10 20 30 40 50 60 70 80 1RIM - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER DE NOVO PROTEIN 17-NOV-03 1RIM
TITLE E6-BINDING ZINC FINGER (E6APC2)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: E6APC2 PEPTIDE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED
KEYWDS E6-BINDING DOMAIN, ZINC FINGER, HUMAN PAPILLOMAVIRUS, HPV KEYWDS 2 E6 PROTEIN, DE NOVO PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 29
AUTHOR Y.LIU,Z.LIU,E.ANDROPHY,J.CHEN,J.D.BALEJA
REVDAT 2 24-FEB-09 1RIM 1 VERSN REVDAT 1 03-AUG-04 1RIM 0
JRNL AUTH Y.LIU,Z.LIU,E.ANDROPHY,J.CHEN,J.D.BALEJA JRNL TITL DESIGN AND CHARACTERIZATION OF HELICAL PEPTIDES JRNL TITL 2 THAT INHIBIT THE E6 PROTEIN OF PAPILLOMAVIRUS. JRNL REF BIOCHEMISTRY V. 43 7421 2004 JRNL REFN ISSN 0006-2960 JRNL PMID 15182185 JRNL DOI 10.1021/BI049552A
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER, ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1RIM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-NOV-03. REMARK 100 THE RCSB ID CODE IS RCSB020775.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 10MM DEUTERATED IMIDAZOLE, REMARK 210 4MM ZNSO4, 1MM DEUTERATED DTT REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : ~ 2.0MM PEPTIDE, 10MM REMARK 210 DEUTERATED IMIDAZOLE, 4MM REMARK 210 ZNSO4, 1MM DEUTERATED DTT, AT REMARK 210 PH 6.0, 90% H2O, 10% D2O; ~ REMARK 210 2.0MM PEPTIDE, 10MM DEUTERATED REMARK 210 IMIDAZOLE, 4MM ZNSO4, 1MM REMARK 210 DEUTERATED DTT, AT PH 6.0, REMARK 210 99.96% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D TOCSY, 2D NOESY, DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, CNS 1.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 30 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 29 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 11 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D REMARK 210 HOMONUCLEAR TECHNIQUES
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 2 -43.73 -176.29 REMARK 500 1 ALA A 4 119.09 -167.19 REMARK 500 3 LYS A 2 46.62 -150.18 REMARK 500 3 PHE A 3 117.73 -163.13 REMARK 500 3 GLU A 31 58.67 -105.11 REMARK 500 4 LYS A 2 46.75 -148.13 REMARK 500 5 LYS A 2 50.89 -173.31 REMARK 500 5 PHE A 3 107.71 -161.42 REMARK 500 5 LEU A 27 -86.70 -105.06 REMARK 500 5 LEU A 28 64.00 -105.33 REMARK 500 6 PHE A 12 -100.17 -94.76 REMARK 500 6 MET A 13 -49.60 -160.46 REMARK 500 6 LEU A 27 -72.22 -100.18 REMARK 500 7 LYS A 2 47.53 -162.31 REMARK 500 7 LEU A 27 -76.78 -106.48 REMARK 500 8 LYS A 2 34.81 -154.32 REMARK 500 8 PHE A 12 -92.08 -90.93 REMARK 500 8 MET A 13 -52.68 -161.05 REMARK 500 8 LEU A 27 -62.11 -98.14 REMARK 500 8 GLU A 30 99.97 -165.89 REMARK 500 8 GLU A 31 -60.06 -105.46 REMARK 500 10 LYS A 2 37.93 -154.95 REMARK 500 10 PHE A 3 112.58 -166.86 REMARK 500 10 LEU A 27 -76.94 -85.93 REMARK 500 10 GLU A 30 72.74 -119.90 REMARK 500 11 LYS A 2 54.55 -150.51 REMARK 500 11 SER A 19 -39.86 -39.00 REMARK 500 11 LEU A 27 -72.64 -100.00 REMARK 500 12 LYS A 2 36.98 -153.94 REMARK 500 12 PHE A 12 -101.61 -90.93 REMARK 500 12 MET A 13 -50.01 -160.50 REMARK 500 12 LEU A 27 -63.58 -97.49 REMARK 500 12 LEU A 28 -64.43 -105.17 REMARK 500 13 LYS A 2 47.74 -148.85 REMARK 500 13 LEU A 27 -77.75 -90.19 REMARK 500 14 LEU A 28 -60.01 -102.77 REMARK 500 15 LYS A 2 36.63 -155.50 REMARK 500 15 PHE A 12 -99.50 -97.75 REMARK 500 15 MET A 13 -50.47 -160.85 REMARK 500 15 LEU A 27 -76.04 -95.11 REMARK 500 15 GLU A 30 100.49 -162.90 REMARK 500 16 LYS A 2 47.26 -155.03 REMARK 500 16 PHE A 12 -166.94 -101.43 REMARK 500 17 LEU A 27 -62.20 -90.42 REMARK 500 18 LYS A 2 48.28 -143.22 REMARK 500 18 PHE A 12 -104.03 -92.45 REMARK 500 18 MET A 13 -50.39 -153.75 REMARK 500 18 LEU A 27 -68.26 -107.65 REMARK 500 19 LYS A 2 53.18 -152.31 REMARK 500 19 SER A 19 -39.48 -38.53 REMARK 500 19 LEU A 27 -92.88 -106.63 REMARK 500 20 GLU A 30 49.97 -106.71 REMARK 500 20 GLU A 31 70.10 -104.78 REMARK 500 21 LYS A 2 53.11 -164.02 REMARK 500 21 SER A 19 -39.27 -39.66 REMARK 500 21 GLU A 30 43.88 -102.50 REMARK 500 22 LYS A 2 55.02 -152.59 REMARK 500 22 LEU A 27 -60.79 -90.44 REMARK 500 23 LYS A 2 47.13 -152.79 REMARK 500 23 SER A 19 -39.81 -37.92 REMARK 500 24 LYS A 2 51.22 -161.48 REMARK 500 24 SER A 19 -38.13 -39.39 REMARK 500 24 ARG A 32 60.19 -104.99 REMARK 500 25 LYS A 2 46.01 -154.90 REMARK 500 25 LEU A 27 -71.99 -97.90 REMARK 500 25 LEU A 28 -63.50 -105.13 REMARK 500 26 LYS A 2 50.81 -144.56 REMARK 500 26 LEU A 27 -63.59 -101.78 REMARK 500 26 LEU A 28 -61.11 -97.34 REMARK 500 27 LYS A 2 53.35 -151.40 REMARK 500 27 LEU A 27 -68.59 -99.01 REMARK 500 28 LEU A 27 -66.20 -97.40 REMARK 500 29 SER A 19 -39.47 -38.58 REMARK 500 29 LEU A 27 -83.24 -104.18 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RIJ RELATED DB: PDB REMARK 900 RELATED ID: 1RIK RELATED DB: PDB
REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE PEPTIDE WAS N-TERMINALLY ACETYLATED REMARK 999 AND C-TERMINALLY AMIDATED, THE COORDINATES REMARK 999 DO NOT REFLECT THESE MODIFICATIONS
DBREF 1RIM A 1 33 PDB 1RIM 1RIM 1 33
SEQRES 1 A 33 TYR LYS PHE ALA CYS PRO GLU CYS PRO LYS ARG PHE MET SEQRES 2 A 33 ARG SER ASP HIS LEU SER LYS HIS ILE THR LEU HIS GLU SEQRES 3 A 33 LEU LEU GLY GLU GLU ARG ARG
HELIX 1 1 ARG A 14 GLU A 26 1 13
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000