10 20 30 40 50 60 70 80 1RHS - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 16-JUL-97 1RHS
TITLE SULFUR-SUBSTITUTED RHODANESE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SULFUR-SUBSTITUTED RHODANESE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.8.1.1
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 ORGAN: LIVER; SOURCE 6 CELLULAR_LOCATION: CYTOPLASM
KEYWDS TRANSFERASE, RHODANESE, SULFURTRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR G.ZANOTTI,F.GLIUBICH,M.COLAPIETRO,L.BARBA
REVDAT 2 24-FEB-09 1RHS 1 VERSN REVDAT 1 21-JAN-98 1RHS 0
JRNL AUTH F.GLIUBICH,R.BERNI,M.COLAPIETRO,L.BARBA,G.ZANOTTI JRNL TITL STRUCTURE OF SULFUR-SUBSTITUTED RHODANESE AT 1.36 JRNL TITL 2 A RESOLUTION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 54 481 1998 JRNL REFN ISSN 0907-4449 JRNL PMID 9761843 JRNL DOI 10.1107/S090744499701216X
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.H.PLOEGMAN,G.DRENT,K.H.KALK,W.G.HOL REMARK 1 TITL THE STRUCTURE OF BOVINE LIVER RHODANESE. II. THE REMARK 1 TITL 2 ACTIVE SITE IN THE SULFUR-SUBSTITUTED AND THE REMARK 1 TITL 3 SULFUR-FREE ENZYME REMARK 1 REF J.MOL.BIOL. V. 127 149 1979 REMARK 1 REFN ISSN 0022-2836
REMARK 2 REMARK 2 RESOLUTION. 1.36 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-93 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 74.0 REMARK 3 CROSS-VALIDATION METHOD : FREE R VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : EVERY 5TH REFLECTION REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.169 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.159 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 2792 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 5582 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.141 REMARK 3 FREE R VALUE (F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 42221 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2327 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 407 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 11056.00 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 8872.00 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 0 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 24750 REMARK 3 NUMBER OF RESTRAINTS : 29262 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.030 REMARK 3 ANGLE DISTANCES (A) : 0.030 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.200 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.200 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.200 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.000 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.000 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.000 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : SHELXL REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1RHS COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : JUL-96 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : MARSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56060 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.360 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 74.0 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : 0.06700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 45.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.30 REMARK 200 R MERGE FOR SHELL (I) : 0.33000 REMARK 200 R SYM FOR SHELL (I) : 0.33000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SHELXL-93 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.6
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 77.18200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.65600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 77.18200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.65600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 294 REMARK 465 LYS A 295 REMARK 465 ALA A 296
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 503 O HOH A 504 1.23 REMARK 500 O HOH A 452 O HOH A 572 1.25 REMARK 500 OE2 GLU A 226 O HOH A 554 1.25 REMARK 500 O HOH A 513 O HOH A 706 1.25 REMARK 500 NE ARG A 41 O HOH A 380 1.26 REMARK 500 CB PRO A 192 O HOH A 450 1.29 REMARK 500 O HOH A 336 O HOH A 347 1.42 REMARK 500 CG MET A 231 O HOH A 397 1.42 REMARK 500 O HOH A 322 O HOH A 402 1.53 REMARK 500 O HOH A 371 O HOH A 391 1.53 REMARK 500 CD GLU A 226 O HOH A 554 1.61 REMARK 500 CG2 THR A 217 O HOH A 348 1.64 REMARK 500 O HOH A 443 O HOH A 650 1.66 REMARK 500 CG PRO A 192 O HOH A 450 1.73 REMARK 500 CB MET A 231 O HOH A 397 1.80 REMARK 500 NE2 HIS A 2 CD ARG A 121 1.81 REMARK 500 N ARG A 50 O HOH A 462 1.83 REMARK 500 CD ARG A 41 O HOH A 380 1.84 REMARK 500 CA MET A 231 O HOH A 397 1.84 REMARK 500 NE2 HIS A 2 O HOH A 461 1.86 REMARK 500 CD2 HIS A 2 O HOH A 461 1.88 REMARK 500 NZ LYS A 265 OD1 ASP A 267 1.88 REMARK 500 O HOH A 402 O HOH A 529 1.89 REMARK 500 O HOH A 533 O HOH A 552 1.91 REMARK 500 N SER A 224 O HOH A 346 1.96 REMARK 500 O HOH A 503 O HOH A 660 1.97 REMARK 500 CA LYS A 13 O HOH A 671 1.98 REMARK 500 OD2 ASP A 238 NZ LYS A 241 2.03 REMARK 500 O HOH A 411 O HOH A 610 2.03 REMARK 500 CA GLU A 46 O HOH A 391 2.04 REMARK 500 O LEU A 48 O HOH A 467 2.04 REMARK 500 CB LYS A 13 O HOH A 671 2.06 REMARK 500 O HOH A 507 O HOH A 640 2.06 REMARK 500 C GLU A 49 O HOH A 462 2.09 REMARK 500 NE2 HIS A 2 NE ARG A 121 2.10 REMARK 500 CD1 LEU A 103 O HOH A 658 2.13 REMARK 500 OE1 GLU A 227 O HOH A 346 2.15 REMARK 500 CB LYS A 223 O HOH A 346 2.19 REMARK 500 C PRO A 26 O HOH A 411 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 172 OE2 GLU A 172 2657 0.93 REMARK 500 CG GLU A 42 O HOH A 527 4557 1.01 REMARK 500 CB LYS A 45 O HOH A 663 4557 1.07 REMARK 500 CB GLU A 42 O HOH A 527 4557 1.36 REMARK 500 CG LYS A 45 O HOH A 663 4557 1.36 REMARK 500 CD GLU A 42 O HOH A 527 4557 1.49 REMARK 500 CD LYS A 45 O HOH A 663 4557 1.67 REMARK 500 O HOH A 533 O HOH A 668 1554 2.00 REMARK 500 OE1 GLU A 42 O HOH A 527 4557 2.14 REMARK 500 CD GLU A 172 OE2 GLU A 172 2657 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 17 CD GLU A 17 OE2 -0.076 REMARK 500 HIS A 51 NE2 HIS A 51 CD2 -0.071 REMARK 500 GLU A 148 CB GLU A 148 CG -0.114 REMARK 500 GLU A 148 CD GLU A 148 OE2 0.074 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 1 CB - CA - C ANGL. DEV. = 16.2 DEGREES REMARK 500 HIS A 2 CB - CA - C ANGL. DEV. = -13.7 DEGREES REMARK 500 GLN A 3 N - CA - CB ANGL. DEV. = 11.9 DEGREES REMARK 500 ARG A 20 NE - CZ - NH1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 20 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG A 44 CD - NE - CZ ANGL. DEV. = 8.9 DEGREES REMARK 500 GLU A 62 OE1 - CD - OE2 ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG A 64 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 TYR A 70 CB - CG - CD2 ANGL. DEV. = -4.4 DEGREES REMARK 500 GLU A 148 CB - CG - CD ANGL. DEV. = 39.5 DEGREES REMARK 500 GLU A 148 OE1 - CD - OE2 ANGL. DEV. = -9.9 DEGREES REMARK 500 PHE A 152 CB - CG - CD2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG A 158 CD - NE - CZ ANGL. DEV. = 10.0 DEGREES REMARK 500 ARG A 158 NE - CZ - NH1 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG A 158 NE - CZ - NH2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG A 175 NE - CZ - NH1 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG A 175 NE - CZ - NH2 ANGL. DEV. = 7.7 DEGREES REMARK 500 ARG A 182 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG A 205 CD - NE - CZ ANGL. DEV. = 15.4 DEGREES REMARK 500 ARG A 205 NE - CZ - NH1 ANGL. DEV. = 8.2 DEGREES REMARK 500 ARG A 205 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ASP A 219 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP A 219 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG A 281 NE - CZ - NH1 ANGL. DEV. = -7.8 DEGREES REMARK 500 ARG A 281 NE - CZ - NH2 ANGL. DEV. = 6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 2 128.61 -176.16 REMARK 500 THR A 40 -120.24 -120.05 REMARK 500 PHE A 106 -73.37 -143.62 REMARK 500 LYS A 249 21.00 -143.71 REMARK 500 VAL A 251 -68.32 -94.72 REMARK 500 SER A 274 -162.53 58.26 REMARK 500 GLN A 290 10.28 -69.15 REMARK 500 LYS A 292 -36.33 -155.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 1 HIS A 2 139.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 131 0.21 SIDE_CHAIN REMARK 500 ARG A 158 0.14 SIDE_CHAIN REMARK 500 ARG A 175 0.22 SIDE_CHAIN REMARK 500 ARG A 229 0.27 SIDE_CHAIN REMARK 500 ARG A 248 0.08 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 VAL A 1 171.2 ALPHA-CARBON REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 333 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A 352 DISTANCE = 7.97 ANGSTROMS REMARK 525 HOH A 396 DISTANCE = 8.53 ANGSTROMS REMARK 525 HOH A 400 DISTANCE = 5.24 ANGSTROMS REMARK 525 HOH A 463 DISTANCE = 10.91 ANGSTROMS REMARK 525 HOH A 473 DISTANCE = 7.87 ANGSTROMS REMARK 525 HOH A 489 DISTANCE = 9.26 ANGSTROMS REMARK 525 HOH A 566 DISTANCE = 8.91 ANGSTROMS REMARK 525 HOH A 648 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH A 651 DISTANCE = 11.07 ANGSTROMS REMARK 525 HOH A 659 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 697 DISTANCE = 7.31 ANGSTROMS
DBREF 1RHS A 1 296 UNP P00586 THTR_BOVIN 1 296
SEQADV 1RHS CSS A 247 UNP P00586 CYS 247 CONFLICT
SEQRES 1 A 296 VAL HIS GLN VAL LEU TYR ARG ALA LEU VAL SER THR LYS SEQRES 2 A 296 TRP LEU ALA GLU SER VAL ARG ALA GLY LYS VAL GLY PRO SEQRES 3 A 296 GLY LEU ARG VAL LEU ASP ALA SER TRP TYR SER PRO GLY SEQRES 4 A 296 THR ARG GLU ALA ARG LYS GLU TYR LEU GLU ARG HIS VAL SEQRES 5 A 296 PRO GLY ALA SER PHE PHE ASP ILE GLU GLU CYS ARG ASP SEQRES 6 A 296 LYS ALA SER PRO TYR GLU VAL MET LEU PRO SER GLU ALA SEQRES 7 A 296 GLY PHE ALA ASP TYR VAL GLY SER LEU GLY ILE SER ASN SEQRES 8 A 296 ASP THR HIS VAL VAL VAL TYR ASP GLY ASP ASP LEU GLY SEQRES 9 A 296 SER PHE TYR ALA PRO ARG VAL TRP TRP MET PHE ARG VAL SEQRES 10 A 296 PHE GLY HIS ARG THR VAL SER VAL LEU ASN GLY GLY PHE SEQRES 11 A 296 ARG ASN TRP LEU LYS GLU GLY HIS PRO VAL THR SER GLU SEQRES 12 A 296 PRO SER ARG PRO GLU PRO ALA ILE PHE LYS ALA THR LEU SEQRES 13 A 296 ASN ARG SER LEU LEU LYS THR TYR GLU GLN VAL LEU GLU SEQRES 14 A 296 ASN LEU GLU SER LYS ARG PHE GLN LEU VAL ASP SER ARG SEQRES 15 A 296 ALA GLN GLY ARG TYR LEU GLY THR GLN PRO GLU PRO ASP SEQRES 16 A 296 ALA VAL GLY LEU ASP SER GLY HIS ILE ARG GLY SER VAL SEQRES 17 A 296 ASN MET PRO PHE MET ASN PHE LEU THR GLU ASP GLY PHE SEQRES 18 A 296 GLU LYS SER PRO GLU GLU LEU ARG ALA MET PHE GLU ALA SEQRES 19 A 296 LYS LYS VAL ASP LEU THR LYS PRO LEU ILE ALA THR CSS SEQRES 20 A 296 ARG LYS GLY VAL THR ALA CYS HIS ILE ALA LEU ALA ALA SEQRES 21 A 296 TYR LEU CYS GLY LYS PRO ASP VAL ALA ILE TYR ASP GLY SEQRES 22 A 296 SER TRP PHE GLU TRP PHE HIS ARG ALA PRO PRO GLU THR SEQRES 23 A 296 TRP VAL SER GLN GLY LYS GLY GLY LYS ALA
MODRES 1RHS CSS A 247 CYS S-MERCAPTOCYSTEINE
HET CSS A 247 7
HETNAM CSS S-MERCAPTOCYSTEINE
FORMUL 1 CSS C3 H7 N O2 S2 FORMUL 2 HOH *407(H2 O)
HELIX 1 1 THR A 12 ARG A 20 1 9 HELIX 2 2 ALA A 43 GLU A 49 1 7 HELIX 3 3 GLU A 77 LEU A 87 1 11 HELIX 4 4 ALA A 108 VAL A 117 1 10 HELIX 5 5 GLY A 129 LYS A 135 1 7 HELIX 6 6 ARG A 158 LEU A 160 5 3 HELIX 7 7 TYR A 164 SER A 173 1 10 HELIX 8 8 GLN A 184 LEU A 188 1 5 HELIX 9 9 PHE A 212 PHE A 215 5 4 HELIX 10 10 PRO A 225 LYS A 235 1 11 HELIX 11 11 THR A 252 LEU A 262 5 11 HELIX 12 12 SER A 274 ARG A 281 1 8 HELIX 13 13 PRO A 284 THR A 286 5 3
SHEET 1 A 3 LEU A 28 ASP A 32 0 SHEET 2 A 3 HIS A 94 TYR A 98 1 N HIS A 94 O ARG A 29 SHEET 3 A 3 VAL A 123 VAL A 125 1 N SER A 124 O VAL A 95 SHEET 1 B 2 GLN A 177 ASP A 180 0 SHEET 2 B 2 LEU A 243 THR A 246 1 N ILE A 244 O GLN A 177
LINK N CSS A 247 C THR A 246 1555 1555 1.33 LINK C CSS A 247 N ARG A 248 1555 1555 1.34
CISPEP 1 GLY A 291 LYS A 292 0 2.09 CISPEP 2 LYS A 292 GLY A 293 0 4.75
CRYST1 154.364 49.312 41.676 90.00 99.81 90.00 C 1 2 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.006478 0.000000 0.001120 0.00000
SCALE2 0.000000 0.020279 0.000000 0.00000
SCALE3 0.000000 0.000000 0.024351 0.00000