1R7G - Header Asymmetric Unit

HEADER MEMBRANE PROTEIN 21-OCT-03 1R7G

TITLE NMR STRUCTURE OF THE MEMBRANE ANCHOR DOMAIN (1-31) OF THE TITLE 2 NONSTRUCTURAL PROTEIN 5A (NS5A) OF HEPATITIS C VIRUS TITLE 3 (MINIMIZED AVERAGE STRUCTURE, SAMPLE IN 100MM DPC)

COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENOME POLYPROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NONSTRUCTURAL PROTEIN NS5A (P56)(RESIDUES 1973- COMPND 5 2003 OF SWISS-PROT SEQUENCE P27958); COMPND 6 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SOURCE 4 SEQUENCE IS NATURALLY FOUND IN HEPATITIS C VIRUS.

KEYWDS MEMBRANE ANCHOR DOMAIN, HCV NS5A PROTEIN, NMR STRUCTURE, KEYWDS 2 PEPTIDE., MEMBRANE PROTEIN

EXPDTA SOLUTION NMR

MDLTYP MINIMIZED AVERAGE

AUTHOR F.PENIN,V.BRASS,N.APPEL,S.RAMBOARINA,R.MONTSERRET,D.FICHEUX, AUTHOR 2 H.E.BLUM,R.BARTENSCHLAGER,D.MORADPOUR

REVDAT 4 24-FEB-09 1R7G 1 VERSN REVDAT 3 28-SEP-04 1R7G 1 JRNL REVDAT 2 07-SEP-04 1R7G 1 JRNL REVDAT 1 10-AUG-04 1R7G 0

JRNL AUTH F.PENIN,V.BRASS,N.APPEL,S.RAMBOARINA,R.MONTSERRET, JRNL AUTH 2 D.FICHEUX,H.E.BLUM,R.BARTENSCHLAGER,D.MORADPOUR JRNL TITL STRUCTURE AND FUNCTION OF THE MEMBRANE ANCHOR JRNL TITL 2 DOMAIN OF HEPATITIS C VIRUS NONSTRUCTURAL PROTEIN JRNL TITL 3 5A. JRNL REF J.BIOL.CHEM. V. 279 40835 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15247283 JRNL DOI 10.1074/JBC.M404761200

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.85 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 1R7G COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-03. REMARK 100 THE RCSB ID CODE IS RCSB020530.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2MM NS5A[1-31], 10MM DTTD10 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 2D TOCSY, DQF-COSY, REMARK 210 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1, X-PLOR 3.85 REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED REMARK 210 ANNEALING, MOLECULAR DYNAMICS, REMARK 210 ENERGY MINIMIZATION REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 26 -115.42 -89.49 REMARK 500 LEU A 27 -167.36 59.88 REMARK 500 MET A 28 73.98 50.70 REMARK 500 GLN A 30 -67.22 -140.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 6 0.28 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1R7C RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE MEMBRANE ANCHOR DOMAIN (1-31) OF THE REMARK 900 NONSTRUCTURAL PROTEIN 5A (NS5A) OF HEPATITIS C VIRUS. REMARK 900 (MINIMIZED AVERAGE STRUCTURE, SAMPLE IN 50% TFE) REMARK 900 RELATED ID: 1R7D RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE MEMBRANE ANCHOR DOMAIN (1-31) OF THE REMARK 900 NONSTRUCTURAL PROTEIN 5A (NS5A) OF HEPATITIS C VIRUS. REMARK 900 (ENSEMBLE OF 51 STRUCTURES, SAMPLE IN 50% TFE) REMARK 900 RELATED ID: 1R7E RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE MEMBRANE ANCHOR DOMAIN (1-31) OF THE REMARK 900 NONSTRUCTURAL PROTEIN 5A (NS5A) OF HEPATITIS C VIRUS. REMARK 900 (MINIMIZED AVERAGE STRUCTURE, SAMPLE IN 100MM SDS.) REMARK 900 RELATED ID: 1R7F RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE MEMBRANE ANCHOR DOMAIN (1-31) OF THE REMARK 900 NONSTRUCTURAL PROTEIN 5A (NS5A) OF HEPATITIS C VIRUS. REMARK 900 (ENSEMBLE OF 43 STRUCTURES, SAMPLE IN 100MM SDS.)

DBREF 1R7G A 1 31 UNP P27958 POLG_HCVH 1973 2003

SEQRES 1 A 31 SER GLY SER TRP LEU ARG ASP ILE TRP ASP TRP ILE CYS SEQRES 2 A 31 GLU VAL LEU SER ASP PHE LYS THR TRP LEU LYS ALA LYS SEQRES 3 A 31 LEU MET PRO GLN LEU

HELIX 1 1 SER A 3 LYS A 26 1 24

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000