10 20 30 40 50 60 70 80 1SJ8 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL PROTEIN 03-MAR-04 1SJ8
TITLE CRYSTAL STRUCTURE OF TALIN RESIDUES 482-789
CAVEAT 1SJ8 CHIRALITY ERRORS AT THE CA CENTER OF LEU 698
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TALIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 482-789; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: TLN1, TLN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B
KEYWDS STRUCTURAL PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR E.PAPAGRIGORIOU,A.R.GINGRAS,I.L.BARSUKOV,D.R.CRITCHLEY, AUTHOR 2 J.EMSLEY
REVDAT 2 24-FEB-09 1SJ8 1 VERSN REVDAT 1 24-AUG-04 1SJ8 0
JRNL AUTH E.PAPAGRIGORIOU,A.R.GINGRAS,I.L.BARSUKOV,N.BATE, JRNL AUTH 2 I.J.FILLINGHAM,B.PATEL,R.FRANK,W.H.ZIEGLER, JRNL AUTH 3 G.C.ROBERTS,D.R.CRITCHLEY,J.EMSLEY JRNL TITL ACTIVATION OF A VINCULIN-BINDING SITE IN THE TALIN JRNL TITL 2 ROD INVOLVES REARRANGEMENT OF A FIVE-HELIX BUNDLE JRNL REF EMBO J. V. 23 2942 2004 JRNL REFN ISSN 0261-4189 JRNL PMID 15272303 JRNL DOI 10.1038/SJ.EMBOJ.7600285
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 11142 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.260 REMARK 3 R VALUE (WORKING SET) : 0.258 REMARK 3 FREE R VALUE : 0.297 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 577 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 810 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3160 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.4940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2113 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 86 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.38000 REMARK 3 B22 (A**2) : 0.38000 REMARK 3 B33 (A**2) : -0.57000 REMARK 3 B12 (A**2) : 0.19000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.669 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.350 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.308 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.370 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2124 ; 0.031 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2892 ; 2.300 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 295 ; 3.419 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 356 ;22.122 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 363 ; 0.136 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1566 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1293 ; 0.347 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 117 ; 0.195 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 20 ; 0.401 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.282 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1469 ; 0.811 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2334 ; 1.383 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 655 ; 2.565 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 558 ; 3.979 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1SJ8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-04. REMARK 100 THE RCSB ID CODE IS RCSB021753.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : 0.9 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11776 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : 0.08300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.2300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.43200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1SJ7 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE, 20% PEG 6000, REMARK 280 0.1M MGCL2, PH 5.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 295K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 52.90500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 30.54472 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 57.93067 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 52.90500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 30.54472 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 57.93067 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 52.90500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 30.54472 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 57.93067 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 52.90500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 30.54472 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 57.93067 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 52.90500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 30.54472 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 57.93067 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 52.90500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 30.54472 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 57.93067 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 61.08943 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 115.86133 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 61.08943 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 115.86133 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 61.08943 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 115.86133 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 61.08943 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 115.86133 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 61.08943 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 115.86133 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 61.08943 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 115.86133 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 482 REMARK 465 GLY A 483 REMARK 465 HIS A 484 REMARK 465 MET A 485 REMARK 465 GLN A 783 REMARK 465 HIS A 784 REMARK 465 VAL A 785 REMARK 465 LYS A 786 REMARK 465 ALA A 787 REMARK 465 HIS A 788 REMARK 465 ALA A 789
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 726 N SER A 728 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ILE A 550 C ILE A 550 O -0.122 REMARK 500 VAL A 573 CA VAL A 573 CB 0.134 REMARK 500 ALA A 618 CA ALA A 618 CB -0.127 REMARK 500 GLU A 621 CD GLU A 621 OE2 0.074 REMARK 500 SER A 714 CB SER A 714 OG -0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 514 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 ASP A 515 CB - CG - OD2 ANGL. DEV. = 8.3 DEGREES REMARK 500 ASP A 537 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 564 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP A 569 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 LEU A 608 CB - CG - CD1 ANGL. DEV. = -10.6 DEGREES REMARK 500 SER A 658 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 ASP A 659 CB - CA - C ANGL. DEV. = -17.2 DEGREES REMARK 500 THR A 660 C - N - CA ANGL. DEV. = -17.4 DEGREES REMARK 500 GLN A 691 C - N - CA ANGL. DEV. = -15.0 DEGREES REMARK 500 THR A 693 CA - C - N ANGL. DEV. = -14.6 DEGREES REMARK 500 GLY A 697 N - CA - C ANGL. DEV. = -15.5 DEGREES REMARK 500 LEU A 698 CB - CA - C ANGL. DEV. = 17.0 DEGREES REMARK 500 LEU A 698 C - N - CA ANGL. DEV. = -24.8 DEGREES REMARK 500 GLN A 699 N - CA - C ANGL. DEV. = 19.0 DEGREES REMARK 500 LEU A 698 CA - C - N ANGL. DEV. = 18.4 DEGREES REMARK 500 LEU A 698 O - C - N ANGL. DEV. = -16.8 DEGREES REMARK 500 ASP A 760 CB - CG - OD2 ANGL. DEV. = 7.3 DEGREES REMARK 500 GLU A 780 CB - CA - C ANGL. DEV. = 12.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 511 44.71 -80.70 REMARK 500 THR A 512 -15.51 -146.61 REMARK 500 PRO A 521 127.38 -38.09 REMARK 500 LEU A 522 -111.68 -104.37 REMARK 500 ASP A 525 137.93 -39.15 REMARK 500 ALA A 526 -98.61 -28.72 REMARK 500 LYS A 529 -37.16 -33.46 REMARK 500 ASN A 534 -72.91 -58.51 REMARK 500 PRO A 565 94.06 -27.66 REMARK 500 ALA A 566 -24.11 138.12 REMARK 500 ASP A 600 -80.75 -97.71 REMARK 500 PRO A 607 -8.96 -57.28 REMARK 500 ALA A 629 35.41 -99.92 REMARK 500 GLU A 632 -70.07 -132.89 REMARK 500 PRO A 633 -153.97 -91.11 REMARK 500 GLN A 654 -74.15 -59.88 REMARK 500 ILE A 655 9.83 -60.88 REMARK 500 SER A 658 55.28 -67.98 REMARK 500 ASP A 659 -4.32 -37.29 REMARK 500 ASP A 661 97.57 7.27 REMARK 500 PRO A 662 166.57 -48.45 REMARK 500 HIS A 663 -27.62 63.43 REMARK 500 GLN A 691 31.42 -88.40 REMARK 500 GLU A 694 113.25 -28.53 REMARK 500 ASP A 695 80.90 6.37 REMARK 500 SER A 696 -151.44 60.67 REMARK 500 GLN A 699 -51.02 7.43 REMARK 500 PRO A 725 -4.18 -58.41 REMARK 500 THR A 726 -89.19 -123.11 REMARK 500 ILE A 727 -12.57 47.97 REMARK 500 THR A 758 170.30 -30.91 REMARK 500 GLU A 759 125.62 76.58 REMARK 500 ASP A 760 -173.90 141.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 698 GLN A 699 50.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LEU A 698 -17.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LEU A 698 179.4 ALPHA-CARBON REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SJ7 RELATED DB: PDB
DBREF 1SJ8 A 482 789 UNP P26039 TLN1_MOUSE 482 789
SEQRES 1 A 308 ARG GLY HIS MET PRO PRO LEU THR SER ALA GLN GLN ALA SEQRES 2 A 308 LEU THR GLY THR ILE ASN SER SER MET GLN ALA VAL GLN SEQRES 3 A 308 ALA ALA GLN ALA THR LEU ASP ASP PHE GLU THR LEU PRO SEQRES 4 A 308 PRO LEU GLY GLN ASP ALA ALA SER LYS ALA TRP ARG LYS SEQRES 5 A 308 ASN LYS MET ASP GLU SER LYS HIS GLU ILE HIS SER GLN SEQRES 6 A 308 VAL ASP ALA ILE THR ALA GLY THR ALA SER VAL VAL ASN SEQRES 7 A 308 LEU THR ALA GLY ASP PRO ALA GLU THR ASP TYR THR ALA SEQRES 8 A 308 VAL GLY CYS ALA VAL THR THR ILE SER SER ASN LEU THR SEQRES 9 A 308 GLU MET SER ARG GLY VAL LYS LEU LEU ALA ALA LEU LEU SEQRES 10 A 308 GLU ASP GLU GLY GLY ASN GLY ARG PRO LEU LEU GLN ALA SEQRES 11 A 308 ALA LYS GLY LEU ALA GLY ALA VAL SER GLU LEU LEU ARG SEQRES 12 A 308 SER ALA GLN PRO ALA SER ALA GLU PRO ARG GLN ASN LEU SEQRES 13 A 308 LEU GLN ALA ALA GLY ASN VAL GLY GLN ALA SER GLY GLU SEQRES 14 A 308 LEU LEU GLN GLN ILE GLY GLU SER ASP THR ASP PRO HIS SEQRES 15 A 308 PHE GLN ASP VAL LEU MET GLN LEU ALA ASN ALA VAL ALA SEQRES 16 A 308 SER ALA ALA ALA ALA LEU VAL LEU LYS ALA LYS SER VAL SEQRES 17 A 308 ALA GLN ARG THR GLU ASP SER GLY LEU GLN THR GLN VAL SEQRES 18 A 308 ILE ALA ALA ALA THR GLN CYS ALA LEU SER THR SER GLN SEQRES 19 A 308 LEU VAL ALA CYS THR LYS VAL VAL ALA PRO THR ILE SER SEQRES 20 A 308 SER PRO VAL CYS GLN GLU GLN LEU VAL GLU ALA GLY ARG SEQRES 21 A 308 LEU VAL ALA LYS ALA VAL GLU GLY CYS VAL SER ALA SER SEQRES 22 A 308 GLN ALA ALA THR GLU ASP GLY GLN LEU LEU ARG GLY VAL SEQRES 23 A 308 GLY ALA ALA ALA THR ALA VAL THR GLN ALA LEU ASN GLU SEQRES 24 A 308 LEU LEU GLN HIS VAL LYS ALA HIS ALA
FORMUL 2 HOH *86(H2 O)
HELIX 1 1 THR A 489 ALA A 511 1 23 HELIX 2 2 ASP A 525 ALA A 530 1 6 HELIX 3 3 ALA A 530 THR A 561 1 32 HELIX 4 4 ASP A 569 ASP A 600 1 32 HELIX 5 5 GLY A 605 GLN A 627 1 23 HELIX 6 6 ARG A 634 ILE A 655 1 22 HELIX 7 7 HIS A 663 GLN A 691 1 29 HELIX 8 8 GLN A 699 ALA A 724 1 26 HELIX 9 9 SER A 729 ALA A 757 1 29 HELIX 10 10 GLY A 761 LEU A 781 1 21
CISPEP 1 GLU A 632 PRO A 633 0 -0.06
CRYST1 105.810 105.810 173.792 90.00 90.00 120.00 H 3 2 18
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009451 0.005456 0.000000 0.00000
SCALE2 0.000000 0.010913 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005754 0.00000