10 20 30 40 50 60 70 80 1RQT - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RIBOSOME 07-DEC-03 1RQT
TITLE NMR STRUCTURE OF DIMERIC N-TERMINAL DOMAIN OF RIBOSOMAL TITLE 2 PROTEIN L7 FROM E.COLI
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L7/L12; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN; COMPND 5 SYNONYM: L8; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: XL1; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PPR1
KEYWDS PROTEIN L7/L12,RIBOSOME, NMR
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR E.V.BOCHAROV,A.G.SOBOL,K.V.PAVLOV,D.M.KORZHNEV,V.A.JARAVINE, AUTHOR 2 A.T.GUDKOV,A.S.ARSENIEV
REVDAT 3 24-FEB-09 1RQT 1 VERSN REVDAT 2 08-MAR-05 1RQT 1 SOURCE JRNL REVDAT 1 02-MAR-04 1RQT 0
JRNL AUTH E.V.BOCHAROV,A.G.SOBOL,K.V.PAVLOV,D.M.KORZHNEV, JRNL AUTH 2 V.A.JARAVINE,A.T.GUDKOV,A.S.ARSENIEV JRNL TITL FROM STRUCTURE AND DYNAMICS OF PROTEIN L7/L12 TO JRNL TITL 2 MOLECULAR SWITCHING IN RIBOSOME. JRNL REF J.BIOL.CHEM. V. 279 17697 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 14960595 JRNL DOI 10.1074/JBC.M313384200
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : FANTOM 4 REMARK 3 AUTHORS : SCHAUMANN, T REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1RQT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-DEC-03. REMARK 100 THE RCSB ID CODE IS RCSB020967.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.9 REMARK 210 IONIC STRENGTH : 0.15 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM L7 DIMER U-15N; 50MM REMARK 210 PHOSPHATE BUFFER; 90% H2O, 10% REMARK 210 D2O; 30 C; 1MM L7 DIMER U-15N; REMARK 210 50MM PHOSPHATE BUFFER; 99.9% REMARK 210 D2O; 30 C REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 2D REMARK 210 NOESY, 3D_15N-HNHB, 15N-HMQCJ REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITY REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 6.3B, XEASY 1.2.11, REMARK 210 CYANA 1.01 REMARK 210 METHOD USED : SIMULATED ANNEALING COMBINED REMARK 210 WITH MOLECULAR DYNAMICS IN REMARK 210 TORSION ANGLE SPACE REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS,TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 12 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 2 59.88 -104.50 REMARK 500 1 SER A 33 72.31 -116.30 REMARK 500 1 ALA A 35 74.94 -165.57 REMARK 500 1 ILE B 2 59.30 -99.05 REMARK 500 1 VAL B 32 48.78 -92.25 REMARK 500 1 ALA B 34 63.43 -117.65 REMARK 500 1 ALA B 35 81.01 51.59 REMARK 500 1 ALA B 36 69.62 60.15 REMARK 500 2 ILE A 2 59.01 -101.88 REMARK 500 2 ALA A 34 94.52 178.32 REMARK 500 2 ALA A 35 75.44 -164.87 REMARK 500 2 ILE B 2 59.01 -101.55 REMARK 500 2 VAL B 32 60.48 -114.89 REMARK 500 2 ALA B 34 93.10 62.06 REMARK 500 2 ALA B 35 78.56 -168.70 REMARK 500 3 ILE A 2 60.59 -104.52 REMARK 500 3 ALA A 34 94.99 -176.20 REMARK 500 3 ALA A 35 93.89 -166.23 REMARK 500 3 ALA A 36 151.44 -42.87 REMARK 500 3 ILE B 2 58.52 -99.94 REMARK 500 3 VAL B 32 54.92 -100.74 REMARK 500 3 ALA B 34 84.13 51.78 REMARK 500 3 ALA B 35 103.60 -171.02 REMARK 500 4 ILE A 2 59.70 -102.69 REMARK 500 4 ALA A 34 98.36 70.94 REMARK 500 4 ALA A 35 85.17 -158.96 REMARK 500 4 ALA A 36 160.06 -44.64 REMARK 500 4 ILE B 2 59.30 -101.75 REMARK 500 4 VAL B 32 55.89 -108.33 REMARK 500 4 ALA B 34 72.73 -173.48 REMARK 500 4 ALA B 35 71.93 47.26 REMARK 500 5 ILE A 2 58.80 -101.17 REMARK 500 5 ALA A 34 70.82 -175.45 REMARK 500 5 ILE B 2 57.98 -97.64 REMARK 500 5 ALA B 34 59.58 -175.12 REMARK 500 5 ALA B 35 87.93 42.22 REMARK 500 5 ALA B 36 89.76 45.50 REMARK 500 6 ILE A 2 61.45 -107.93 REMARK 500 6 SER A 33 54.42 -101.53 REMARK 500 6 ALA A 34 96.14 177.82 REMARK 500 6 ALA A 35 74.06 -168.49 REMARK 500 6 ILE B 2 61.01 -106.94 REMARK 500 6 VAL B 32 54.07 -107.56 REMARK 500 6 ALA B 34 76.57 61.87 REMARK 500 6 ALA B 35 83.88 44.08 REMARK 500 6 ALA B 36 176.73 60.29 REMARK 500 7 ILE A 2 59.37 -102.28 REMARK 500 7 VAL A 32 61.36 -119.96 REMARK 500 7 ALA A 34 66.85 178.86 REMARK 500 7 ALA A 35 73.97 -166.43 REMARK 500 7 ILE B 2 57.62 -99.18 REMARK 500 7 VAL B 32 52.41 -114.34 REMARK 500 7 ALA B 34 91.21 60.45 REMARK 500 7 ALA B 35 90.98 -168.67 REMARK 500 7 ALA B 36 73.89 52.02 REMARK 500 8 ILE A 2 59.22 -101.53 REMARK 500 8 ALA A 34 92.59 -172.25 REMARK 500 8 ALA A 35 96.90 -162.65 REMARK 500 8 ILE B 2 60.19 -101.92 REMARK 500 8 VAL B 32 65.29 -118.70 REMARK 500 8 ALA B 34 89.49 -164.78 REMARK 500 8 ALA B 36 134.94 64.28 REMARK 500 9 ILE A 2 60.79 -104.48 REMARK 500 9 VAL A 32 57.62 -109.86 REMARK 500 9 ALA A 34 88.94 -161.24 REMARK 500 9 ALA A 35 72.28 43.17 REMARK 500 9 ALA A 36 153.21 -42.75 REMARK 500 9 ILE B 2 59.16 -104.18 REMARK 500 9 ALA B 35 73.03 -176.07 REMARK 500 9 ALA B 36 89.61 -176.63 REMARK 500 10 ILE A 2 59.21 -101.51 REMARK 500 10 ALA A 34 82.19 54.77 REMARK 500 10 ALA A 35 74.32 -170.42 REMARK 500 10 ILE B 2 58.49 -100.29 REMARK 500 10 VAL B 32 54.19 -106.09 REMARK 500 10 SER B 33 73.82 -100.97 REMARK 500 10 ALA B 34 92.35 63.93 REMARK 500 10 ALA B 35 108.52 -163.70 REMARK 500 10 ALA B 36 169.44 62.20 REMARK 500 11 ILE A 2 60.84 -105.67 REMARK 500 11 ALA A 34 91.52 63.49 REMARK 500 11 ALA A 35 98.16 -161.78 REMARK 500 11 ILE B 2 60.79 -102.63 REMARK 500 11 ALA B 34 95.76 -177.96 REMARK 500 12 ILE A 2 61.75 -104.80 REMARK 500 12 VAL A 32 55.39 -108.18 REMARK 500 12 ALA A 34 72.77 -170.95 REMARK 500 12 ALA A 35 81.87 -162.19 REMARK 500 12 ALA A 36 107.12 -42.47 REMARK 500 12 ILE B 2 60.31 -103.30 REMARK 500 12 ALA B 35 95.18 59.86 REMARK 500 13 ILE A 2 59.31 -101.73 REMARK 500 13 ALA A 34 91.52 59.57 REMARK 500 13 ALA A 35 83.27 -158.88 REMARK 500 13 ALA A 36 121.10 -176.25 REMARK 500 13 ILE B 2 59.09 -101.05 REMARK 500 13 SER B 33 74.48 -106.25 REMARK 500 13 ALA B 35 72.77 -177.83 REMARK 500 13 ALA B 36 153.77 61.62 REMARK 500 14 ILE A 2 59.83 -104.23 REMARK 500 14 ALA A 34 58.93 -106.97 REMARK 500 14 ALA A 35 77.40 42.78 REMARK 500 14 ILE B 2 59.19 -103.71 REMARK 500 14 SER B 33 72.12 -113.95 REMARK 500 14 ALA B 34 77.57 -150.93 REMARK 500 14 ALA B 35 96.02 54.65 REMARK 500 15 ILE A 2 59.05 -101.15 REMARK 500 15 SER A 33 77.40 -112.81 REMARK 500 15 ALA A 34 83.11 -174.51 REMARK 500 15 ALA A 35 73.30 41.71 REMARK 500 15 ILE B 2 58.40 -96.28 REMARK 500 15 VAL B 32 61.52 -119.13 REMARK 500 15 SER B 33 72.27 -107.96 REMARK 500 15 ALA B 34 95.42 -176.95 REMARK 500 15 ALA B 35 90.60 -161.63 REMARK 500 15 ALA B 36 131.80 64.53 REMARK 500 16 ILE A 2 59.14 -101.18 REMARK 500 16 ALA A 34 68.15 177.32 REMARK 500 16 ALA A 35 73.39 -170.85 REMARK 500 16 ILE B 2 60.45 -102.03 REMARK 500 16 VAL B 32 58.55 -113.91 REMARK 500 16 SER B 33 66.55 -105.00 REMARK 500 16 ALA B 34 85.79 -178.75 REMARK 500 16 ALA B 35 109.86 -178.03 REMARK 500 16 ALA B 36 105.72 -176.52 REMARK 500 17 ILE A 2 61.14 -106.31 REMARK 500 17 ALA A 34 62.01 -116.19 REMARK 500 17 ALA A 35 76.71 -173.46 REMARK 500 17 ALA A 36 105.89 -40.72 REMARK 500 17 ILE B 2 58.90 -101.46 REMARK 500 17 VAL B 32 56.43 -105.36 REMARK 500 17 ALA B 34 76.24 59.37 REMARK 500 17 ALA B 35 78.15 -172.79 REMARK 500 18 ILE A 2 57.57 -95.15 REMARK 500 18 VAL A 32 61.57 -118.47 REMARK 500 18 SER A 33 56.94 -110.00 REMARK 500 18 ALA A 34 87.25 -173.35 REMARK 500 18 ALA A 35 75.62 -173.78 REMARK 500 18 ILE B 2 59.13 -102.29 REMARK 500 18 ALA B 34 66.68 -174.40 REMARK 500 18 ALA B 35 80.12 -173.75 REMARK 500 19 ILE A 2 60.91 -103.95 REMARK 500 19 ALA A 34 74.42 45.96 REMARK 500 19 ALA A 35 88.60 -164.22 REMARK 500 19 ALA A 36 159.87 61.24 REMARK 500 19 ILE B 2 59.12 -100.08 REMARK 500 19 SER B 33 70.21 -101.53 REMARK 500 19 ALA B 34 84.92 -165.50 REMARK 500 19 ALA B 35 74.52 -166.63 REMARK 500 19 ALA B 36 67.47 -175.51 REMARK 500 20 ILE A 2 60.87 -105.37 REMARK 500 20 VAL A 32 56.77 -112.42 REMARK 500 20 ALA A 34 62.36 -161.39 REMARK 500 20 ALA A 35 74.84 -175.06 REMARK 500 20 ALA A 36 173.67 59.28 REMARK 500 20 ILE B 2 58.01 -96.82 REMARK 500 20 VAL B 32 49.81 -106.75 REMARK 500 20 ALA B 35 89.37 -160.34 REMARK 500 20 ALA B 36 137.03 65.05 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4429 RELATED DB: BMRB REMARK 900 RELATED ID: 1CTF RELATED DB: PDB REMARK 900 RELATED ID: 1DD3 RELATED DB: PDB REMARK 900 RELATED ID: 1DD4 RELATED DB: PDB REMARK 900 RELATED ID: 1RQS RELATED DB: PDB REMARK 900 RELATED ID: 1RQU RELATED DB: PDB REMARK 900 RELATED ID: 1RQV RELATED DB: PDB
DBREF 1RQT A 1 37 UNP P0A7K2 RL7_ECOLI 1 37 DBREF 1RQT B 1 37 UNP P0A7K2 RL7_ECOLI 1 37
SEQRES 1 A 37 SER ILE THR LYS ASP GLN ILE ILE GLU ALA VAL ALA ALA SEQRES 2 A 37 MET SER VAL MET ASP VAL VAL GLU LEU ILE SER ALA MET SEQRES 3 A 37 GLU GLU LYS PHE GLY VAL SER ALA ALA ALA ALA SEQRES 1 B 37 SER ILE THR LYS ASP GLN ILE ILE GLU ALA VAL ALA ALA SEQRES 2 B 37 MET SER VAL MET ASP VAL VAL GLU LEU ILE SER ALA MET SEQRES 3 B 37 GLU GLU LYS PHE GLY VAL SER ALA ALA ALA ALA
HELIX 1 1 THR A 3 ALA A 12 1 10 HELIX 2 2 SER A 15 PHE A 30 1 16 HELIX 3 3 THR B 3 ALA B 12 1 10 HELIX 4 4 SER B 15 PHE B 30 1 16
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000