1RIJ - Header Asymmetric Unit

HEADER DE NOVO PROTEIN 17-NOV-03 1RIJ

TITLE E6-BIND TRP-CAGE (E6APN1)

COMPND MOL_ID: 1; COMPND 2 MOLECULE: E6APN1 PEPTIDE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED

KEYWDS TRP-CAGE, E6-BINDING DOMAIN, HUMAN PAPILLOMAVIRUS, HPV E6 KEYWDS 2 PROTEIN, DE NOVO PROTEIN

EXPDTA SOLUTION NMR

NUMMDL 30

AUTHOR Y.LIU,Z.LIU,E.ANDROPHY,J.CHEN,J.D.BALEJA

REVDAT 2 24-FEB-09 1RIJ 1 VERSN REVDAT 1 03-AUG-04 1RIJ 0

JRNL AUTH Y.LIU,Z.LIU,E.ANDROPHY,J.CHEN,J.D.BALEJA JRNL TITL DESIGN AND CHARACTERIZATION OF HELICAL PEPTIDES JRNL TITL 2 THAT INHIBIT THE E6 PROTEIN OF PAPILLOMAVIRUS. JRNL REF BIOCHEMISTRY V. 43 7421 2004 JRNL REFN ISSN 0006-2960 JRNL PMID 15182185 JRNL DOI 10.1021/BI049552A

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER, ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 1RIJ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-NOV-03. REMARK 100 THE RCSB ID CODE IS RCSB020773.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 278 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NO SALTS REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 5.0 ~ 6.0MM PEPTIDE, PH 6.5, REMARK 210 90% H2O, 10% D2O; 5.0 ~ 6.0MM REMARK 210 PEPTIDE, PH 6.5, 99.96% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D TOCSY, 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, CNS 1.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 30 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 30 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 24 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D REMARK 210 HOMONUCLEAR TECHNIQUES

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 2 ASP A 12 32.71 -96.92 REMARK 500 3 PRO A 22 88.76 -57.55 REMARK 500 4 PRO A 22 93.48 -43.33 REMARK 500 5 PRO A 22 77.78 -64.50 REMARK 500 7 PRO A 22 92.23 -42.25 REMARK 500 8 ASP A 12 37.42 -98.86 REMARK 500 8 PRO A 22 76.13 -63.78 REMARK 500 9 ASP A 12 30.56 -97.00 REMARK 500 9 PRO A 22 76.15 -67.57 REMARK 500 13 ASP A 12 35.18 -99.28 REMARK 500 13 PRO A 22 74.14 -69.52 REMARK 500 15 PRO A 22 86.14 -60.67 REMARK 500 17 ASP A 12 41.58 -99.19 REMARK 500 19 ASP A 12 33.81 -99.62 REMARK 500 21 LEU A 2 -60.11 -99.39 REMARK 500 23 ASP A 12 35.56 -98.66 REMARK 500 24 PRO A 22 99.92 -48.06 REMARK 500 25 ASP A 12 31.42 -99.43 REMARK 500 26 ASP A 12 39.92 -99.70 REMARK 500 26 PRO A 22 47.23 -82.71 REMARK 500 27 ASP A 12 40.09 -98.75 REMARK 500 29 PRO A 22 -164.35 -64.56 REMARK 500 REMARK 500 REMARK: NULL

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RIK RELATED DB: PDB REMARK 900 RELATED ID: 1RIM RELATED DB: PDB

REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE PEPTIDE WAS N-TERMINALLY ACETYLATED REMARK 999 AND C-TERMINALLY AMIDATED, THE COORDINATES REMARK 999 DO NOT REFLECT THESE MODIFICATIONS

DBREF 1RIJ A 1 23 PDB 1RIJ 1RIJ 1 23

SEQRES 1 A 23 ALA LEU GLN GLU LEU LEU GLY GLN TRP LEU LYS ASP GLY SEQRES 2 A 23 GLY PRO SER SER GLY ARG PRO PRO PRO SER

HELIX 1 1 ALA A 1 ASP A 12 1 12 HELIX 2 2 GLY A 13 GLY A 18 5 6

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000