10 20 30 40 50 60 70 80 1SLE - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER COMPLEX(BIOTIN-BINDING PROTEIN/PEPTIDE) 10-MAR-95 1SLE
TITLE STREPTAVIDIN, PH 5.0, BOUND TO CYCLIC PEPTIDE AC-CHPQGPPC- TITLE 2 NH2
COMPND MOL_ID: 1; COMPND 2 MOLECULE: STREPTAVIDIN; COMPND 3 CHAIN: B, D; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: AC-CHPQGPPC-NH2; COMPND 6 CHAIN: M, P
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES AVIDINII; SOURCE 3 ORGANISM_TAXID: 1895; SOURCE 4 MOL_ID: 2
KEYWDS COMPLEX(BIOTIN-BINDING PROTEIN/PEPTIDE)
EXPDTA X-RAY DIFFRACTION
AUTHOR B.A.KATZ
REVDAT 2 24-FEB-09 1SLE 1 VERSN REVDAT 1 03-APR-96 1SLE 0
JRNL AUTH B.A.KATZ JRNL TITL BINDING TO PROTEIN TARGETS OF PEPTIDIC LEADS JRNL TITL 2 DISCOVERED BY PHAGE DISPLAY: CRYSTAL STRUCTURES OF JRNL TITL 3 STREPTAVIDIN-BOUND LINEAR AND CYCLIC PEPTIDE JRNL TITL 4 LIGANDS CONTAINING THE HPQ SEQUENCE JRNL REF BIOCHEMISTRY V. 34 15421 1995 JRNL REFN ISSN 0006-2960 JRNL PMID 7492542 JRNL DOI 10.1021/BI00047A005
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 7.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 14948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2374 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.018 REMARK 3 BOND ANGLES (DEGREES) : 3.20 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 27.90 REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CRYST1 CELL AXES CHOSEN TO REMARK 3 CORRESPOND TO COORDINATES OF STREPTAVIDIN DEPOSITED BY WEBER REMARK 3 ET AL. IN THE PDB (ENTRY 1PTS).
REMARK 4 REMARK 4 1SLE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : SIEMENS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SADIE, SAINT (SIEMENS) REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16042 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 56.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 5.0
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 48.82500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.80500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 24.73000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 48.82500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.80500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.73000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 48.82500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 53.80500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 24.73000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 48.82500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 53.80500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 24.73000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MTRIX REMARK 300 THE TRANSFORMATIONS PRESENTED ON MTRIX RECORDS BELOW REMARK 300 DESCRIBE NON-CRYSTALLOGRAPHIC RELATIONSHIPS AMONG THE REMARK 300 VARIOUS DOMAINS IN THIS ENTRY. APPLYING THE APPROPRIATE REMARK 300 MTRIX TRANSFORMATION TO THE RESIDUES LISTED FIRST WILL REMARK 300 YIELD APPROXIMATE COORDINATES FOR THE RESIDUES LISTED REMARK 300 SECOND. REMARK 300 REMARK 300 APPLIED TO TRANSFORMED TO REMARK 300 MTRIX RESIDUES RESIDUES RMSD REMARK 300 M1 B 13 .. M 8 D 13 .. P 8 0.646 REMARK 300 REMARK 300 SYMMETRY REMARK 300 THE CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS PRESENTED REMARK 300 BELOW GENERATE THE SUBUNITS OF THE POLYMERIC MOLECULE. REMARK 300 REMARK 300 STREPTAVIDIN IS A TETRAMERIC PROTEIN. THE REMARK 300 CRYSTALLOGRAPHIC TRANSFORMATION GIVEN HERE GENERATES THE REMARK 300 TETRAMER FROM THE DIMER FOUND IN THE ASYMMETRIC UNIT OF REMARK 300 THE CRYSTALS. REMARK 300 REMARK 300 APPLIED TO RESIDUES: B 13 .. B 133 REMARK 300 D 13 .. D 133 REMARK 300 M 2 .. M 6 REMARK 300 P 1 .. P 6 REMARK 300 REMARK 300 SYMMETRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 300 SYMMETRY2 1 0.000000 -1.000000 0.000000 0.00000 REMARK 300 SYMMETRY3 1 0.000000 0.000000 -1.000000 0.00000
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, M, D, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 LYS B 4 REMARK 465 ASP B 5 REMARK 465 SER B 6 REMARK 465 LYS B 7 REMARK 465 ALA B 8 REMARK 465 GLN B 9 REMARK 465 VAL B 10 REMARK 465 SER B 11 REMARK 465 ALA B 12 REMARK 465 LYS B 134 REMARK 465 PRO B 135 REMARK 465 ASP D 1 REMARK 465 PRO D 2 REMARK 465 SER D 3 REMARK 465 LYS D 4 REMARK 465 ASP D 5 REMARK 465 SER D 6 REMARK 465 LYS D 7 REMARK 465 ALA D 8 REMARK 465 GLN D 9 REMARK 465 VAL D 10 REMARK 465 SER D 11 REMARK 465 ALA D 12 REMARK 465 LYS D 134 REMARK 465 PRO D 135
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ACE M 0 O
REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG B 53 NE NH1 NH2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS B 87 NE2 HIS B 87 CD2 -0.067 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP B 75 CD1 - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP B 75 CB - CG - CD1 ANGL. DEV. = -8.4 DEGREES REMARK 500 TRP B 75 CE2 - CD2 - CG ANGL. DEV. = -6.3 DEGREES REMARK 500 TRP B 75 CG - CD2 - CE3 ANGL. DEV. = 6.6 DEGREES REMARK 500 TRP B 79 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP B 79 CE2 - CD2 - CG ANGL. DEV. = -5.4 DEGREES REMARK 500 TRP B 92 CD1 - CG - CD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 TRP B 92 CE2 - CD2 - CG ANGL. DEV. = -4.9 DEGREES REMARK 500 TRP B 108 CD1 - CG - CD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP B 108 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 TRP B 120 CD1 - CG - CD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 TRP B 120 CE2 - CD2 - CG ANGL. DEV. = -5.3 DEGREES REMARK 500 TRP D 21 CD1 - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP D 21 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 TYR D 43 CB - CG - CD2 ANGL. DEV. = -3.9 DEGREES REMARK 500 GLU D 51 CA - C - N ANGL. DEV. = -17.0 DEGREES REMARK 500 TRP D 75 CD1 - CG - CD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 TRP D 75 CE2 - CD2 - CG ANGL. DEV. = -5.3 DEGREES REMARK 500 TRP D 79 CD1 - CG - CD2 ANGL. DEV. = 5.3 DEGREES REMARK 500 TRP D 79 CE2 - CD2 - CG ANGL. DEV. = -5.4 DEGREES REMARK 500 TRP D 92 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP D 92 CB - CG - CD1 ANGL. DEV. = -8.1 DEGREES REMARK 500 TRP D 92 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 TYR D 96 CB - CG - CD2 ANGL. DEV. = -3.9 DEGREES REMARK 500 TRP D 108 CD1 - CG - CD2 ANGL. DEV. = 4.8 DEGREES REMARK 500 TRP D 108 CE2 - CD2 - CG ANGL. DEV. = -5.3 DEGREES REMARK 500 TRP D 120 CD1 - CG - CD2 ANGL. DEV. = 5.1 DEGREES REMARK 500 TRP D 120 CE2 - CD2 - CG ANGL. DEV. = -5.4 DEGREES REMARK 500 LYS D 121 CA - CB - CG ANGL. DEV. = 13.5 DEGREES REMARK 500 CYS P 8 CA - CB - SG ANGL. DEV. = 7.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 45 -130.33 -98.62 REMARK 500 ALA B 46 92.04 -33.05 REMARK 500 VAL B 47 70.07 22.56 REMARK 500 ASN B 49 173.01 61.81 REMARK 500 ASP B 67 -85.34 -173.09 REMARK 500 PRO M 7 107.31 -57.26 REMARK 500 SER D 45 -154.06 -93.58 REMARK 500 ALA D 46 42.78 34.55 REMARK 500 VAL D 47 55.70 34.27 REMARK 500 ASN D 49 161.87 64.96 REMARK 500 ALA D 50 -83.26 -73.11 REMARK 500 GLU D 51 73.51 -111.92 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH P 971 DISTANCE = 7.01 ANGSTROMS REMARK 525 HOH D 921 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B 928 DISTANCE = 5.20 ANGSTROMS REMARK 525 HOH B 960 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH D 956 DISTANCE = 9.03 ANGSTROMS REMARK 525 HOH B 969 DISTANCE = 5.03 ANGSTROMS REMARK 525 HOH D 986 DISTANCE = 5.36 ANGSTROMS
DBREF 1SLE B 1 135 UNP P22629 SAV_STRAV 25 159 DBREF 1SLE D 1 135 UNP P22629 SAV_STRAV 25 159 DBREF 1SLE M 0 9 PDB 1SLE 1SLE 0 9 DBREF 1SLE P 0 9 PDB 1SLE 1SLE 0 9
SEQRES 1 B 135 ASP PRO SER LYS ASP SER LYS ALA GLN VAL SER ALA ALA SEQRES 2 B 135 GLU ALA GLY ILE THR GLY THR TRP TYR ASN GLN LEU GLY SEQRES 3 B 135 SER THR PHE ILE VAL THR ALA GLY ALA ASP GLY ALA LEU SEQRES 4 B 135 THR GLY THR TYR GLU SER ALA VAL GLY ASN ALA GLU SER SEQRES 5 B 135 ARG TYR VAL LEU THR GLY ARG TYR ASP SER ALA PRO ALA SEQRES 6 B 135 THR ASP GLY SER GLY THR ALA LEU GLY TRP THR VAL ALA SEQRES 7 B 135 TRP LYS ASN ASN TYR ARG ASN ALA HIS SER ALA THR THR SEQRES 8 B 135 TRP SER GLY GLN TYR VAL GLY GLY ALA GLU ALA ARG ILE SEQRES 9 B 135 ASN THR GLN TRP LEU LEU THR SER GLY THR THR GLU ALA SEQRES 10 B 135 ASN ALA TRP LYS SER THR LEU VAL GLY HIS ASP THR PHE SEQRES 11 B 135 THR LYS VAL LYS PRO SEQRES 1 M 10 ACE CYS HIS PRO GLN GLY PRO PRO CYS NH2 SEQRES 1 D 135 ASP PRO SER LYS ASP SER LYS ALA GLN VAL SER ALA ALA SEQRES 2 D 135 GLU ALA GLY ILE THR GLY THR TRP TYR ASN GLN LEU GLY SEQRES 3 D 135 SER THR PHE ILE VAL THR ALA GLY ALA ASP GLY ALA LEU SEQRES 4 D 135 THR GLY THR TYR GLU SER ALA VAL GLY ASN ALA GLU SER SEQRES 5 D 135 ARG TYR VAL LEU THR GLY ARG TYR ASP SER ALA PRO ALA SEQRES 6 D 135 THR ASP GLY SER GLY THR ALA LEU GLY TRP THR VAL ALA SEQRES 7 D 135 TRP LYS ASN ASN TYR ARG ASN ALA HIS SER ALA THR THR SEQRES 8 D 135 TRP SER GLY GLN TYR VAL GLY GLY ALA GLU ALA ARG ILE SEQRES 9 D 135 ASN THR GLN TRP LEU LEU THR SER GLY THR THR GLU ALA SEQRES 10 D 135 ASN ALA TRP LYS SER THR LEU VAL GLY HIS ASP THR PHE SEQRES 11 D 135 THR LYS VAL LYS PRO SEQRES 1 P 10 ACE CYS HIS PRO GLN GLY PRO PRO CYS NH2
HET ACE M 0 3 HET NH2 M 9 3 HET ACE P 0 3 HET NH2 P 9 3
HETNAM ACE ACETYL GROUP HETNAM NH2 AMINO GROUP
FORMUL 2 ACE 2(C2 H4 O) FORMUL 2 NH2 2(H2 N) FORMUL 5 HOH *130(H2 O)
HELIX 1 1 GLU B 14 ILE B 17 1 4 HELIX 2 2 GLU B 116 LYS B 121 5 6 HELIX 3 3 GLU D 14 ILE D 17 1 4 HELIX 4 4 GLU D 116 LYS D 121 5 6
SHEET 1 A 9 THR B 28 VAL B 31 0 SHEET 2 A 9 GLY B 19 ASN B 23 -1 N TRP B 21 O PHE B 29 SHEET 3 A 9 THR B 123 LYS B 132 -1 N THR B 131 O TYR B 22 SHEET 4 A 9 ARG B 103 SER B 112 -1 N LEU B 110 O LEU B 124 SHEET 5 A 9 SER B 88 VAL B 97 -1 N VAL B 97 O ARG B 103 SHEET 6 A 9 THR B 71 ALA B 78 -1 N VAL B 77 O THR B 90 SHEET 7 A 9 ARG B 53 TYR B 60 -1 N ARG B 59 O GLY B 74 SHEET 8 A 9 ALA B 38 GLU B 44 -1 N TYR B 43 O TYR B 54 SHEET 9 A 9 THR B 28 ALA B 33 -1 N THR B 32 O THR B 40 SHEET 1 B 8 GLY D 19 TYR D 22 0 SHEET 2 B 8 THR D 28 ALA D 33 -1 N VAL D 31 O GLY D 19 SHEET 3 B 8 ALA D 38 GLU D 44 -1 N GLU D 44 O THR D 28 SHEET 4 B 8 ARG D 53 TYR D 60 -1 N GLY D 58 O LEU D 39 SHEET 5 B 8 THR D 71 ALA D 78 -1 N THR D 76 O THR D 57 SHEET 6 B 8 SER D 88 VAL D 97 -1 N TYR D 96 O THR D 71 SHEET 7 B 8 ARG D 103 SER D 112 -1 N THR D 111 O ALA D 89 SHEET 8 B 8 THR D 123 PHE D 130 -1 N PHE D 130 O ILE D 104
SSBOND 1 CYS M 1 CYS M 8 1555 1555 2.03 SSBOND 2 CYS P 1 CYS P 8 1555 1555 2.02
LINK C ACE M 0 N CYS M 1 1555 1555 1.33 LINK C CYS M 8 N NH2 M 9 1555 1555 1.33 LINK C ACE P 0 N CYS P 1 1555 1555 1.32 LINK C CYS P 8 N NH2 P 9 1555 1555 1.33
CRYST1 97.650 107.610 49.460 90.00 90.00 90.00 I 2 2 2 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.010241 0.000000 0.000000 0.00000
SCALE2 0.000000 0.009293 0.000000 0.00000
SCALE3 0.000000 0.000000 0.020218 0.00000
MTRIX1 1 -1.000000 -0.029000 -0.007000 53.55600 1
MTRIX2 1 -0.025000 0.724000 0.689000 0.62800 1
MTRIX3 1 -0.015000 0.689000 -0.725000 0.49100 1