10 20 30 40 50 60 70 80 1T23 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER DNA BINDING PROTEIN 20-APR-04 1T23
TITLE NMR SOLUTION STRUCTURE OF THE ARCHAEBACTERIAL CHROMOSOMAL TITLE 2 PROTEIN MC1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHROMOSOMAL PROTEIN MC1; COMPND 3 CHAIN: A
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA THERMOPHILA; SOURCE 3 ORGANISM_TAXID: 2210; SOURCE 4 STRAIN: CHTI55
KEYWDS ALPHA/BETA BARREL, DNA BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 8
AUTHOR F.PAQUET,F.CULARD,F.BARBAULT,J.C.MAURIZOT,G.LANCELOT
REVDAT 2 24-FEB-09 1T23 1 VERSN REVDAT 1 07-DEC-04 1T23 0
SPRSDE 07-DEC-04 1T23 1KOM
JRNL AUTH F.PAQUET,F.CULARD,F.BARBAULT,J.C.MAURIZOT, JRNL AUTH 2 G.LANCELOT JRNL TITL NMR SOLUTION STRUCTURE OF THE ARCHAEBACTERIAL JRNL TITL 2 CHROMOSOMAL PROTEIN MC1 REVEALS A NEW PROTEIN FOLD JRNL REF BIOCHEMISTRY V. 43 14971 2004 JRNL REFN ISSN 0006-2960 JRNL PMID 15554704 JRNL DOI 10.1021/BI048382Z
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1T23 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-APR-04. REMARK 100 THE RCSB ID CODE IS RCSB022214.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 5.3 REMARK 210 IONIC STRENGTH : 800MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.74 MM MC1, 70 MM SODIUM REMARK 210 ACETATE BUFFER, 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA, AMX REMARK 210 SPECTROMETER MANUFACTURER : VARIAN, BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1B, UXNMR, DYANA 1.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS AND REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 8 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING 2D HOMONUCLEAR REMARK 210 SPECTRA
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 10 -155.14 -75.07 REMARK 500 1 ASP A 12 8.80 58.07 REMARK 500 1 ASN A 14 -78.06 -118.40 REMARK 500 1 GLU A 15 133.82 -179.23 REMARK 500 1 PHE A 19 -173.32 -176.24 REMARK 500 1 ARG A 34 -70.84 -99.70 REMARK 500 1 LYS A 39 -56.60 76.59 REMARK 500 1 ASN A 41 68.49 -158.43 REMARK 500 1 ALA A 67 100.41 -58.39 REMARK 500 1 MET A 75 123.55 -176.21 REMARK 500 1 ILE A 79 170.54 177.87 REMARK 500 1 LYS A 81 -155.54 -165.02 REMARK 500 2 ASP A 10 -153.19 -73.49 REMARK 500 2 GLU A 11 50.95 71.90 REMARK 500 2 ASP A 12 6.60 59.14 REMARK 500 2 ASN A 14 -81.67 -117.49 REMARK 500 2 GLU A 15 129.84 -170.12 REMARK 500 2 PHE A 19 -172.11 -175.42 REMARK 500 2 ARG A 34 -72.31 -97.04 REMARK 500 2 LYS A 39 -59.16 72.84 REMARK 500 2 ASN A 41 67.77 -159.05 REMARK 500 2 TRP A 61 -166.13 -128.49 REMARK 500 2 LYS A 69 62.02 -69.44 REMARK 500 2 LYS A 81 -152.58 -169.81 REMARK 500 2 LYS A 91 95.23 -163.69 REMARK 500 3 ASP A 10 -156.16 -73.48 REMARK 500 3 GLU A 11 51.66 70.92 REMARK 500 3 ASP A 12 7.95 59.45 REMARK 500 3 ASN A 14 -77.24 -117.11 REMARK 500 3 GLU A 15 138.08 -178.05 REMARK 500 3 PHE A 19 -173.49 -175.17 REMARK 500 3 ARG A 34 -73.44 -94.98 REMARK 500 3 LYS A 39 -56.57 72.01 REMARK 500 3 ASN A 41 67.73 -156.75 REMARK 500 3 ASP A 43 -168.71 -165.11 REMARK 500 3 LEU A 47 93.32 -69.71 REMARK 500 3 ARG A 48 -165.41 -113.12 REMARK 500 3 ALA A 67 98.60 -66.18 REMARK 500 3 LYS A 69 54.03 38.99 REMARK 500 3 MET A 75 132.20 -170.42 REMARK 500 3 LYS A 81 -162.41 -164.16 REMARK 500 4 ASP A 10 -144.09 -98.61 REMARK 500 4 GLU A 11 57.54 72.63 REMARK 500 4 ASP A 12 -5.15 74.14 REMARK 500 4 ASN A 14 -74.49 -129.19 REMARK 500 4 PHE A 19 -170.65 -174.81 REMARK 500 4 ARG A 34 -75.16 -92.47 REMARK 500 4 LYS A 39 -55.87 67.67 REMARK 500 4 TRP A 61 -165.07 -128.11 REMARK 500 4 VAL A 65 -167.94 -102.00 REMARK 500 4 ASN A 70 -75.57 2.07 REMARK 500 4 ARG A 71 44.22 34.63 REMARK 500 4 MET A 75 146.02 -179.58 REMARK 500 4 ILE A 79 170.08 178.59 REMARK 500 4 LYS A 81 -156.88 -169.09 REMARK 500 5 ASP A 10 -158.18 -74.55 REMARK 500 5 GLU A 11 48.94 70.90 REMARK 500 5 ASP A 12 8.37 58.63 REMARK 500 5 ASN A 14 -78.72 -119.25 REMARK 500 5 GLU A 15 140.55 -177.01 REMARK 500 5 PHE A 19 -173.43 -174.23 REMARK 500 5 ARG A 34 -74.76 -94.65 REMARK 500 5 LYS A 39 -56.80 73.27 REMARK 500 5 ASN A 41 68.08 -160.23 REMARK 500 5 LEU A 47 93.16 -66.52 REMARK 500 5 ARG A 48 -169.01 -117.29 REMARK 500 5 GLU A 49 118.92 -160.23 REMARK 500 5 LYS A 53 90.92 -64.58 REMARK 500 5 TRP A 61 -167.21 -126.49 REMARK 500 5 ALA A 67 99.30 -64.30 REMARK 500 5 MET A 75 110.38 -164.75 REMARK 500 5 LYS A 81 -152.18 -173.17 REMARK 500 5 LEU A 92 -175.78 -177.31 REMARK 500 6 ASP A 10 -159.40 -69.63 REMARK 500 6 GLU A 11 52.56 72.23 REMARK 500 6 ASN A 14 -76.77 -125.22 REMARK 500 6 PHE A 19 -172.26 -172.54 REMARK 500 6 ARG A 34 -72.83 -95.51 REMARK 500 6 LYS A 39 -56.27 75.21 REMARK 500 6 ASN A 41 67.31 -160.44 REMARK 500 6 ASP A 43 -169.49 -168.04 REMARK 500 6 LEU A 47 95.77 -63.21 REMARK 500 6 LYS A 69 64.87 -69.83 REMARK 500 6 LYS A 81 -154.92 -167.81 REMARK 500 7 ASP A 10 -150.93 -82.46 REMARK 500 7 GLU A 11 53.63 73.56 REMARK 500 7 ASN A 14 -77.03 -126.74 REMARK 500 7 PHE A 19 -173.30 -175.25 REMARK 500 7 ARG A 34 -74.57 -92.97 REMARK 500 7 LYS A 39 -59.64 71.36 REMARK 500 7 ASP A 43 -168.23 -167.13 REMARK 500 7 VAL A 65 -168.54 -103.65 REMARK 500 7 MET A 75 132.11 -175.06 REMARK 500 7 ILE A 79 165.89 179.02 REMARK 500 7 LYS A 81 -152.86 -171.54 REMARK 500 7 LEU A 92 -176.93 -170.47 REMARK 500 8 ASP A 10 -146.53 -80.71 REMARK 500 8 GLU A 11 55.44 71.00 REMARK 500 8 ASN A 14 -80.30 -126.25 REMARK 500 8 PHE A 19 -169.29 -175.74 REMARK 500 8 ARG A 34 -74.59 -95.11 REMARK 500 8 LYS A 39 -52.04 67.64 REMARK 500 8 ASP A 43 -167.47 -167.82 REMARK 500 8 TRP A 61 -163.07 -124.91 REMARK 500 8 PRO A 68 -153.84 -88.52 REMARK 500 8 LYS A 69 61.70 -68.04 REMARK 500 8 MET A 75 106.76 -167.98 REMARK 500 8 LYS A 81 -154.49 -164.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 4 0.29 SIDE_CHAIN REMARK 500 1 ARG A 9 0.31 SIDE_CHAIN REMARK 500 1 ARG A 25 0.26 SIDE_CHAIN REMARK 500 1 ARG A 34 0.31 SIDE_CHAIN REMARK 500 1 ARG A 46 0.31 SIDE_CHAIN REMARK 500 1 ARG A 48 0.28 SIDE_CHAIN REMARK 500 1 ARG A 50 0.30 SIDE_CHAIN REMARK 500 1 ARG A 71 0.26 SIDE_CHAIN REMARK 500 1 ARG A 88 0.31 SIDE_CHAIN REMARK 500 2 ARG A 4 0.32 SIDE_CHAIN REMARK 500 2 ARG A 9 0.32 SIDE_CHAIN REMARK 500 2 ARG A 25 0.18 SIDE_CHAIN REMARK 500 2 ARG A 34 0.32 SIDE_CHAIN REMARK 500 2 ARG A 46 0.31 SIDE_CHAIN REMARK 500 2 ARG A 48 0.32 SIDE_CHAIN REMARK 500 2 ARG A 50 0.32 SIDE_CHAIN REMARK 500 2 ARG A 71 0.31 SIDE_CHAIN REMARK 500 2 ARG A 88 0.32 SIDE_CHAIN REMARK 500 3 ARG A 4 0.29 SIDE_CHAIN REMARK 500 3 ARG A 9 0.30 SIDE_CHAIN REMARK 500 3 ARG A 25 0.20 SIDE_CHAIN REMARK 500 3 ARG A 34 0.32 SIDE_CHAIN REMARK 500 3 ARG A 46 0.29 SIDE_CHAIN REMARK 500 3 ARG A 48 0.32 SIDE_CHAIN REMARK 500 3 ARG A 50 0.26 SIDE_CHAIN REMARK 500 3 ARG A 71 0.32 SIDE_CHAIN REMARK 500 3 ARG A 88 0.30 SIDE_CHAIN REMARK 500 4 ARG A 4 0.32 SIDE_CHAIN REMARK 500 4 ARG A 9 0.29 SIDE_CHAIN REMARK 500 4 ARG A 25 0.30 SIDE_CHAIN REMARK 500 4 ARG A 34 0.30 SIDE_CHAIN REMARK 500 4 ARG A 46 0.30 SIDE_CHAIN REMARK 500 4 ARG A 48 0.32 SIDE_CHAIN REMARK 500 4 ARG A 50 0.30 SIDE_CHAIN REMARK 500 4 ARG A 71 0.28 SIDE_CHAIN REMARK 500 4 ARG A 88 0.11 SIDE_CHAIN REMARK 500 5 ARG A 4 0.23 SIDE_CHAIN REMARK 500 5 ARG A 9 0.32 SIDE_CHAIN REMARK 500 5 ARG A 25 0.28 SIDE_CHAIN REMARK 500 5 ARG A 34 0.31 SIDE_CHAIN REMARK 500 5 ARG A 46 0.25 SIDE_CHAIN REMARK 500 5 ARG A 48 0.20 SIDE_CHAIN REMARK 500 5 ARG A 50 0.30 SIDE_CHAIN REMARK 500 5 ARG A 71 0.28 SIDE_CHAIN REMARK 500 5 ARG A 88 0.31 SIDE_CHAIN REMARK 500 6 ARG A 4 0.29 SIDE_CHAIN REMARK 500 6 ARG A 9 0.30 SIDE_CHAIN REMARK 500 6 ARG A 25 0.30 SIDE_CHAIN REMARK 500 6 ARG A 34 0.32 SIDE_CHAIN REMARK 500 6 ARG A 46 0.29 SIDE_CHAIN REMARK 500 6 ARG A 48 0.32 SIDE_CHAIN REMARK 500 6 ARG A 50 0.32 SIDE_CHAIN REMARK 500 6 ARG A 71 0.29 SIDE_CHAIN REMARK 500 6 ARG A 88 0.31 SIDE_CHAIN REMARK 500 7 ARG A 4 0.30 SIDE_CHAIN REMARK 500 7 ARG A 9 0.28 SIDE_CHAIN REMARK 500 7 ARG A 25 0.32 SIDE_CHAIN REMARK 500 7 ARG A 34 0.31 SIDE_CHAIN REMARK 500 7 ARG A 46 0.29 SIDE_CHAIN REMARK 500 7 ARG A 48 0.31 SIDE_CHAIN REMARK 500 7 ARG A 50 0.32 SIDE_CHAIN REMARK 500 7 ARG A 71 0.32 SIDE_CHAIN REMARK 500 7 ARG A 88 0.32 SIDE_CHAIN REMARK 500 8 ARG A 4 0.29 SIDE_CHAIN REMARK 500 8 ARG A 9 0.31 SIDE_CHAIN REMARK 500 8 ARG A 25 0.30 SIDE_CHAIN REMARK 500 8 ARG A 34 0.31 SIDE_CHAIN REMARK 500 8 ARG A 46 0.29 SIDE_CHAIN REMARK 500 8 ARG A 48 0.30 SIDE_CHAIN REMARK 500 8 ARG A 50 0.32 SIDE_CHAIN REMARK 500 8 ARG A 71 0.28 SIDE_CHAIN REMARK 500 8 ARG A 88 0.32 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
DBREF 1T23 A 1 93 UNP P12770 HMC1_METTE 1 93
SEQRES 1 A 93 SER ASN THR ARG ASN PHE VAL LEU ARG ASP GLU ASP GLY SEQRES 2 A 93 ASN GLU HIS GLY VAL PHE THR GLY LYS GLN PRO ARG GLN SEQRES 3 A 93 ALA ALA LEU LYS ALA ALA ASN ARG GLY SER GLY THR LYS SEQRES 4 A 93 ALA ASN PRO ASP ILE ILE ARG LEU ARG GLU ARG GLY THR SEQRES 5 A 93 LYS LYS VAL HIS VAL PHE LYS ALA TRP LYS GLU ILE VAL SEQRES 6 A 93 ASP ALA PRO LYS ASN ARG PRO ALA TRP MET PRO GLU LYS SEQRES 7 A 93 ILE SER LYS PRO PHE VAL LYS LYS GLU ARG ILE GLU LYS SEQRES 8 A 93 LEU GLU
HELIX 1 1 ARG A 25 GLY A 35 1 11
SHEET 1 A 2 ARG A 4 LEU A 8 0 SHEET 2 A 2 GLY A 17 GLY A 21 -1 O GLY A 21 N ARG A 4 SHEET 1 B 3 ILE A 44 GLU A 49 0 SHEET 2 B 3 LYS A 54 ALA A 60 -1 O HIS A 56 N LEU A 47 SHEET 3 B 3 VAL A 84 LYS A 91 -1 O GLU A 90 N VAL A 55 SHEET 1 C 2 GLU A 63 VAL A 65 0 SHEET 2 C 2 ILE A 79 LYS A 81 -1 O LYS A 81 N GLU A 63
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000