10 20 30 40 50 60 70 80 1SPK - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 17-MAR-04 1SPK
TITLE SOLUTION STRUCTURE OF RSGI RUH-010, AN SH3 DOMAIN FROM TITLE 2 MOUSE CDNA
COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIKEN CDNA 1300006M19; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PUTATIVE SH3 DOMAIN(RESIDUES 343-401 IN SEQ. DB COMPND 5 NO.); COMPND 6 SYNONYM: RSGI RUH-010; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 ORGAN: LIVER; SOURCE 6 GENE: RIKEN CDNA 1300006M19; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P030120-88; SOURCE 9 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS STRUCTURAL GENOMICS, SH3 DOMAIN, FIVE-STRANDED BARREL, KEYWDS 2 MOUSE CDNA, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 3 RSGI, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR Y.SUZUKI,T.ABE,H.HIROTA,F.HAYASHI,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1SPK 1 VERSN REVDAT 1 17-SEP-04 1SPK 0
JRNL AUTH Y.SUZUKI,T.ABE,H.HIROTA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RSGI RUH-010, AN SH3 DOMAIN JRNL TITL 2 FROM MOUSE CDNA JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.7 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1SPK COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAR-04. REMARK 100 THE RCSB ID CODE IS RCSB021897.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0MM PROTEIN; 20MM SODIUM REMARK 210 PHOSPHATE; 100MM NACL; 1MM D- REMARK 210 DTT; 0.02% NAN3; 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20020425, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.853 REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 8 169.81 -45.22 REMARK 500 1 HIS A 16 99.60 -166.25 REMARK 500 1 ASN A 20 -55.60 80.50 REMARK 500 1 ASP A 31 150.88 -47.48 REMARK 500 1 ASP A 50 45.26 -87.96 REMARK 500 1 THR A 51 -72.43 -156.68 REMARK 500 1 LYS A 53 -0.70 78.50 REMARK 500 1 LEU A 66 -178.66 -60.44 REMARK 500 1 SER A 70 73.01 -151.48 REMARK 500 2 GLN A 8 170.60 -52.67 REMARK 500 2 ASN A 21 160.15 -43.60 REMARK 500 2 THR A 23 -46.49 -170.01 REMARK 500 2 ASP A 50 45.89 -87.82 REMARK 500 2 THR A 51 -76.77 -153.79 REMARK 500 2 LEU A 66 -168.31 -62.10 REMARK 500 2 SER A 70 124.02 69.14 REMARK 500 3 SER A 5 146.01 66.46 REMARK 500 3 GLN A 8 169.27 -44.69 REMARK 500 3 HIS A 16 96.34 -165.32 REMARK 500 3 ASN A 20 -60.53 72.99 REMARK 500 3 ASP A 50 41.74 -90.16 REMARK 500 3 THR A 51 -83.28 -159.19 REMARK 500 3 LEU A 66 178.68 -58.11 REMARK 500 3 SER A 67 95.16 -162.83 REMARK 500 3 SER A 70 -57.98 -156.20 REMARK 500 4 SER A 2 -59.60 -138.14 REMARK 500 4 SER A 6 93.05 62.92 REMARK 500 4 GLN A 8 168.09 -46.75 REMARK 500 4 HIS A 16 79.15 -161.78 REMARK 500 4 ASN A 20 -58.73 77.29 REMARK 500 4 ASP A 31 151.09 -46.27 REMARK 500 4 ASP A 42 66.87 60.01 REMARK 500 4 ASP A 50 43.77 -88.72 REMARK 500 4 THR A 51 -66.41 -156.60 REMARK 500 4 LYS A 53 -0.47 78.41 REMARK 500 4 SER A 71 99.70 53.59 REMARK 500 5 SER A 5 130.71 -174.24 REMARK 500 5 HIS A 16 81.95 -163.13 REMARK 500 5 ASN A 20 -52.67 -139.64 REMARK 500 5 ASP A 50 45.23 -88.05 REMARK 500 5 THR A 51 -69.94 -157.87 REMARK 500 5 LYS A 53 -0.88 78.49 REMARK 500 5 SER A 70 88.96 57.96 REMARK 500 5 SER A 71 86.47 47.33 REMARK 500 6 SER A 2 81.59 64.60 REMARK 500 6 GLN A 8 169.08 -44.68 REMARK 500 6 HIS A 16 95.32 -161.35 REMARK 500 6 ASP A 31 151.90 -48.16 REMARK 500 6 ASP A 50 44.40 -90.63 REMARK 500 6 THR A 51 -79.54 -161.15 REMARK 500 6 LEU A 66 174.09 -58.95 REMARK 500 6 SER A 71 88.94 44.87 REMARK 500 7 SER A 5 146.30 -179.03 REMARK 500 7 GLN A 8 170.47 -54.21 REMARK 500 7 ASN A 20 -66.69 79.90 REMARK 500 7 ASN A 21 -156.36 39.08 REMARK 500 7 LYS A 22 -50.54 -122.82 REMARK 500 7 ASP A 31 152.64 -45.62 REMARK 500 7 ASP A 50 44.51 -88.25 REMARK 500 7 THR A 51 -78.19 -153.51 REMARK 500 7 LEU A 66 174.80 -59.62 REMARK 500 8 SER A 3 107.38 -49.28 REMARK 500 8 SER A 5 112.41 -174.39 REMARK 500 8 GLN A 8 169.16 -44.90 REMARK 500 8 HIS A 16 76.54 -160.84 REMARK 500 8 ASN A 21 175.54 -48.65 REMARK 500 8 LYS A 22 -47.02 -137.11 REMARK 500 8 ASP A 50 46.02 -93.01 REMARK 500 8 THR A 51 -69.10 -159.18 REMARK 500 8 LYS A 53 -0.70 78.48 REMARK 500 8 LEU A 66 171.45 -58.97 REMARK 500 8 SER A 71 160.80 60.44 REMARK 500 9 SER A 5 75.87 61.44 REMARK 500 9 GLN A 8 168.66 -44.45 REMARK 500 9 HIS A 16 80.02 -156.09 REMARK 500 9 ASN A 20 -57.28 -131.99 REMARK 500 9 ASN A 21 157.98 -46.56 REMARK 500 9 ASP A 50 45.37 -88.40 REMARK 500 9 THR A 51 -70.74 -153.81 REMARK 500 9 SER A 70 113.00 60.31 REMARK 500 9 SER A 71 97.74 49.38 REMARK 500 10 SER A 3 143.38 -177.57 REMARK 500 10 SER A 5 -70.61 -113.69 REMARK 500 10 GLN A 8 170.23 -52.63 REMARK 500 10 HIS A 16 92.33 -161.37 REMARK 500 10 ASN A 20 -50.93 -130.33 REMARK 500 10 ASN A 21 154.76 -43.20 REMARK 500 10 LYS A 41 52.41 -98.30 REMARK 500 10 ASP A 50 43.76 -88.82 REMARK 500 10 THR A 51 -84.28 -157.52 REMARK 500 10 LEU A 66 170.80 -59.93 REMARK 500 10 SER A 70 142.31 63.71 REMARK 500 11 SER A 3 76.82 -159.72 REMARK 500 11 HIS A 16 95.60 -161.16 REMARK 500 11 ALA A 18 -61.24 -91.51 REMARK 500 11 LYS A 22 -59.05 73.73 REMARK 500 11 LYS A 41 -166.70 -66.66 REMARK 500 11 ASP A 50 43.50 -89.68 REMARK 500 11 THR A 51 -77.58 -162.90 REMARK 500 11 SER A 71 -58.69 -121.74 REMARK 500 12 SER A 2 166.98 55.86 REMARK 500 12 GLN A 8 169.22 -44.78 REMARK 500 12 THR A 23 -40.04 -172.49 REMARK 500 12 LEU A 24 108.68 -48.86 REMARK 500 12 PHE A 27 -177.89 -174.35 REMARK 500 12 ASP A 42 70.60 57.68 REMARK 500 12 ASP A 50 46.00 -87.93 REMARK 500 12 THR A 51 -67.99 -156.97 REMARK 500 12 LYS A 53 -0.42 78.53 REMARK 500 12 SER A 71 -59.09 74.83 REMARK 500 13 SER A 3 97.05 54.30 REMARK 500 13 ASN A 20 -67.28 80.42 REMARK 500 13 ASN A 21 170.73 -52.30 REMARK 500 13 THR A 23 -43.13 -167.03 REMARK 500 13 ASP A 31 150.10 -41.89 REMARK 500 13 ASP A 42 39.58 173.73 REMARK 500 13 ASP A 50 45.06 -87.74 REMARK 500 13 THR A 51 -72.74 -157.33 REMARK 500 14 SER A 3 83.12 44.36 REMARK 500 14 HIS A 16 91.61 -160.26 REMARK 500 14 ASN A 20 -68.85 80.46 REMARK 500 14 ASP A 50 45.80 -87.04 REMARK 500 14 THR A 51 -75.03 -153.40 REMARK 500 14 SER A 67 89.83 -155.02 REMARK 500 14 SER A 70 93.43 -66.29 REMARK 500 15 GLN A 8 169.81 -45.24 REMARK 500 15 HIS A 16 86.74 -158.87 REMARK 500 15 LYS A 41 -163.33 -65.16 REMARK 500 15 ASP A 50 45.42 -87.50 REMARK 500 15 THR A 51 -93.12 -159.64 REMARK 500 15 LEU A 66 171.71 -55.22 REMARK 500 15 SER A 71 156.57 68.44 REMARK 500 16 SER A 3 82.79 50.94 REMARK 500 16 SER A 5 -97.27 -139.22 REMARK 500 16 SER A 6 91.63 -56.30 REMARK 500 16 ASN A 20 -62.15 79.03 REMARK 500 16 ASN A 21 179.62 -56.07 REMARK 500 16 LYS A 22 -62.53 -131.65 REMARK 500 16 LEU A 36 43.75 -145.52 REMARK 500 16 LYS A 41 51.83 -92.74 REMARK 500 16 ASP A 50 47.64 -85.49 REMARK 500 16 THR A 51 -76.87 -158.42 REMARK 500 16 SER A 71 145.21 -174.30 REMARK 500 17 ASN A 20 -59.14 80.98 REMARK 500 17 LYS A 22 -54.73 -120.70 REMARK 500 17 GLN A 29 118.52 -39.54 REMARK 500 17 ASP A 31 153.35 -49.65 REMARK 500 17 ASP A 50 43.13 -89.29 REMARK 500 17 THR A 51 -71.50 -154.01 REMARK 500 17 LEU A 66 171.38 -55.83 REMARK 500 17 SER A 71 154.11 59.56 REMARK 500 18 SER A 2 -58.59 -121.89 REMARK 500 18 GLN A 8 170.39 -51.10 REMARK 500 18 ALA A 18 15.77 -141.88 REMARK 500 18 ASP A 31 152.01 -47.94 REMARK 500 18 ASP A 42 32.59 75.24 REMARK 500 18 ASP A 50 50.51 -98.81 REMARK 500 18 THR A 51 -44.08 -155.78 REMARK 500 18 LYS A 53 -2.84 79.44 REMARK 500 18 LEU A 66 171.22 -55.35 REMARK 500 18 SER A 71 -58.75 -136.12 REMARK 500 19 HIS A 16 84.22 -171.29 REMARK 500 19 ASN A 20 -55.01 80.20 REMARK 500 19 ASN A 21 169.78 -49.90 REMARK 500 19 LYS A 22 -57.87 -126.94 REMARK 500 19 LEU A 25 -150.73 -76.93 REMARK 500 19 SER A 26 119.63 -167.37 REMARK 500 19 GLN A 29 118.71 -38.36 REMARK 500 19 ASP A 31 154.83 -48.36 REMARK 500 19 ASP A 50 46.27 -96.39 REMARK 500 19 THR A 51 -72.66 -161.68 REMARK 500 19 LYS A 53 -3.73 80.20 REMARK 500 20 SER A 3 98.70 53.81 REMARK 500 20 HIS A 16 101.10 -164.72 REMARK 500 20 ASP A 50 46.14 -92.87 REMARK 500 20 THR A 51 -75.23 -155.99 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007006892.1 RELATED DB: TARGETDB
DBREF 1SPK A 8 66 UNP Q9DBJ3 Q9DBJ3_MOUSE 343 401
SEQADV 1SPK GLY A 1 UNP Q9DBJ3 CLONING ARTIFACT SEQADV 1SPK SER A 2 UNP Q9DBJ3 CLONING ARTIFACT SEQADV 1SPK SER A 3 UNP Q9DBJ3 CLONING ARTIFACT SEQADV 1SPK GLY A 4 UNP Q9DBJ3 CLONING ARTIFACT SEQADV 1SPK SER A 5 UNP Q9DBJ3 CLONING ARTIFACT SEQADV 1SPK SER A 6 UNP Q9DBJ3 CLONING ARTIFACT SEQADV 1SPK GLY A 7 UNP Q9DBJ3 CLONING ARTIFACT SEQADV 1SPK SER A 67 UNP Q9DBJ3 CLONING ARTIFACT SEQADV 1SPK GLY A 68 UNP Q9DBJ3 CLONING ARTIFACT SEQADV 1SPK PRO A 69 UNP Q9DBJ3 CLONING ARTIFACT SEQADV 1SPK SER A 70 UNP Q9DBJ3 CLONING ARTIFACT SEQADV 1SPK SER A 71 UNP Q9DBJ3 CLONING ARTIFACT SEQADV 1SPK GLY A 72 UNP Q9DBJ3 CLONING ARTIFACT
SEQRES 1 A 72 GLY SER SER GLY SER SER GLY GLN LYS VAL LYS THR ILE SEQRES 2 A 72 PHE PRO HIS THR ALA GLY ASN ASN LYS THR LEU LEU SER SEQRES 3 A 72 PHE ALA GLN GLY ASP VAL LEU THR LEU LEU ILE PRO GLU SEQRES 4 A 72 GLU LYS ASP GLY TRP LEU TYR GLY GLU HIS ASP THR THR SEQRES 5 A 72 LYS ALA ARG GLY TRP PHE PRO SER SER TYR THR LYS LEU SEQRES 6 A 72 LEU SER GLY PRO SER SER GLY
HELIX 1 1 SER A 60 TYR A 62 5 3
SHEET 1 A 5 ARG A 55 PRO A 59 0 SHEET 2 A 5 TRP A 44 HIS A 49 -1 N LEU A 45 O PHE A 58 SHEET 3 A 5 VAL A 32 LEU A 35 -1 N THR A 34 O GLU A 48 SHEET 4 A 5 LYS A 9 THR A 12 -1 N VAL A 10 O LEU A 33 SHEET 5 A 5 THR A 63 LEU A 65 -1 O LYS A 64 N LYS A 11
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000