10 20 30 40 50 60 70 80 1RIK - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER DE NOVO PROTEIN 17-NOV-03 1RIK
TITLE E6-BINDING ZINC FINGER (E6APC1)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: E6APC1 PEPTIDE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED
KEYWDS E6-BINDING DOMAIN, ZINC FINGER, HUMAN PAPILLOMAVIRUS, HPV KEYWDS 2 E6 PROTEIN, DE NOVO PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 50
AUTHOR Y.LIU,Z.LIU,E.ANDROPHY,J.CHEN,J.D.BALEJA
REVDAT 2 24-FEB-09 1RIK 1 VERSN REVDAT 1 03-AUG-04 1RIK 0
JRNL AUTH Y.LIU,Z.LIU,E.ANDROPHY,J.CHEN,J.D.BALEJA JRNL TITL DESIGN AND CHARACTERIZATION OF HELICAL PEPTIDES JRNL TITL 2 THAT INHIBIT THE E6 PROTEIN OF PAPILLOMAVIRUS. JRNL REF BIOCHEMISTRY V. 43 7421 2004 JRNL REFN ISSN 0006-2960 JRNL PMID 15182185 JRNL DOI 10.1021/BI049552A
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER, ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1RIK COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-NOV-03. REMARK 100 THE RCSB ID CODE IS RCSB020774.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 10MM DEUTERATED IMIDAZOLE, REMARK 210 4MM ZNSO4, 1MM DEUTERATED DTT, REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2 TO 3.0MM PEPTIDE, 10MM REMARK 210 DEUTERATED IMIDAZOLE, 4MM REMARK 210 ZNSO4, 1MM DEUTERATED DTT, AT REMARK 210 PH 6.0, 90% H2O, 10% D2O; 1.2 REMARK 210 TO 3.0MM PEPTIDE, 10MM REMARK 210 DEUTERATED IMIDAZOLE, 4MM REMARK 210 ZNSO4, 1MM DEUTERATED DTT, AT REMARK 210 PH 6.0, 99.96% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D TOCSY, 2D NOESY, DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, CNS 1.1 REMARK 210 METHOD USED : DYNAMICAL ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 50 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 33 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D REMARK 210 HOMONUCLEAR TECHNIQUES
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 2 PRO A 9 44.63 -91.19 REMARK 500 2 ASN A 27 67.71 -108.99 REMARK 500 3 LYS A 2 -61.83 -94.77 REMARK 500 3 PRO A 9 38.84 -91.50 REMARK 500 3 LYS A 28 75.47 -157.23 REMARK 500 4 PRO A 9 39.69 -90.80 REMARK 500 5 PRO A 9 39.50 -93.49 REMARK 500 5 ASN A 27 138.42 -177.90 REMARK 500 6 PRO A 9 38.82 -90.86 REMARK 500 7 PRO A 9 37.14 -90.60 REMARK 500 8 PRO A 9 38.22 -90.90 REMARK 500 9 PRO A 9 43.36 -91.16 REMARK 500 10 PRO A 9 38.35 -90.48 REMARK 500 11 PRO A 9 38.03 -90.90 REMARK 500 12 PRO A 9 38.70 -91.37 REMARK 500 13 PRO A 9 37.97 -89.95 REMARK 500 13 LYS A 28 61.56 -106.74 REMARK 500 14 PRO A 9 43.94 -91.70 REMARK 500 15 LYS A 2 -61.52 -95.14 REMARK 500 15 PRO A 9 42.89 -89.49 REMARK 500 16 PRO A 9 46.26 -90.98 REMARK 500 16 LYS A 28 -53.30 -123.01 REMARK 500 17 PRO A 9 41.39 -90.21 REMARK 500 18 PRO A 9 37.70 -90.86 REMARK 500 19 PRO A 9 42.49 -90.33 REMARK 500 20 PRO A 9 36.90 -88.95 REMARK 500 21 PRO A 9 39.72 -90.26 REMARK 500 22 PRO A 9 38.24 -90.60 REMARK 500 23 ALA A 4 122.09 -170.26 REMARK 500 23 PRO A 9 32.08 -91.07 REMARK 500 23 LYS A 28 40.61 -147.65 REMARK 500 25 PRO A 9 46.71 -92.20 REMARK 500 26 PRO A 9 45.12 -89.81 REMARK 500 27 PRO A 9 55.23 -93.05 REMARK 500 27 GLU A 26 39.67 -95.21 REMARK 500 27 ASN A 27 49.42 -164.40 REMARK 500 27 LYS A 28 89.82 -151.40 REMARK 500 28 PRO A 9 39.78 -90.15 REMARK 500 29 PRO A 9 46.45 -92.19 REMARK 500 30 PRO A 9 39.44 -89.77 REMARK 500 31 LYS A 2 -65.73 -95.17 REMARK 500 31 PRO A 9 38.11 -89.79 REMARK 500 32 PRO A 9 46.05 -92.79 REMARK 500 32 GLU A 26 -70.50 -56.58 REMARK 500 32 ASN A 27 137.10 -177.03 REMARK 500 33 PRO A 9 38.03 -90.13 REMARK 500 34 PRO A 9 42.59 -90.68 REMARK 500 34 GLU A 26 57.54 -91.87 REMARK 500 34 ASN A 27 93.95 -168.33 REMARK 500 35 PRO A 9 30.25 -89.51 REMARK 500 36 PRO A 9 43.80 -90.37 REMARK 500 37 PRO A 9 52.08 -93.48 REMARK 500 37 GLU A 26 51.73 -90.25 REMARK 500 38 PRO A 9 45.79 -90.22 REMARK 500 39 PRO A 9 44.91 -91.07 REMARK 500 40 PRO A 9 38.01 -90.74 REMARK 500 40 ASN A 27 70.35 -103.12 REMARK 500 41 PRO A 9 43.14 -90.45 REMARK 500 42 PRO A 9 46.75 -90.66 REMARK 500 42 LYS A 28 -69.69 -123.77 REMARK 500 43 PRO A 9 44.49 -91.69 REMARK 500 44 PRO A 9 46.74 -91.31 REMARK 500 45 PRO A 9 40.23 -90.89 REMARK 500 46 PRO A 9 39.40 -90.77 REMARK 500 47 PRO A 9 39.22 -90.70 REMARK 500 48 PRO A 9 40.98 -90.52 REMARK 500 49 PRO A 9 43.30 -91.30 REMARK 500 50 PRO A 9 34.93 -90.31 REMARK 500 50 ILE A 22 -9.55 -58.92 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RIJ RELATED DB: PDB REMARK 900 RELATED ID: 1RIM RELATED DB: PDB
REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE PEPTIDE WAS N-TERMINALLY ACETYLATED REMARK 999 AND C-TERMINALLY AMIDATED, THE COORDINATES REMARK 999 DO NOT REFLECT THESE MODIFICATIONS
DBREF 1RIK A 1 29 PDB 1RIK 1RIK 1 29
SEQRES 1 A 29 TYR LYS PHE ALA CYS PRO GLU CYS PRO LYS ARG PHE MET SEQRES 2 A 29 ARG SER ASP HIS LEU THR LEU HIS ILE LEU LEU HIS GLU SEQRES 3 A 29 ASN LYS LYS
HELIX 1 1 SER A 15 LEU A 23 1 9 HELIX 2 2 LEU A 24 ASN A 27 5 4
SHEET 1 A 2 PHE A 3 ALA A 4 0 SHEET 2 A 2 ARG A 11 PHE A 12 -1 O PHE A 12 N PHE A 3
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000