIZED.
KEYWDS PROTEIN DESIGN, MINI-PROTEIN, BETA BETA ALPHA, DE NOVO KEYWDS 2 PROTEIN
EXPDTA SOLUTION NMR
AUTHOR M.D.STRUTHERS,J.J.OTTESEN,B.IMPERIALI
REVDAT 2 24-FEB-09 1T8J 1 VERSN REVDAT 1 25-MAY-04 1T8J 0
JRNL AUTH M.D.STRUTHERS,J.J.OTTESEN,B.IMPERIALI JRNL TITL DESIGN AND NMR ANALYSES OF COMPACT, INDEPENDENTLY JRNL TITL 2 FOLDED BBA MOTIFS JRNL REF FOLD.DES. V. 3 95 1998 JRNL REFN ISSN 1359-0278 JRNL PMID 9565754 JRNL DOI 10.1016/S1359-0278(98)00015-7
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRCHITECT REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1T8J COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAY-04. REMARK 100 THE RCSB ID CODE IS RCSB022445.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 7.8 MM BBA5, 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D TOCSY, DQF-COSY, 2D NOESY, REMARK 210 ROESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NMRCHITECT REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 2 NE - CZ - NH1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 2 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 10 NE - CZ - NH1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 10 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 19 NE - CZ - NH1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 19 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 HIS A 21 ND1 - CE1 - NE2 ANGL. DEV. = 8.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 2 126.87 -21.01 REMARK 500 TYR A 6 138.34 -174.90 REMARK 500 ARG A 10 -68.43 -146.75 REMARK 500 SER A 11 14.24 46.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 PHE A 8 0.11 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH2 A 24
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HCW RELATED DB: PDB REMARK 900 BBA1 (MONOMER) REMARK 900 RELATED ID: 1SN9 RELATED DB: PDB REMARK 900 BBAT (TETRAMER) REMARK 900 RELATED ID: 1SNA RELATED DB: PDB REMARK 900 BBAT (TETRAMER, SELENOMETHIONINE MUTANT) REMARK 900 RELATED ID: 1SNE RELATED DB: PDB REMARK 900 BBAT (TETRAMER, SELENOMETHIONINE MUTANT)
DBREF 1T8J A 0 24 PDB 1T8J 1T8J 0 24
SEQRES 1 A 25 ACE TYR ARG VAL DPR SER TYR ASP PHE SER ARG SER ASP SEQRES 2 A 25 GLU LEU ALA LYS LEU LEU ARG GLN HIS ALA GLY NH2
HET ACE A 0 6 HET DPR A 4 14 HET NH2 A 24 3
HETNAM ACE ACETYL GROUP HETNAM DPR D-PROLINE HETNAM NH2 AMINO GROUP
FORMUL 1 ACE C2 H4 O FORMUL 1 DPR C5 H9 N O2 FORMUL 1 NH2 H2 N
HELIX 1 1 ASP A 12 HIS A 21 1 10
LINK C ACE A 0 N TYR A 1 1555 1555 1.35 LINK C GLY A 23 N NH2 A 24 1555 1555 1.32 LINK C VAL A 3 N DPR A 4 1555 1555 1.38 LINK C DPR A 4 N SER A 5 1555 1555 1.35
SITE 1 AC2 1 GLY A 23
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000