10 20 30 40 50 60 70 80 1R8G - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric Unit
HEADER LIGASE 24-OCT-03 1R8G
TITLE STRUCTURE AND FUNCTION OF YBDK
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN YBDK; COMPND 3 CHAIN: A, B; COMPND 4 EC: 6.3.-.-; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: YBDK, B0581; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21STAR(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET100-D-TOPO
KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, YBDK, HYPOTHETICAL KEYWDS 2 PROTEIN, CARBOXYLATE-AMINE LIGASE, STRUCTURE 2 FUNCTION KEYWDS 3 PROJECT, S2F
EXPDTA X-RAY DIFFRACTION
AUTHOR C.LEHMANN,V.DOSEEVA,S.PULLALAREVU,W.KRAJEWSKI,A.HOWARD, AUTHOR 2 O.HERZBERG,STRUCTURE 2 FUNCTION PROJECT (S2F)
REVDAT 2 24-FEB-09 1R8G 1 VERSN REVDAT 1 17-AUG-04 1R8G 0
JRNL AUTH C.LEHMANN,V.DOSEEVA,S.PULLALAREVU,W.KRAJEWSKI, JRNL AUTH 2 A.HOWARD,O.HERZBERG JRNL TITL YBDK IS A CARBOXYLATE-AMINE LIGASE WITH A JRNL TITL 2 GAMMA-GLUTAMYL:CYSTEINE LIGASE ACTIVITY: CRYSTAL JRNL TITL 3 STRUCTURE AND ENZYMATIC ASSAYS JRNL REF PROTEINS: V. 56 376 2004 JRNL REF 2 STRUCT.,FUNCT.,GENET. JRNL REFN ISSN 0887-3585 JRNL PMID 15211520 JRNL DOI 10.1002/PROT.20103
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 2.9 REMARK 3 NUMBER OF REFLECTIONS : 61334 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1766 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.17 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE : 0.3940 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 16 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5578 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 656 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.47 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1R8G COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-03. REMARK 100 THE RCSB ID CODE IS RCSB020566.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97925 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SI(111) REMARK 200 DOUBLE CRYSTAL SYSTEM REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62133 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 29.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.8 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.05500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.3400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 49.4 REMARK 200 DATA REDUNDANCY IN SHELL : 0.90 REMARK 200 R MERGE FOR SHELL (I) : 0.10300 REMARK 200 R SYM FOR SHELL (I) : 0.12800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE/RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 20% W/V PEG 3350, 20MM REMARK 280 TRIS-HCL, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 294K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.16000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). THE BIOLOGICAL UNIT IS REMARK 300 UNKNOWN.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 PRO A 2 REMARK 465 GLN A 106 REMARK 465 ARG A 107 REMARK 465 GLN A 108 REMARK 465 GLU A 109 REMARK 465 VAL A 110 REMARK 465 CYS A 111 REMARK 465 ASP A 112 REMARK 465 ASN A 113 REMARK 465 GLU A 114 REMARK 465 ARG A 115 REMARK 465 TYR A 116 REMARK 465 GLN A 117 REMARK 465 ARG A 118 REMARK 465 THR A 119 REMARK 465 LEU A 120 REMARK 465 GLU A 121 REMARK 465 GLY A 371 REMARK 465 ASP A 372 REMARK 465 MSE B 1 REMARK 465 ASP B 53 REMARK 465 ARG B 107 REMARK 465 GLN B 108 REMARK 465 GLU B 109 REMARK 465 VAL B 110 REMARK 465 CYS B 111 REMARK 465 ASP B 112 REMARK 465 ASN B 113 REMARK 465 GLU B 114 REMARK 465 ARG B 115 REMARK 465 TYR B 116 REMARK 465 GLY B 371 REMARK 465 ASP B 372
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 217 O HOH A 399 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 39 36.51 -77.00 REMARK 500 ALA A 40 -15.09 -145.65 REMARK 500 LYS A 42 25.22 -70.70 REMARK 500 ASN A 43 -1.38 -176.33 REMARK 500 GLU A 56 4.90 85.82 REMARK 500 ALA A 167 51.15 -151.87 REMARK 500 SER A 168 58.68 -156.86 REMARK 500 ARG A 177 -19.95 82.24 REMARK 500 LEU A 342 73.22 26.73 REMARK 500 ASP B 33 13.63 -151.62 REMARK 500 SER B 34 6.34 -58.90 REMARK 500 ASN B 43 -45.70 83.99 REMARK 500 THR B 55 96.45 55.08 REMARK 500 GLN B 128 59.60 -94.79 REMARK 500 GLN B 129 -161.38 -117.86 REMARK 500 ALA B 167 47.20 -160.94 REMARK 500 SER B 168 62.33 -151.44 REMARK 500 ARG B 177 -6.01 84.49 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 618 DISTANCE = 7.05 ANGSTROMS REMARK 525 HOH A 620 DISTANCE = 8.25 ANGSTROMS REMARK 525 HOH B 628 DISTANCE = 6.87 ANGSTROMS REMARK 525 HOH B 632 DISTANCE = 5.06 ANGSTROMS REMARK 525 HOH A 633 DISTANCE = 6.83 ANGSTROMS REMARK 525 HOH A 637 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH B 639 DISTANCE = 5.27 ANGSTROMS REMARK 525 HOH A 644 DISTANCE = 5.31 ANGSTROMS REMARK 525 HOH B 648 DISTANCE = 5.05 ANGSTROMS REMARK 525 HOH A 651 DISTANCE = 5.46 ANGSTROMS REMARK 525 HOH A 664 DISTANCE = 7.48 ANGSTROMS REMARK 525 HOH A 667 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH A 673 DISTANCE = 5.10 ANGSTROMS REMARK 525 HOH A 678 DISTANCE = 5.49 ANGSTROMS REMARK 525 HOH A 684 DISTANCE = 8.39 ANGSTROMS REMARK 525 HOH B 686 DISTANCE = 7.22 ANGSTROMS REMARK 525 HOH B 690 DISTANCE = 5.28 ANGSTROMS REMARK 525 HOH B 699 DISTANCE = 5.16 ANGSTROMS REMARK 525 HOH B 703 DISTANCE = 5.95 ANGSTROMS
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: YBDK RELATED DB: TARGETDB
DBREF 1R8G A 1 372 UNP P77213 CAAL_ECOLI 1 372 DBREF 1R8G B 1 372 UNP P77213 CAAL_ECOLI 1 372
SEQADV 1R8G MSE A 1 UNP P77213 MET 1 MODIFIED RESIDUE SEQADV 1R8G MSE A 20 UNP P77213 MET 20 MODIFIED RESIDUE SEQADV 1R8G MSE A 36 UNP P77213 MET 36 MODIFIED RESIDUE SEQADV 1R8G MSE A 58 UNP P77213 MET 58 MODIFIED RESIDUE SEQADV 1R8G MSE A 79 UNP P77213 MET 79 MODIFIED RESIDUE SEQADV 1R8G MSE A 171 UNP P77213 MET 171 MODIFIED RESIDUE SEQADV 1R8G MSE A 195 UNP P77213 MET 195 MODIFIED RESIDUE SEQADV 1R8G MSE A 216 UNP P77213 MET 216 MODIFIED RESIDUE SEQADV 1R8G MSE A 241 UNP P77213 MET 241 MODIFIED RESIDUE SEQADV 1R8G MSE A 253 UNP P77213 MET 253 MODIFIED RESIDUE SEQADV 1R8G MSE A 348 UNP P77213 MET 348 MODIFIED RESIDUE SEQADV 1R8G MSE B 1 UNP P77213 MET 1 MODIFIED RESIDUE SEQADV 1R8G MSE B 20 UNP P77213 MET 20 MODIFIED RESIDUE SEQADV 1R8G MSE B 36 UNP P77213 MET 36 MODIFIED RESIDUE SEQADV 1R8G MSE B 58 UNP P77213 MET 58 MODIFIED RESIDUE SEQADV 1R8G MSE B 79 UNP P77213 MET 79 MODIFIED RESIDUE SEQADV 1R8G MSE B 171 UNP P77213 MET 171 MODIFIED RESIDUE SEQADV 1R8G MSE B 195 UNP P77213 MET 195 MODIFIED RESIDUE SEQADV 1R8G MSE B 216 UNP P77213 MET 216 MODIFIED RESIDUE SEQADV 1R8G MSE B 241 UNP P77213 MET 241 MODIFIED RESIDUE SEQADV 1R8G MSE B 253 UNP P77213 MET 253 MODIFIED RESIDUE SEQADV 1R8G MSE B 348 UNP P77213 MET 348 MODIFIED RESIDUE
SEQRES 1 A 372 MSE PRO LEU PRO ASP PHE HIS VAL SER GLU PRO PHE THR SEQRES 2 A 372 LEU GLY ILE GLU LEU GLU MSE GLN VAL VAL ASN PRO PRO SEQRES 3 A 372 GLY TYR ASP LEU SER GLN ASP SER SER MSE LEU ILE ASP SEQRES 4 A 372 ALA VAL LYS ASN LYS ILE THR ALA GLY GLU VAL LYS HIS SEQRES 5 A 372 ASP ILE THR GLU SER MSE LEU GLU LEU ALA THR ASP VAL SEQRES 6 A 372 CYS ARG ASP ILE ASN GLN ALA ALA GLY GLN PHE SER ALA SEQRES 7 A 372 MSE GLN LYS VAL VAL LEU GLN ALA ALA THR ASP HIS HIS SEQRES 8 A 372 LEU GLU ILE CYS GLY GLY GLY THR HIS PRO PHE GLN LYS SEQRES 9 A 372 TRP GLN ARG GLN GLU VAL CYS ASP ASN GLU ARG TYR GLN SEQRES 10 A 372 ARG THR LEU GLU ASN PHE GLY TYR LEU ILE GLN GLN ALA SEQRES 11 A 372 THR VAL PHE GLY GLN HIS VAL HIS VAL GLY CYS ALA SER SEQRES 12 A 372 GLY ASP ASP ALA ILE TYR LEU LEU HIS GLY LEU SER ARG SEQRES 13 A 372 PHE VAL PRO HIS PHE ILE ALA LEU SER ALA ALA SER PRO SEQRES 14 A 372 TYR MSE GLN GLY THR ASP THR ARG PHE ALA SER SER ARG SEQRES 15 A 372 PRO ASN ILE PHE SER ALA PHE PRO ASP ASN GLY PRO MSE SEQRES 16 A 372 PRO TRP VAL SER ASN TRP GLN GLN PHE GLU ALA LEU PHE SEQRES 17 A 372 ARG CYS LEU SER TYR THR THR MSE ILE ASP SER ILE LYS SEQRES 18 A 372 ASP LEU HIS TRP ASP ILE ARG PRO SER PRO HIS PHE GLY SEQRES 19 A 372 THR VAL GLU VAL ARG VAL MSE ASP THR PRO LEU THR LEU SEQRES 20 A 372 SER HIS ALA VAL ASN MSE ALA GLY LEU ILE GLN ALA THR SEQRES 21 A 372 ALA HIS TRP LEU LEU THR GLU ARG PRO PHE LYS HIS GLN SEQRES 22 A 372 GLU LYS ASP TYR LEU LEU TYR LYS PHE ASN ARG PHE GLN SEQRES 23 A 372 ALA CYS ARG TYR GLY LEU GLU GLY VAL ILE THR ASP PRO SEQRES 24 A 372 HIS THR GLY ASP ARG ARG PRO LEU THR GLU ASP THR LEU SEQRES 25 A 372 ARG LEU LEU GLU LYS ILE ALA PRO SER ALA HIS LYS ILE SEQRES 26 A 372 GLY ALA SER SER ALA ILE GLU ALA LEU HIS ARG GLN VAL SEQRES 27 A 372 VAL SER GLY LEU ASN GLU ALA GLN LEU MSE ARG ASP PHE SEQRES 28 A 372 VAL ALA ASP GLY GLY SER LEU ILE GLY LEU VAL LYS LYS SEQRES 29 A 372 HIS CYS GLU ILE TRP ALA GLY ASP SEQRES 1 B 372 MSE PRO LEU PRO ASP PHE HIS VAL SER GLU PRO PHE THR SEQRES 2 B 372 LEU GLY ILE GLU LEU GLU MSE GLN VAL VAL ASN PRO PRO SEQRES 3 B 372 GLY TYR ASP LEU SER GLN ASP SER SER MSE LEU ILE ASP SEQRES 4 B 372 ALA VAL LYS ASN LYS ILE THR ALA GLY GLU VAL LYS HIS SEQRES 5 B 372 ASP ILE THR GLU SER MSE LEU GLU LEU ALA THR ASP VAL SEQRES 6 B 372 CYS ARG ASP ILE ASN GLN ALA ALA GLY GLN PHE SER ALA SEQRES 7 B 372 MSE GLN LYS VAL VAL LEU GLN ALA ALA THR ASP HIS HIS SEQRES 8 B 372 LEU GLU ILE CYS GLY GLY GLY THR HIS PRO PHE GLN LYS SEQRES 9 B 372 TRP GLN ARG GLN GLU VAL CYS ASP ASN GLU ARG TYR GLN SEQRES 10 B 372 ARG THR LEU GLU ASN PHE GLY TYR LEU ILE GLN GLN ALA SEQRES 11 B 372 THR VAL PHE GLY GLN HIS VAL HIS VAL GLY CYS ALA SER SEQRES 12 B 372 GLY ASP ASP ALA ILE TYR LEU LEU HIS GLY LEU SER ARG SEQRES 13 B 372 PHE VAL PRO HIS PHE ILE ALA LEU SER ALA ALA SER PRO SEQRES 14 B 372 TYR MSE GLN GLY THR ASP THR ARG PHE ALA SER SER ARG SEQRES 15 B 372 PRO ASN ILE PHE SER ALA PHE PRO ASP ASN GLY PRO MSE SEQRES 16 B 372 PRO TRP VAL SER ASN TRP GLN GLN PHE GLU ALA LEU PHE SEQRES 17 B 372 ARG CYS LEU SER TYR THR THR MSE ILE ASP SER ILE LYS SEQRES 18 B 372 ASP LEU HIS TRP ASP ILE ARG PRO SER PRO HIS PHE GLY SEQRES 19 B 372 THR VAL GLU VAL ARG VAL MSE ASP THR PRO LEU THR LEU SEQRES 20 B 372 SER HIS ALA VAL ASN MSE ALA GLY LEU ILE GLN ALA THR SEQRES 21 B 372 ALA HIS TRP LEU LEU THR GLU ARG PRO PHE LYS HIS GLN SEQRES 22 B 372 GLU LYS ASP TYR LEU LEU TYR LYS PHE ASN ARG PHE GLN SEQRES 23 B 372 ALA CYS ARG TYR GLY LEU GLU GLY VAL ILE THR ASP PRO SEQRES 24 B 372 HIS THR GLY ASP ARG ARG PRO LEU THR GLU ASP THR LEU SEQRES 25 B 372 ARG LEU LEU GLU LYS ILE ALA PRO SER ALA HIS LYS ILE SEQRES 26 B 372 GLY ALA SER SER ALA ILE GLU ALA LEU HIS ARG GLN VAL SEQRES 27 B 372 VAL SER GLY LEU ASN GLU ALA GLN LEU MSE ARG ASP PHE SEQRES 28 B 372 VAL ALA ASP GLY GLY SER LEU ILE GLY LEU VAL LYS LYS SEQRES 29 B 372 HIS CYS GLU ILE TRP ALA GLY ASP
MODRES 1R8G MSE A 20 MET SELENOMETHIONINE MODRES 1R8G MSE A 36 MET SELENOMETHIONINE MODRES 1R8G MSE A 58 MET SELENOMETHIONINE MODRES 1R8G MSE A 79 MET SELENOMETHIONINE MODRES 1R8G MSE A 171 MET SELENOMETHIONINE MODRES 1R8G MSE A 195 MET SELENOMETHIONINE MODRES 1R8G MSE A 216 MET SELENOMETHIONINE MODRES 1R8G MSE A 241 MET SELENOMETHIONINE MODRES 1R8G MSE A 253 MET SELENOMETHIONINE MODRES 1R8G MSE A 348 MET SELENOMETHIONINE MODRES 1R8G MSE B 20 MET SELENOMETHIONINE MODRES 1R8G MSE B 36 MET SELENOMETHIONINE MODRES 1R8G MSE B 58 MET SELENOMETHIONINE MODRES 1R8G MSE B 79 MET SELENOMETHIONINE MODRES 1R8G MSE B 171 MET SELENOMETHIONINE MODRES 1R8G MSE B 195 MET SELENOMETHIONINE MODRES 1R8G MSE B 216 MET SELENOMETHIONINE MODRES 1R8G MSE B 241 MET SELENOMETHIONINE MODRES 1R8G MSE B 253 MET SELENOMETHIONINE MODRES 1R8G MSE B 348 MET SELENOMETHIONINE
HET MSE A 20 8 HET MSE A 36 8 HET MSE A 58 8 HET MSE A 79 8 HET MSE A 171 8 HET MSE A 195 8 HET MSE A 216 8 HET MSE A 241 8 HET MSE A 253 8 HET MSE A 348 8 HET MSE B 20 8 HET MSE B 36 8 HET MSE B 58 8 HET MSE B 79 8 HET MSE B 171 8 HET MSE B 195 8 HET MSE B 216 8 HET MSE B 241 8 HET MSE B 253 8 HET MSE B 348 8
HETNAM MSE SELENOMETHIONINE
FORMUL 1 MSE 20(C5 H11 N O2 SE) FORMUL 3 HOH *656(H2 O)
HELIX 1 1 SER A 34 ASP A 39 1 6 HELIX 2 2 ASP A 68 HIS A 90 1 23 HELIX 3 3 PHE A 123 GLN A 128 5 6 HELIX 4 4 SER A 143 ARG A 156 1 14 HELIX 5 5 PHE A 157 ALA A 166 1 10 HELIX 6 6 SER A 181 SER A 187 5 7 HELIX 7 7 ASN A 200 SER A 212 1 13 HELIX 8 8 SER A 219 LEU A 223 5 5 HELIX 9 9 THR A 246 ARG A 268 1 23 HELIX 10 10 GLN A 273 LEU A 278 5 6 HELIX 11 11 LEU A 279 GLY A 291 1 13 HELIX 12 12 LEU A 307 ILE A 318 1 12 HELIX 13 13 ILE A 318 ILE A 325 1 8 HELIX 14 14 ALA A 327 GLY A 341 1 15 HELIX 15 15 ASN A 343 ASP A 354 1 12 HELIX 16 16 SER A 357 ALA A 370 1 14 HELIX 17 17 ASP B 33 ASP B 39 1 7 HELIX 18 18 ALA B 40 LYS B 42 5 3 HELIX 19 19 ASP B 68 HIS B 90 1 23 HELIX 20 20 ARG B 118 GLY B 124 1 7 HELIX 21 21 TYR B 125 GLN B 128 5 4 HELIX 22 22 SER B 143 ARG B 156 1 14 HELIX 23 23 PHE B 157 ALA B 166 1 10 HELIX 24 24 SER B 181 ILE B 185 5 5 HELIX 25 25 ASN B 200 SER B 212 1 13 HELIX 26 26 SER B 219 LEU B 223 5 5 HELIX 27 27 THR B 246 ARG B 268 1 23 HELIX 28 28 GLN B 273 LEU B 278 5 6 HELIX 29 29 LEU B 279 GLY B 291 1 13 HELIX 30 30 LEU B 307 ILE B 318 1 12 HELIX 31 31 ILE B 318 GLY B 326 1 9 HELIX 32 32 ALA B 327 GLY B 341 1 15 HELIX 33 33 ASN B 343 ASP B 354 1 12 HELIX 34 34 SER B 357 ALA B 370 1 14
SHEET 1 A 3 ASP A 29 LEU A 30 0 SHEET 2 A 3 LEU A 14 ASN A 24 -1 N ASN A 24 O ASP A 29 SHEET 3 A 3 GLU A 93 CYS A 95 -1 O GLU A 93 N VAL A 23 SHEET 1 B 6 GLU A 49 HIS A 52 0 SHEET 2 B 6 MSE A 58 ALA A 62 -1 O ALA A 62 N GLU A 49 SHEET 3 B 6 LEU A 14 ASN A 24 -1 N LEU A 18 O LEU A 61 SHEET 4 B 6 GLY A 134 GLY A 140 -1 O HIS A 138 N GLY A 15 SHEET 5 B 6 THR A 235 ASP A 242 -1 O VAL A 238 N VAL A 137 SHEET 6 B 6 ILE A 227 SER A 230 -1 N ARG A 228 O GLU A 237 SHEET 1 C 2 TYR A 170 MSE A 171 0 SHEET 2 C 2 THR A 174 ASP A 175 -1 O THR A 174 N MSE A 171 SHEET 1 D 2 VAL A 295 THR A 297 0 SHEET 2 D 2 ARG A 304 PRO A 306 -1 O ARG A 305 N ILE A 296 SHEET 1 E 3 ASP B 29 LEU B 30 0 SHEET 2 E 3 LEU B 14 ASN B 24 -1 N ASN B 24 O ASP B 29 SHEET 3 E 3 GLU B 93 CYS B 95 -1 O CYS B 95 N GLN B 21 SHEET 1 F 6 GLU B 49 LYS B 51 0 SHEET 2 F 6 MSE B 58 ALA B 62 -1 O GLU B 60 N LYS B 51 SHEET 3 F 6 LEU B 14 ASN B 24 -1 N MSE B 20 O LEU B 59 SHEET 4 F 6 GLY B 134 GLY B 140 -1 O HIS B 138 N GLY B 15 SHEET 5 F 6 THR B 235 ASP B 242 -1 O VAL B 238 N VAL B 137 SHEET 6 F 6 ILE B 227 SER B 230 -1 N SER B 230 O THR B 235 SHEET 1 G 2 TYR B 170 MSE B 171 0 SHEET 2 G 2 THR B 174 ASP B 175 -1 O THR B 174 N MSE B 171 SHEET 1 H 2 VAL B 295 THR B 297 0 SHEET 2 H 2 ARG B 304 PRO B 306 -1 O ARG B 305 N ILE B 296
LINK C GLU A 19 N MSE A 20 1555 1555 1.33 LINK C MSE A 20 N GLN A 21 1555 1555 1.33 LINK C SER A 35 N MSE A 36 1555 1555 1.33 LINK C MSE A 36 N LEU A 37 1555 1555 1.33 LINK C SER A 57 N MSE A 58 1555 1555 1.33 LINK C MSE A 58 N LEU A 59 1555 1555 1.33 LINK C ALA A 78 N MSE A 79 1555 1555 1.33 LINK C MSE A 79 N GLN A 80 1555 1555 1.33 LINK C TYR A 170 N MSE A 171 1555 1555 1.33 LINK C MSE A 171 N GLN A 172 1555 1555 1.33 LINK C PRO A 194 N MSE A 195 1555 1555 1.32 LINK C MSE A 195 N PRO A 196 1555 1555 1.33 LINK C THR A 215 N MSE A 216 1555 1555 1.32 LINK C MSE A 216 N ILE A 217 1555 1555 1.33 LINK C VAL A 240 N MSE A 241 1555 1555 1.33 LINK C MSE A 241 N ASP A 242 1555 1555 1.33 LINK C ASN A 252 N MSE A 253 1555 1555 1.33 LINK C MSE A 253 N ALA A 254 1555 1555 1.33 LINK C LEU A 347 N MSE A 348 1555 1555 1.33 LINK C MSE A 348 N ARG A 349 1555 1555 1.33 LINK C GLU B 19 N MSE B 20 1555 1555 1.33 LINK C MSE B 20 N GLN B 21 1555 1555 1.33 LINK C SER B 35 N MSE B 36 1555 1555 1.33 LINK C MSE B 36 N LEU B 37 1555 1555 1.32 LINK C SER B 57 N MSE B 58 1555 1555 1.33 LINK C MSE B 58 N LEU B 59 1555 1555 1.32 LINK C ALA B 78 N MSE B 79 1555 1555 1.33 LINK C MSE B 79 N GLN B 80 1555 1555 1.33 LINK C TYR B 170 N MSE B 171 1555 1555 1.33 LINK C MSE B 171 N GLN B 172 1555 1555 1.33 LINK C PRO B 194 N MSE B 195 1555 1555 1.33 LINK C MSE B 195 N PRO B 196 1555 1555 1.34 LINK C THR B 215 N MSE B 216 1555 1555 1.33 LINK C MSE B 216 N ILE B 217 1555 1555 1.33 LINK C VAL B 240 N MSE B 241 1555 1555 1.32 LINK C MSE B 241 N ASP B 242 1555 1555 1.33 LINK C ASN B 252 N MSE B 253 1555 1555 1.33 LINK C MSE B 253 N ALA B 254 1555 1555 1.33 LINK C LEU B 347 N MSE B 348 1555 1555 1.33 LINK C MSE B 348 N ARG B 349 1555 1555 1.33
CISPEP 1 PRO A 25 PRO A 26 0 -0.08 CISPEP 2 PRO B 25 PRO B 26 0 0.00
CRYST1 49.470 100.320 71.370 90.00 99.94 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.020214 0.000000 0.003542 0.00000
SCALE2 0.000000 0.009968 0.000000 0.00000
SCALE3 0.000000 0.000000 0.014225 0.00000