10 20 30 40 50 60 70 80 1R90 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 28-OCT-03 1R90
TITLE 3D STRUCTURE PREDICTION OF CLPP3 PROTEASE FROM ARABIDOPSIS TITLE 2 THALIANA, USING THE CRYSTAL STRUCTURE OF E. COLI CLPP TITLE 3 (1TYF)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT COMPND 3 (CLPP3); COMPND 4 CHAIN: A; COMPND 5 EC: 3.4.21.92
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 OTHER_DETAILS: ECOTYPE: COLUMBIA 0
KEYWDS SERINE PROTEASE, CLP PROTEASE, ARABIDOPSIS THALIANA
EXPDTA THEORETICAL MODEL
AUTHOR J.B.PELTIER,D.R.RIPOLL,G.FRISO,A.RUDELLA,Y.CAI,J.YTTERBERG, AUTHOR 2 L.GIACOMELLI,J.PILLARDY,K.J.VAN WIJK
REVDAT 2 10-FEB-04 1R90 1 JRNL REVDAT 1 18-NOV-03 1R90 0
JRNL AUTH J.B.PELTIER,D.R.RIPOLL,G.FRISO,A.RUDELLA,Y.CAI, JRNL AUTH 2 J.YTTERBERG,L.GIACOMELLI,J.PILLARDY,K.J.VAN WIJK JRNL TITL CLP PROTEASE COMPLEXES FROM PHOTOSYNTHETIC AND JRNL TITL 2 NON-PHOTOSYNTHETIC PLASTIDS AND MITOCHONDRIA OF JRNL TITL 3 PLANTS, THEIR PREDICTED THREE-DIMENSIONAL JRNL TITL 4 STRUCTURES, AND FUNCTIONAL IMPLICATIONS. JRNL REF J.BIOL.CHEM. V. 279 4768 2004 JRNL REFN ASTM JBCHA3 US ISSN 0021-9258
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : MODELLER REMARK 3 AUTHORS : SALI REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1R90 COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-2003. REMARK 100 THE RCSB ID CODE IS RCSB020586.
REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: NULL
REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 MET A 3 REMARK 465 SER A 4 REMARK 465 LEU A 5 REMARK 465 ARG A 6 REMARK 465 LEU A 7 REMARK 465 ALA A 8 REMARK 465 SER A 9 REMARK 465 SER A 10 REMARK 465 SER A 11 REMARK 465 THR A 12 REMARK 465 SER A 13 REMARK 465 ASN A 14 REMARK 465 PRO A 15 REMARK 465 ILE A 16 REMARK 465 CYS A 17 REMARK 465 LEU A 18 REMARK 465 LEU A 19 REMARK 465 ASN A 20 REMARK 465 PRO A 21 REMARK 465 GLY A 22 REMARK 465 LYS A 23 REMARK 465 ASN A 24 REMARK 465 LEU A 25 REMARK 465 ASN A 26 REMARK 465 PHE A 27 REMARK 465 PRO A 28 REMARK 465 ILE A 29 REMARK 465 ARG A 30 REMARK 465 ASN A 31 REMARK 465 HIS A 32 REMARK 465 ARG A 33 REMARK 465 ILE A 34 REMARK 465 PRO A 35 REMARK 465 LYS A 36 REMARK 465 THR A 37 REMARK 465 SER A 38 REMARK 465 LYS A 39 REMARK 465 PRO A 40 REMARK 465 PHE A 41 REMARK 465 CYS A 42 REMARK 465 VAL A 43 REMARK 465 ARG A 44 REMARK 465 SER A 45 REMARK 465 SER A 46 REMARK 465 MET A 47 REMARK 465 SER A 48 REMARK 465 LEU A 49 REMARK 465 SER A 50 REMARK 465 LYS A 51 REMARK 465 PRO A 52 REMARK 465 PRO A 53 REMARK 465 ARG A 54 REMARK 465 GLN A 55 REMARK 465 THR A 56 REMARK 465 LEU A 57 REMARK 465 SER A 58 REMARK 465 SER A 59 REMARK 465 ASN A 60 REMARK 465 TRP A 61 REMARK 465 ASP A 62 REMARK 465 VAL A 63 REMARK 465 SER A 64 REMARK 465 SER A 65 REMARK 465 PHE A 66 REMARK 465 SER A 67 REMARK 465 ILE A 68 REMARK 465 ASP A 69 REMARK 465 SER A 70 REMARK 465 VAL A 71 REMARK 465 ALA A 72 REMARK 465 GLN A 73 REMARK 465 SER A 74 REMARK 465 PRO A 75 REMARK 465 SER A 76 REMARK 465 ARG A 77 REMARK 465 THR A 292 REMARK 465 ASN A 293 REMARK 465 LEU A 294 REMARK 465 PRO A 295 REMARK 465 SER A 296 REMARK 465 GLU A 297 REMARK 465 ARG A 298 REMARK 465 SER A 299 REMARK 465 MET A 300 REMARK 465 THR A 301 REMARK 465 GLN A 302 REMARK 465 ASN A 303 REMARK 465 GLY A 304 REMARK 465 TYR A 305 REMARK 465 ALA A 306 REMARK 465 ALA A 307 REMARK 465 ILE A 308 REMARK 465 GLU A 309
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: AT1G66670 RELATED DB: TAIR
DBREF 1R90 A 1 309 GB 18408572 NP_564880 1 309
SEQRES 1 A 309 MET GLU MET SER LEU ARG LEU ALA SER SER SER THR SER SEQRES 2 A 309 ASN PRO ILE CYS LEU LEU ASN PRO GLY LYS ASN LEU ASN SEQRES 3 A 309 PHE PRO ILE ARG ASN HIS ARG ILE PRO LYS THR SER LYS SEQRES 4 A 309 PRO PHE CYS VAL ARG SER SER MET SER LEU SER LYS PRO SEQRES 5 A 309 PRO ARG GLN THR LEU SER SER ASN TRP ASP VAL SER SER SEQRES 6 A 309 PHE SER ILE ASP SER VAL ALA GLN SER PRO SER ARG LEU SEQRES 7 A 309 PRO SER PHE GLU GLU LEU ASP THR THR ASN MET LEU LEU SEQRES 8 A 309 ARG GLN ARG ILE VAL PHE LEU GLY SER GLN VAL ASP ASP SEQRES 9 A 309 MET THR ALA ASP LEU VAL ILE SER GLN LEU LEU LEU LEU SEQRES 10 A 309 ASP ALA GLU ASP SER GLU ARG ASP ILE THR LEU PHE ILE SEQRES 11 A 309 ASN SER PRO GLY GLY SER ILE THR ALA GLY MET GLY ILE SEQRES 12 A 309 TYR ASP ALA MET LYS GLN CYS LYS ALA ASP VAL SER THR SEQRES 13 A 309 VAL CYS LEU GLY LEU ALA ALA SER MET GLY ALA PHE LEU SEQRES 14 A 309 LEU ALA SER GLY SER LYS GLY LYS ARG TYR CYS MET PRO SEQRES 15 A 309 ASN SER LYS VAL MET ILE HIS GLN PRO LEU GLY THR ALA SEQRES 16 A 309 GLY GLY LYS ALA THR GLU MET SER ILE ARG ILE ARG GLU SEQRES 17 A 309 MET MET TYR HIS LYS ILE LYS LEU ASN LYS ILE PHE SER SEQRES 18 A 309 ARG ILE THR GLY LYS PRO GLU SER GLU ILE GLU SER ASP SEQRES 19 A 309 THR ASP ARG ASP ASN PHE LEU ASN PRO TRP GLU ALA LYS SEQRES 20 A 309 GLU TYR GLY LEU ILE ASP ALA VAL ILE ASP ASP GLY LYS SEQRES 21 A 309 PRO GLY LEU ILE ALA PRO ILE GLY ASP GLY THR PRO PRO SEQRES 22 A 309 PRO LYS THR LYS VAL TRP ASP LEU TRP LYS VAL GLU GLY SEQRES 23 A 309 THR LYS LYS ASP ASN THR ASN LEU PRO SER GLU ARG SER SEQRES 24 A 309 MET THR GLN ASN GLY TYR ALA ALA ILE GLU
HELIX 1 1 LEU A 78 GLN A 93 1 16 HELIX 2 2 ASP A 103 ASP A 121 1 19 HELIX 3 3 SER A 136 CYS A 150 1 15 HELIX 4 4 SER A 164 SER A 172 1 9 HELIX 5 5 LYS A 198 GLY A 225 1 28 HELIX 6 6 PRO A 227 ASP A 236 1 10 HELIX 7 7 ASN A 242 GLY A 250 1 9 HELIX 8 8 LYS A 260 THR A 271 1 12 HELIX 9 9 THR A 276 ASN A 291 1 16
SHEET 1 A 5 ILE A 95 GLY A 99 0 SHEET 2 A 5 ILE A 126 SER A 132 1 O THR A 127 N VAL A 96 SHEET 3 A 5 VAL A 154 ALA A 163 1 O VAL A 157 N ILE A 130 SHEET 4 A 5 LYS A 185 ILE A 188 1 O LYS A 185 N ALA A 162 SHEET 5 A 5 ASN A 239 LEU A 241 -1 O LEU A 241 N VAL A 186 SHEET 1 B 5 ILE A 95 GLY A 99 0 SHEET 2 B 5 ILE A 126 SER A 132 1 O THR A 127 N VAL A 96 SHEET 3 B 5 VAL A 154 ALA A 163 1 O VAL A 157 N ILE A 130 SHEET 4 B 5 ARG A 178 CYS A 180 1 O TYR A 179 N THR A 156 SHEET 5 B 5 ALA A 254 VAL A 255 1 O ALA A 254 N CYS A 180
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000