1RVS - Header Asymmetric Unit

HEADER DE NOVO PROTEIN 14-DEC-03 1RVS

TITLE STRUCTURE OF TRANSTHYRETIN IN AMYLOID FIBRILS DETERMINED BY TITLE 2 SOLID-STATE MAGIC ANGLE SPINNING NMR

COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSTHYRETIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-11; COMPND 5 SYNONYM: PREALBUMIN, TBPA; COMPND 6 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE SEQUENCE OF THE PEPTIDE IS NATURALLY SOURCE 4 FOUND IN RATTUS NORVEGICUS (RAT). IT WAS SYNTHESIZED BY SOURCE 5 STANDARD SOLID-PHASE METHODS AND HPLC PURIFICATION.

KEYWDS TRANSTHYRETIN, TTR, AMYLOID, FIBRIL, DE NOVO PROTEIN

EXPDTA SOLID-STATE NMR

NUMMDL 20

AUTHOR C.P.JARONIEC,C.E.MACPHEE,V.S.BAJAJ,M.T.MCMAHON,C.M.DOBSON, AUTHOR 2 R.G.GRIFFIN

REVDAT 2 24-FEB-09 1RVS 1 VERSN REVDAT 1 20-JAN-04 1RVS 0

JRNL AUTH C.P.JARONIEC,C.E.MACPHEE,V.S.BAJAJ,M.T.MCMAHON, JRNL AUTH 2 C.M.DOBSON,R.G.GRIFFIN JRNL TITL HIGH-RESOLUTION MOLECULAR STRUCTURE OF A PEPTIDE JRNL TITL 2 IN AN AMYLOID FIBRIL DETERMINED BY MAGIC ANGLE JRNL TITL 3 SPINNING NMR SPECTROSCOPY JRNL REF PROC.NATL.ACAD.SCI.USA V. 101 711 2004 JRNL REFN ISSN 0027-8424 JRNL PMID 14715898 JRNL DOI 10.1073/PNAS.0304849101

REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.P.JARONIEC,C.E.MACPHEE,N.S.ASTROF,C.M.DOBSON, REMARK 1 AUTH 2 R.G.GRIFFIN REMARK 1 TITL MOLECULAR CONFORMATION OF A PEPTIDE FRAGMENT OF REMARK 1 TITL 2 TRANSTHYRETIN IN AN AMYLOID FIBRIL REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 99 16748 2002 REMARK 1 REFN ISSN 0027-8424 REMARK 1 DOI 10.1073/PNAS.252625999

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IN ADDITION TO EXPERIMENTAL NMR REMARK 3 RESTRAINTS, BACKBONE CONFORMATION INDEPENDENT DATABASE-DERIVED REMARK 3 RESTRAINTS (DUNBRACK, R.L. AND KARPLUS, M.J., J.MOL.BIOL. REMARK 3 1993, 203:543-574) WERE USED TO UNIQUELY DEFINE THE SIDE-CHAIN REMARK 3 CONFORMATION OF TYR AND LEU RESIDUES

REMARK 4 REMARK 4 1RVS COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-DEC-03. REMARK 100 THE RCSB ID CODE IS RCSB021071.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 275.15 REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : TRANSTHYRETIN AMYLOID FIBRILS REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D-TEDOR, 2D-FS-REDOR, 3D-N-C REMARK 210 -C-N, 3D-H-N-C-H REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : CAMBRIDGE INSTRUMENTS REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : RNMR REMARK 210 METHOD USED : SIMULATED ANNEALING, REMARK 210 MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL

REMARK 217 REMARK 217 SOLID STATE NMR STUDY REMARK 217 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLID REMARK 217 STATE NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 217 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 217 THESE RECORDS ARE MEANINGLESS.

DBREF 1RVS A 1 11 UNP P02767 TTHY_RAT 125 135

SEQRES 1 A 11 TYR THR ILE ALA ALA LEU LEU SER PRO TYR SER

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000