10 20 30 40 50 60 70 80 1SOH - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LIPID TRANSPORT 14-MAR-04 1SOH
TITLE THE STRUCTURE OF HUMAN APOLIPOPROTEIN C-II IN DODECYL TITLE 2 PHOSPHOCHOLINE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: APOLIPOPROTEIN C-II; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: APO-CII, APOC-II, APC2; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: APOC2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS LIPID TRANSPORT
EXPDTA SOLUTION NMR
NUMMDL 18
AUTHOR C.A.MACRAILD,G.J.HOWLETT,P.R.GOOLEY
REVDAT 3 28-APR-09 1SOH 1 REMARK REVDAT 2 24-FEB-09 1SOH 1 VERSN REVDAT 1 27-JUL-04 1SOH 0
JRNL AUTH C.A.MACRAILD,G.J.HOWLETT,P.R.GOOLEY JRNL TITL THE STRUCTURE AND INTERACTIONS OF HUMAN JRNL TITL 2 APOLIPOPROTEIN C-II IN DODECYL PHOSPHOCHOLINE JRNL REF BIOCHEMISTRY V. 43 8084 2004 JRNL REFN ISSN 0006-2960 JRNL PMID 15209504 JRNL DOI 10.1021/BI049817L
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER, A. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1SOH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAR-04. REMARK 100 THE RCSB ID CODE IS RCSB021875.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.8 MM U-15N APOC-II,85 MM REMARK 210 DPC, 20 MM SODIUM ACETATE, 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_ REMARK 210 15N-SEPARATED TOCSY; HNHA; HNHB REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, XEASY 1.2, CNS 1.0 REMARK 210 METHOD USED : TORSION ANGLE SIMULATED REMARK 210 ANNEALING WITH FINAL CARTESIAN REMARK 210 REFINEMENT STAGE REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 18 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH MINIMAL REMARK 210 RESTRAINT VIOLATIONS AND REMARK 210 FAVOURABLE NON-BOND ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-18 REMARK 465 RES C SSSEQI REMARK 465 THR A 1 REMARK 465 GLN A 2 REMARK 465 GLN A 3 REMARK 465 PRO A 4 REMARK 465 GLN A 5 REMARK 465 GLN A 6 REMARK 465 ASP A 7 REMARK 465 GLU A 8 REMARK 465 MET A 9 REMARK 465 PRO A 10 REMARK 465 SER A 11 REMARK 465 PRO A 12
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 43 -28.52 -38.99 REMARK 500 1 ALA A 44 25.68 -163.42 REMARK 500 1 LYS A 48 -53.69 -155.23 REMARK 500 1 LEU A 49 42.24 -88.82 REMARK 500 1 ARG A 50 -25.36 179.96 REMARK 500 1 TYR A 53 -45.97 -131.23 REMARK 500 1 THR A 57 21.33 -146.35 REMARK 500 1 SER A 61 -71.50 -82.28 REMARK 500 1 THR A 62 7.72 59.59 REMARK 500 1 LYS A 76 113.93 -175.40 REMARK 500 2 PHE A 14 -44.33 82.45 REMARK 500 2 THR A 40 -77.03 -108.39 REMARK 500 2 LEU A 42 104.42 57.19 REMARK 500 2 THR A 57 21.04 -149.15 REMARK 500 2 SER A 61 -72.62 -93.19 REMARK 500 2 THR A 62 7.64 59.99 REMARK 500 2 LYS A 76 112.84 -170.51 REMARK 500 3 SER A 21 -53.91 -121.67 REMARK 500 3 LYS A 39 30.86 -98.91 REMARK 500 3 THR A 40 -45.02 -149.48 REMARK 500 3 TYR A 41 32.27 -98.71 REMARK 500 3 PRO A 43 34.09 -86.13 REMARK 500 3 LYS A 48 -57.25 -163.51 REMARK 500 3 THR A 57 21.53 -146.89 REMARK 500 3 LYS A 76 115.46 -177.68 REMARK 500 4 LYS A 39 26.55 -149.71 REMARK 500 4 THR A 40 -58.72 -130.38 REMARK 500 4 LEU A 42 85.95 172.87 REMARK 500 4 PRO A 43 36.38 -86.27 REMARK 500 4 ALA A 44 17.15 -146.04 REMARK 500 4 LYS A 48 -47.25 -130.80 REMARK 500 4 ASP A 51 -41.42 -136.32 REMARK 500 4 TYR A 53 -44.78 -137.11 REMARK 500 5 THR A 40 -35.89 -131.57 REMARK 500 5 TYR A 41 31.55 -96.39 REMARK 500 5 LYS A 48 -58.49 -165.45 REMARK 500 5 LYS A 55 19.53 54.14 REMARK 500 5 LYS A 76 114.95 -178.29 REMARK 500 6 THR A 40 -30.88 -175.66 REMARK 500 6 LYS A 48 -61.24 -171.51 REMARK 500 6 LEU A 49 29.64 49.11 REMARK 500 6 THR A 57 21.50 -147.18 REMARK 500 6 LYS A 76 114.76 -175.02 REMARK 500 7 THR A 40 11.84 -143.97 REMARK 500 7 TYR A 41 31.79 -142.90 REMARK 500 7 LEU A 42 -68.01 -134.51 REMARK 500 7 ALA A 44 30.36 -169.12 REMARK 500 7 ARG A 50 -44.11 164.23 REMARK 500 7 ASP A 51 34.66 161.21 REMARK 500 7 LYS A 55 19.14 57.09 REMARK 500 7 THR A 57 22.72 -149.39 REMARK 500 7 LYS A 76 115.08 -177.49 REMARK 500 8 LYS A 39 31.20 -142.09 REMARK 500 8 TYR A 41 29.02 -161.82 REMARK 500 8 ALA A 44 18.15 -146.28 REMARK 500 8 SER A 54 20.87 -75.32 REMARK 500 8 LYS A 55 -15.83 -149.57 REMARK 500 8 THR A 62 6.56 59.85 REMARK 500 8 LYS A 76 112.77 -164.04 REMARK 500 9 LYS A 39 30.65 -141.48 REMARK 500 9 THR A 40 -43.90 -154.63 REMARK 500 9 LEU A 42 -57.18 -143.82 REMARK 500 9 PRO A 43 46.19 -87.09 REMARK 500 9 LYS A 48 48.88 170.92 REMARK 500 9 LEU A 49 31.33 -98.87 REMARK 500 9 ARG A 50 -37.52 179.70 REMARK 500 9 LYS A 55 16.07 59.97 REMARK 500 9 THR A 57 21.82 -144.64 REMARK 500 9 LYS A 76 107.16 -162.57 REMARK 500 10 THR A 40 -44.47 -156.71 REMARK 500 10 LYS A 48 -57.47 -160.83 REMARK 500 10 LEU A 49 -4.56 64.40 REMARK 500 10 ARG A 50 -29.48 162.05 REMARK 500 10 ASP A 51 32.61 165.62 REMARK 500 10 TYR A 53 -66.16 -104.66 REMARK 500 10 THR A 57 20.89 -144.42 REMARK 500 10 LYS A 76 113.39 -167.38 REMARK 500 11 THR A 40 -77.45 -113.33 REMARK 500 11 TYR A 41 31.17 -149.27 REMARK 500 11 LYS A 48 -71.34 -176.94 REMARK 500 11 LEU A 49 -37.18 77.02 REMARK 500 11 ARG A 50 38.73 170.54 REMARK 500 11 LYS A 55 -19.32 -150.08 REMARK 500 11 LYS A 76 115.44 -177.42 REMARK 500 12 PHE A 14 -44.42 82.71 REMARK 500 12 LYS A 48 -58.13 -164.59 REMARK 500 12 LEU A 49 41.27 -85.84 REMARK 500 12 ARG A 50 -26.88 -179.16 REMARK 500 12 LYS A 55 -22.92 -167.86 REMARK 500 12 LYS A 76 92.35 163.63 REMARK 500 12 GLU A 78 38.51 -155.16 REMARK 500 13 THR A 40 -42.93 -153.87 REMARK 500 13 TYR A 41 32.10 -97.80 REMARK 500 13 ALA A 44 41.59 169.62 REMARK 500 13 VAL A 45 37.27 -86.92 REMARK 500 13 ASP A 46 31.91 70.92 REMARK 500 13 GLU A 47 26.23 92.66 REMARK 500 13 LYS A 48 41.28 80.35 REMARK 500 13 SER A 61 64.88 -163.09 REMARK 500 13 LYS A 76 113.73 -173.61 REMARK 500 14 ALA A 32 36.39 -177.98 REMARK 500 14 THR A 40 -77.32 -117.51 REMARK 500 14 TYR A 41 30.03 -147.23 REMARK 500 14 LEU A 42 64.97 39.10 REMARK 500 14 LYS A 48 -64.70 -164.34 REMARK 500 14 TYR A 53 -60.74 -95.63 REMARK 500 14 LYS A 55 -28.55 178.01 REMARK 500 14 THR A 57 21.89 -146.63 REMARK 500 14 SER A 61 56.36 -146.04 REMARK 500 14 LYS A 76 114.05 -171.12 REMARK 500 15 LYS A 48 -55.85 -163.87 REMARK 500 15 LEU A 49 40.81 -86.56 REMARK 500 15 ARG A 50 -30.14 -170.70 REMARK 500 15 THR A 57 20.32 -144.86 REMARK 500 15 LYS A 76 93.61 165.63 REMARK 500 15 GLU A 78 42.02 -155.21 REMARK 500 16 LEU A 42 102.70 54.19 REMARK 500 16 PRO A 43 -77.77 -58.80 REMARK 500 16 ALA A 44 23.66 -162.66 REMARK 500 16 LYS A 48 -61.73 -148.74 REMARK 500 16 ARG A 50 15.09 -141.14 REMARK 500 16 TYR A 53 -56.82 -130.48 REMARK 500 16 LYS A 55 17.98 57.05 REMARK 500 16 THR A 57 22.00 -147.24 REMARK 500 16 LYS A 76 113.31 -170.58 REMARK 500 17 PHE A 14 -44.32 82.51 REMARK 500 17 ALA A 44 21.17 -159.73 REMARK 500 17 LYS A 48 49.15 178.45 REMARK 500 17 ARG A 50 29.63 -164.83 REMARK 500 17 TYR A 53 -51.19 -123.28 REMARK 500 17 LYS A 55 17.04 59.80 REMARK 500 17 THR A 57 21.30 -142.30 REMARK 500 17 LYS A 76 116.84 -177.88 REMARK 500 18 THR A 40 -44.45 -132.84 REMARK 500 18 ALA A 44 32.24 177.03 REMARK 500 18 LYS A 48 -52.80 -157.39 REMARK 500 18 THR A 57 22.03 -145.35 REMARK 500 18 LYS A 76 112.65 -165.25 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1I5J RELATED DB: PDB REMARK 900 STRUCTURE OF APOC-II IN SDS
DBREF 1SOH A 1 79 UNP P02655 APOC2_HUMAN 23 101
SEQRES 1 A 79 THR GLN GLN PRO GLN GLN ASP GLU MET PRO SER PRO THR SEQRES 2 A 79 PHE LEU THR GLN VAL LYS GLU SER LEU SER SER TYR TRP SEQRES 3 A 79 GLU SER ALA LYS THR ALA ALA GLN ASN LEU TYR GLU LYS SEQRES 4 A 79 THR TYR LEU PRO ALA VAL ASP GLU LYS LEU ARG ASP LEU SEQRES 5 A 79 TYR SER LYS SER THR ALA ALA MET SER THR TYR THR GLY SEQRES 6 A 79 ILE PHE THR ASP GLN VAL LEU SER VAL LEU LYS GLY GLU SEQRES 7 A 79 GLU
HELIX 1 1 THR A 13 SER A 23 1 11 HELIX 2 2 GLU A 27 ALA A 32 1 6 HELIX 3 3 ALA A 32 TYR A 37 1 6 HELIX 4 4 GLU A 38 THR A 40 5 3 HELIX 5 5 TYR A 41 ASP A 46 1 6 HELIX 6 6 THR A 57 THR A 62 1 6 HELIX 7 7 THR A 62 PHE A 67 1 6 HELIX 8 8 THR A 68 SER A 73 1 6
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000