10 20 30 40 50 60 70 80 1SAT - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE (SERINE PROTEASE) 04-JUL-94 1SAT
TITLE CRYSTAL STRUCTURE OF THE 50 KDA METALLO PROTEASE FROM S. TITLE 2 MARCESCENS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERRATIA PROTEASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SERRALYSIN, MAJOR METALLO PROTEASE FROM SERRATIA COMPND 5 MARCESCENS
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SERRATIA MARCESCENS; SOURCE 3 ORGANISM_TAXID: 615
KEYWDS PARALLEL BETA HELIX, PARALLEL BETA ROLL, HYDROLASE (SERINE KEYWDS 2 PROTEASE)
EXPDTA X-RAY DIFFRACTION
AUTHOR U.BAUMANN
REVDAT 3 24-FEB-09 1SAT 1 VERSN REVDAT 2 01-APR-03 1SAT 1 JRNL REVDAT 1 31-JUL-95 1SAT 0
JRNL AUTH U.BAUMANN JRNL TITL CRYSTAL STRUCTURE OF THE 50 KDA METALLO PROTEASE JRNL TITL 2 FROM SERRATIA MARCESCENS. JRNL REF J.MOL.BIOL. V. 242 244 1994 JRNL REFN ISSN 0022-2836 JRNL PMID 8089845 JRNL DOI 10.1006/JMBI.1994.1576
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH U.BAUMANN,S.WU,K.M.FLAHERTY,D.B.MCKAY REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF THE ALKALINE REMARK 1 TITL 2 PROTEASE FROM PS. AERUGINOSA: A TWO-DOMAIN PROTEIN REMARK 1 TITL 3 WITH A CALCIUM BINDING PARALLEL BETA ROLL MOTIF REMARK 1 REF EMBO J. V. 12 3357 1993 REMARK 1 REFN ISSN 0261-4189
REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 84.4 REMARK 3 NUMBER OF REFLECTIONS : 60167 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3539 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 194 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.45 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.46 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.18 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.400 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.200 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.400 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.700 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1SAT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81141 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 75.50000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.30000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.60000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 21.30000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 75.50000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.60000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 111 CG CD OE1 NE2 REMARK 470 LYS A 112 CG CD CE NZ
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 187 0.01 -66.04 REMARK 500 TYR A 190 128.41 -172.99 REMARK 500 ASP A 225 105.10 -160.73 REMARK 500 ASN A 343 -166.44 -126.34 REMARK 500 SER A 379 10.61 -140.40 REMARK 500 ALA A 388 46.95 -154.22 REMARK 500 ASP A 394 40.79 -152.17 REMARK 500 ILE A 399 -57.12 -120.52 REMARK 500 PHE A 416 -70.32 -62.18 REMARK 500 SER A 424 5.13 -150.96 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 472 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 186 NE2 REMARK 620 2 HIS A 176 NE2 114.7 REMARK 620 3 HIS A 180 NE2 102.4 101.6 REMARK 620 4 HOH A 510 O 127.3 107.4 98.5 REMARK 620 5 TYR A 216 OH 89.2 76.1 167.9 71.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 473 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 285 OD2 REMARK 620 2 ARG A 253 O 89.6 REMARK 620 3 GLY A 255 O 156.6 94.8 REMARK 620 4 ASP A 285 OD1 50.8 80.4 152.6 REMARK 620 5 GLY A 287 O 121.7 84.8 81.6 71.1 REMARK 620 6 ASP A 290 OD1 84.0 172.5 89.7 98.4 101.9 REMARK 620 7 THR A 257 OG1 76.3 91.4 80.7 126.2 161.5 83.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 474 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 327 O REMARK 620 2 GLU A 329 OE1 81.2 REMARK 620 3 GLU A 329 OE2 82.4 49.5 REMARK 620 4 HOH A 543 O 99.9 126.4 77.3 REMARK 620 5 GLY A 288 O 163.9 82.7 87.7 90.2 REMARK 620 6 ASP A 290 OD2 95.8 84.1 133.4 147.3 81.9 REMARK 620 7 HOH A 541 O 83.7 152.2 150.0 79.1 110.7 74.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 475 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 356 OD1 REMARK 620 2 ASP A 356 OD2 45.5 REMARK 620 3 ASP A 338 OD2 82.2 114.7 REMARK 620 4 GLY A 351 O 94.9 64.4 91.0 REMARK 620 5 GLY A 334 O 168.3 144.4 86.5 88.2 REMARK 620 6 GLY A 336 O 78.9 111.6 85.9 173.3 97.5 REMARK 620 7 ALA A 353 O 106.6 78.2 166.6 98.1 84.1 86.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 476 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 345 O REMARK 620 2 ASN A 343 O 89.3 REMARK 620 3 ASN A 347 OD1 83.1 85.0 REMARK 620 4 GLY A 362 O 86.9 91.6 169.5 REMARK 620 5 ASP A 365 OD2 121.1 145.6 112.2 75.9 REMARK 620 6 ASP A 365 OD1 82.3 167.1 84.3 97.7 46.5 REMARK 620 7 GLY A 360 O 170.1 85.2 88.3 101.4 66.7 101.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 477 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 356 OD2 REMARK 620 2 ASP A 374 OD1 77.7 REMARK 620 3 GLY A 352 O 80.5 153.9 REMARK 620 4 GLY A 369 O 96.1 88.9 79.1 REMARK 620 5 ALA A 371 O 152.6 118.3 87.5 105.9 REMARK 620 6 ASP A 374 OD2 121.9 48.4 140.5 67.4 82.5 REMARK 620 7 GLY A 354 O 80.0 82.0 108.3 170.7 80.5 107.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 478 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 372 O REMARK 620 2 ASP A 374 OD2 84.0 REMARK 620 3 ASP A 400 OD1 82.3 92.4 REMARK 620 4 ASP A 400 OD2 111.5 123.5 41.9 REMARK 620 5 HOH A 566 O 159.6 91.1 78.2 55.5 REMARK 620 6 HOH A 629 O 90.8 174.2 89.6 61.0 94.7 REMARK 620 7 GLY A 370 O 111.1 81.4 164.3 132.2 87.5 98.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 479 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 362 O REMARK 620 2 GLY A 363 O 67.0 REMARK 620 3 ASP A 365 OD2 67.3 99.3 REMARK 620 4 ASP A 383 O 128.2 96.9 161.4 REMARK 620 5 ASP A 390 OD1 137.6 85.3 87.6 84.7 REMARK 620 6 HOH A 561 O 117.5 171.5 76.9 85.8 86.9 REMARK 620 7 GLY A 361 O 62.2 122.5 84.8 94.1 152.0 65.2 REMARK 620 N 1 2 3 4 5 6
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 472 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 473 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 474 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 475 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 476 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 477 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 478 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 479
DBREF 1SAT A 1 471 UNP P23694 PRZN_SERMA 17 487
SEQADV 1SAT ASP A 196 UNP P23694 ASN 212 CONFLICT SEQADV 1SAT ALA A 200 UNP P23694 ASN 216 CONFLICT SEQADV 1SAT LEU A 250 UNP P23694 PRO 266 CONFLICT SEQADV 1SAT ASP A 408 UNP P23694 ASN 424 CONFLICT SEQADV 1SAT SER A 415 UNP P23694 ASP 431 CONFLICT SEQADV 1SAT ALA A 451 UNP P23694 GLN 467 CONFLICT
SEQRES 1 A 471 ALA ALA THR THR GLY TYR ASP ALA VAL ASP ASP LEU LEU SEQRES 2 A 471 HIS TYR HIS GLU ARG GLY ASN GLY ILE GLN ILE ASN GLY SEQRES 3 A 471 LYS ASP SER PHE SER ASN GLU GLN ALA GLY LEU PHE ILE SEQRES 4 A 471 THR ARG GLU ASN GLN THR TRP ASN GLY TYR LYS VAL PHE SEQRES 5 A 471 GLY GLN PRO VAL LYS LEU THR PHE SER PHE PRO ASP TYR SEQRES 6 A 471 LYS PHE SER SER THR ASN VAL ALA GLY ASP THR GLY LEU SEQRES 7 A 471 SER LYS PHE SER ALA GLU GLN GLN GLN GLN ALA LYS LEU SEQRES 8 A 471 SER LEU GLN SER TRP ALA ASP VAL ALA ASN ILE THR PHE SEQRES 9 A 471 THR GLU VAL ALA ALA GLY GLN LYS ALA ASN ILE THR PHE SEQRES 10 A 471 GLY ASN TYR SER GLN ASP ARG PRO GLY HIS TYR ASP TYR SEQRES 11 A 471 GLY THR GLN ALA TYR ALA PHE LEU PRO ASN THR ILE TRP SEQRES 12 A 471 GLN GLY GLN ASP LEU GLY GLY GLN THR TRP TYR ASN VAL SEQRES 13 A 471 ASN GLN SER ASN VAL LYS HIS PRO ALA THR GLU ASP TYR SEQRES 14 A 471 GLY ARG GLN THR PHE THR HIS GLU ILE GLY HIS ALA LEU SEQRES 15 A 471 GLY LEU SER HIS PRO GLY ASP TYR ASN ALA GLY GLU GLY SEQRES 16 A 471 ASP PRO THR TYR ALA ASP VAL THR TYR ALA GLU ASP THR SEQRES 17 A 471 ARG GLN PHE SER LEU MET SER TYR TRP SER GLU THR ASN SEQRES 18 A 471 THR GLY GLY ASP ASN GLY GLY HIS TYR ALA ALA ALA PRO SEQRES 19 A 471 LEU LEU ASP ASP ILE ALA ALA ILE GLN HIS LEU TYR GLY SEQRES 20 A 471 ALA ASN LEU SER THR ARG THR GLY ASP THR VAL TYR GLY SEQRES 21 A 471 PHE ASN SER ASN THR GLY ARG ASP PHE LEU SER THR THR SEQRES 22 A 471 SER ASN SER GLN LYS VAL ILE PHE ALA ALA TRP ASP ALA SEQRES 23 A 471 GLY GLY ASN ASP THR PHE ASP PHE SER GLY TYR THR ALA SEQRES 24 A 471 ASN GLN ARG ILE ASN LEU ASN GLU LYS SER PHE SER ASP SEQRES 25 A 471 VAL GLY GLY LEU LYS GLY ASN VAL SER ILE ALA ALA GLY SEQRES 26 A 471 VAL THR ILE GLU ASN ALA ILE GLY GLY SER GLY ASN ASP SEQRES 27 A 471 VAL ILE VAL GLY ASN ALA ALA ASN ASN VAL LEU LYS GLY SEQRES 28 A 471 GLY ALA GLY ASN ASP VAL LEU PHE GLY GLY GLY GLY ALA SEQRES 29 A 471 ASP GLU LEU TRP GLY GLY ALA GLY LYS ASP ILE PHE VAL SEQRES 30 A 471 PHE SER ALA ALA SER ASP SER ALA PRO GLY ALA SER ASP SEQRES 31 A 471 TRP ILE ARG ASP PHE GLN LYS GLY ILE ASP LYS ILE ASP SEQRES 32 A 471 LEU SER PHE PHE ASP LYS GLU ALA ASN SER SER SER PHE SEQRES 33 A 471 ILE HIS PHE VAL ASP HIS PHE SER GLY THR ALA GLY GLU SEQRES 34 A 471 ALA LEU LEU SER TYR ASN ALA SER SER ASN VAL THR ASP SEQRES 35 A 471 LEU SER VAL ASN ILE GLY GLY HIS ALA ALA PRO ASP PHE SEQRES 36 A 471 LEU VAL LYS ILE VAL GLY GLN VAL ASP VAL ALA THR ASP SEQRES 37 A 471 PHE ILE VAL
HET ZN A 472 1 HET CA A 473 1 HET CA A 474 1 HET CA A 475 1 HET CA A 476 1 HET CA A 477 1 HET CA A 478 1 HET CA A 479 1
HETNAM ZN ZINC ION HETNAM CA CALCIUM ION
FORMUL 2 ZN ZN 2+ FORMUL 3 CA 7(CA 2+) FORMUL 10 HOH *194(H2 O)
HELIX 1 1 GLY A 5 LEU A 13 1 9 HELIX 2 2 ASN A 32 ILE A 39 1 8 HELIX 3 3 ALA A 83 VAL A 99 1 17 HELIX 4 4 SER A 159 LYS A 162 1 4 HELIX 5 5 ASP A 168 LEU A 182 1 15 HELIX 6 6 TYR A 199 ASP A 201 5 3 HELIX 7 7 GLU A 219 THR A 222 5 4 HELIX 8 8 LEU A 236 TYR A 246 1 11 HELIX 9 9 ASP A 268 LEU A 270 5 3 HELIX 10 10 ALA A 381 SER A 384 5 4 HELIX 11 11 SER A 405 ALA A 411 1 7
SHEET 1 A 2 VAL A 56 PHE A 60 0 SHEET 2 A 2 ILE A 102 GLU A 106 1 N THR A 103 O VAL A 56 SHEET 1 B 3 THR A 116 TYR A 120 0 SHEET 2 B 3 GLN A 151 ASN A 155 1 N THR A 152 O THR A 116 SHEET 3 B 3 ALA A 134 ALA A 136 -1 N TYR A 135 O TRP A 153 SHEET 1 C 3 VAL A 258 GLY A 260 0 SHEET 2 C 3 THR A 291 ASP A 293 1 N THR A 291 O TYR A 259 SHEET 3 C 3 ASN A 330 ILE A 332 1 N ASN A 330 O PHE A 292 SHEET 1 D 2 PHE A 281 ALA A 283 0 SHEET 2 D 2 VAL A 320 ILE A 322 1 N SER A 321 O PHE A 281 SHEET 1 E 5 ARG A 302 ASN A 304 0 SHEET 2 E 5 VAL A 339 VAL A 341 1 N VAL A 339 O ILE A 303 SHEET 3 E 5 VAL A 357 PHE A 359 1 N VAL A 357 O ILE A 340 SHEET 4 E 5 ILE A 375 VAL A 377 1 N ILE A 375 O LEU A 358 SHEET 5 E 5 LYS A 401 ASP A 403 1 N LYS A 401 O PHE A 376 SHEET 1 F 2 VAL A 348 LYS A 350 0 SHEET 2 F 2 GLU A 366 TRP A 368 1 N GLU A 366 O LEU A 349 SHEET 1 G 4 ASP A 390 ILE A 392 0 SHEET 2 G 4 PHE A 455 VAL A 460 1 N LYS A 458 O ASP A 390 SHEET 3 G 4 VAL A 440 VAL A 445 -1 N VAL A 445 O PHE A 455 SHEET 4 G 4 ALA A 430 ASN A 435 -1 N ASN A 435 O VAL A 440
LINK ZN ZN A 472 NE2 HIS A 186 1555 1555 1.99 LINK ZN ZN A 472 NE2 HIS A 176 1555 1555 2.08 LINK ZN ZN A 472 NE2 HIS A 180 1555 1555 2.13 LINK ZN ZN A 472 O HOH A 510 1555 1555 1.84 LINK ZN ZN A 472 OH TYR A 216 1555 1555 2.77 LINK CA CA A 473 OD2 ASP A 285 1555 1555 2.57 LINK CA CA A 473 O ARG A 253 1555 1555 2.30 LINK CA CA A 473 O GLY A 255 1555 1555 2.36 LINK CA CA A 473 OD1 ASP A 285 1555 1555 2.55 LINK CA CA A 473 O GLY A 287 1555 1555 2.31 LINK CA CA A 473 OD1 ASP A 290 1555 1555 2.41 LINK CA CA A 473 OG1 THR A 257 1555 1555 2.44 LINK CA CA A 474 O THR A 327 1555 1555 2.36 LINK CA CA A 474 OE1 GLU A 329 1555 1555 2.62 LINK CA CA A 474 OE2 GLU A 329 1555 1555 2.58 LINK CA CA A 474 O HOH A 543 1555 1555 2.45 LINK CA CA A 474 O GLY A 288 1555 1555 2.38 LINK CA CA A 474 OD2 ASP A 290 1555 1555 2.44 LINK CA CA A 474 O HOH A 541 1555 1555 2.38 LINK CA CA A 475 OD1 ASP A 356 1555 1555 2.47 LINK CA CA A 475 OD2 ASP A 356 1555 1555 3.01 LINK CA CA A 475 OD2 ASP A 338 1555 1555 2.50 LINK CA CA A 475 O GLY A 351 1555 1555 2.32 LINK CA CA A 475 O GLY A 334 1555 1555 2.33 LINK CA CA A 475 O GLY A 336 1555 1555 2.38 LINK CA CA A 475 O ALA A 353 1555 1555 2.38 LINK CA CA A 476 O ALA A 345 1555 1555 2.37 LINK CA CA A 476 O ASN A 343 1555 1555 2.31 LINK CA CA A 476 OD1 ASN A 347 1555 1555 2.39 LINK CA CA A 476 O GLY A 362 1555 1555 2.33 LINK CA CA A 476 OD2 ASP A 365 1555 1555 2.90 LINK CA CA A 476 OD1 ASP A 365 1555 1555 2.49 LINK CA CA A 476 O GLY A 360 1555 1555 2.40 LINK CA CA A 477 OD2 ASP A 356 1555 1555 2.46 LINK CA CA A 477 OD1 ASP A 374 1555 1555 2.48 LINK CA CA A 477 O GLY A 352 1555 1555 2.32 LINK CA CA A 477 O GLY A 369 1555 1555 2.40 LINK CA CA A 477 O ALA A 371 1555 1555 2.27 LINK CA CA A 477 OD2 ASP A 374 1555 1555 2.77 LINK CA CA A 477 O GLY A 354 1555 1555 2.43 LINK CA CA A 478 O GLY A 372 1555 1555 2.46 LINK CA CA A 478 OD2 ASP A 374 1555 1555 2.44 LINK CA CA A 478 OD1 ASP A 400 1555 1555 2.55 LINK CA CA A 478 OD2 ASP A 400 1555 1555 3.31 LINK CA CA A 478 O HOH A 566 1555 1555 2.66 LINK CA CA A 478 O HOH A 629 1555 1555 2.29 LINK CA CA A 478 O GLY A 370 1555 1555 2.47 LINK CA CA A 479 O GLY A 362 1555 1555 3.30 LINK CA CA A 479 O GLY A 363 1555 1555 2.35 LINK CA CA A 479 OD2 ASP A 365 1555 1555 2.40 LINK CA CA A 479 O ASP A 383 1555 1555 2.21 LINK CA CA A 479 OD1 ASP A 390 1555 1555 2.54 LINK CA CA A 479 O HOH A 561 1555 1555 2.81 LINK CA CA A 479 O GLY A 361 1555 1555 2.40
SITE 1 AC1 5 HIS A 176 HIS A 180 HIS A 186 TYR A 216 SITE 2 AC1 5 HOH A 510 SITE 1 AC2 6 ARG A 253 GLY A 255 THR A 257 ASP A 285 SITE 2 AC2 6 GLY A 287 ASP A 290 SITE 1 AC3 6 GLY A 288 ASP A 290 THR A 327 GLU A 329 SITE 2 AC3 6 HOH A 541 HOH A 543 SITE 1 AC4 6 GLY A 334 GLY A 336 ASP A 338 GLY A 351 SITE 2 AC4 6 ALA A 353 ASP A 356 SITE 1 AC5 6 ASN A 343 ALA A 345 ASN A 347 GLY A 360 SITE 2 AC5 6 GLY A 362 ASP A 365 SITE 1 AC6 6 GLY A 352 GLY A 354 ASP A 356 GLY A 369 SITE 2 AC6 6 ALA A 371 ASP A 374 SITE 1 AC7 6 GLY A 370 GLY A 372 ASP A 374 ASP A 400 SITE 2 AC7 6 HOH A 566 HOH A 629 SITE 1 AC8 7 GLY A 361 GLY A 362 GLY A 363 ASP A 365 SITE 2 AC8 7 ASP A 383 ASP A 390 HOH A 561
CRYST1 151.000 109.200 42.600 90.00 90.00 90.00 P 21 21 21 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.006623 0.000000 0.000000 0.00000
SCALE2 0.000000 0.009158 0.000000 0.00000
SCALE3 0.000000 0.000000 0.023474 0.00000