10 20 30 40 50 60 70 80 1R6H - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 15-OCT-03 1R6H
TITLE SOLUTION STRUCTURE OF HUMAN PRL-3
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN TYROSINE PHOSPHATASE TYPE IVA, MEMBER 3 COMPND 3 ISOFORM 1; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: PRL-3 PHOSPHATASE; COMPND 6 EC: 3.1.3.48; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B
KEYWDS DUAL SPECIFICITY PHOSPHATASE FOLD, HYDROLASE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR G.KOZLOV,K.GEHRING,I.EKIEL
REVDAT 3 24-FEB-09 1R6H 1 VERSN REVDAT 2 23-MAR-04 1R6H 1 JRNL REVDAT 1 13-JAN-04 1R6H 0
JRNL AUTH G.KOZLOV,J.CHENG,E.ZIOMEK,D.BANVILLE,K.GEHRING, JRNL AUTH 2 I.EKIEL JRNL TITL STRUCTURAL INSIGHTS INTO MOLECULAR FUNCTION OF THE JRNL TITL 2 METASTASIS-ASSOCIATED PHOSPHATASE PRL-3. JRNL REF J.BIOL.CHEM. V. 279 11882 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 14704153 JRNL DOI 10.1074/JBC.M312905200
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL REMARK 3 OF 2320 RESTRAINTS, 1969 ARE NOE-DERIVED DISTANCE CONSTRAINTS, REMARK 3 275 DIHEDRAL ANGLE RESTRAINTS, 76 DISTANCE RESTRAINTS FROM REMARK 3 HYDROGEN BONDS
REMARK 4 REMARK 4 1R6H COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-03. REMARK 100 THE RCSB ID CODE IS RCSB020495.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 0.1M NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 3MM PRL-3 U-15N, 50MM REMARK 210 PHOSPHATE BUFFER, 0.1M NACL, REMARK 210 10MM DTT, 0.1MM NAN3, 90% H2O, REMARK 210 10% D2O; 3MM PRL-3 U-15N,13C, REMARK 210 50MM PHOSPHATE BUFFER, 0.1M REMARK 210 NACL, 10MM DTT, 0.1MM NAN3, REMARK 210 90% H2O, 10% D2O; 3MM PRL-3, REMARK 210 50MM PHOSPHATE BUFFER, 0.1M REMARK 210 NACL, 10MM DTT, 0.1MM NAN3, REMARK 210 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, HNHA, REMARK 210 3D_13C-SEPARATED_NOESY, 2D REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX, INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER, VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.1, GIFA 4.31, ARIA REMARK 210 1.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 60 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING STANDARD TRIPLE- REMARK 210 RESONANCE NMR SPECTROSCOPY
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 3 35.86 -142.26 REMARK 500 1 MET A 7 157.42 60.74 REMARK 500 1 LYS A 18 -88.76 65.93 REMARK 500 1 PRO A 78 108.13 -59.98 REMARK 500 1 SER A 101 -164.45 -101.08 REMARK 500 1 MET A 127 76.92 -62.90 REMARK 500 1 ASN A 145 -78.09 -114.03 REMARK 500 1 SER A 146 -61.23 -101.32 REMARK 500 1 ARG A 162 40.45 -96.23 REMARK 500 1 THR A 171 -52.28 -143.17 REMARK 500 2 LYS A 18 -86.62 55.06 REMARK 500 2 PRO A 78 97.10 -40.16 REMARK 500 2 PRO A 80 151.72 -47.67 REMARK 500 2 SER A 101 -165.10 -101.21 REMARK 500 2 MET A 127 78.67 -62.53 REMARK 500 2 ASN A 145 -77.32 -113.89 REMARK 500 2 SER A 146 -60.68 -100.67 REMARK 500 2 PHE A 163 -56.01 -120.88 REMARK 500 2 LYS A 164 110.98 59.29 REMARK 500 3 ASN A 8 -73.08 -82.00 REMARK 500 3 PRO A 10 96.58 -52.49 REMARK 500 3 LYS A 18 -97.81 51.08 REMARK 500 3 PRO A 78 99.39 -43.32 REMARK 500 3 PRO A 80 153.97 -47.46 REMARK 500 3 SER A 101 -163.85 -101.23 REMARK 500 3 MET A 127 71.18 -63.20 REMARK 500 3 ASN A 145 -76.87 -113.25 REMARK 500 3 SER A 146 -61.01 -99.60 REMARK 500 3 PHE A 163 -66.33 -108.90 REMARK 500 3 HIS A 167 37.93 -177.60 REMARK 500 3 LYS A 170 -47.38 -148.46 REMARK 500 3 THR A 171 -62.08 -120.39 REMARK 500 4 ARG A 6 -65.92 -132.20 REMARK 500 4 ASN A 8 31.86 -163.75 REMARK 500 4 ARG A 9 112.34 -175.89 REMARK 500 4 PRO A 10 109.85 -50.30 REMARK 500 4 LYS A 18 -78.47 44.71 REMARK 500 4 ASP A 74 -175.62 178.85 REMARK 500 4 PRO A 78 101.00 -47.02 REMARK 500 4 SER A 101 -161.80 -101.05 REMARK 500 4 MET A 127 72.25 -63.55 REMARK 500 4 ASN A 145 -76.72 -113.13 REMARK 500 4 SER A 146 -60.71 -99.75 REMARK 500 5 MET A 4 -60.93 -150.07 REMARK 500 5 PRO A 10 90.94 -69.16 REMARK 500 5 LYS A 18 -90.73 64.59 REMARK 500 5 PRO A 78 101.89 -49.71 REMARK 500 5 MET A 127 78.39 -63.42 REMARK 500 5 ASN A 145 -77.38 -113.66 REMARK 500 5 SER A 146 -60.80 -100.49 REMARK 500 5 LYS A 170 -53.34 -139.90 REMARK 500 5 THR A 171 -48.26 -151.28 REMARK 500 6 HIS A 3 -64.31 -91.90 REMARK 500 6 MET A 4 92.49 60.55 REMARK 500 6 PRO A 10 98.36 -67.63 REMARK 500 6 LYS A 18 -93.16 45.70 REMARK 500 6 THR A 46 -169.77 -164.90 REMARK 500 6 PRO A 72 -163.69 -107.96 REMARK 500 6 ASP A 74 -99.57 -176.97 REMARK 500 6 MET A 127 74.19 -63.12 REMARK 500 6 ASN A 145 -76.50 -113.13 REMARK 500 6 SER A 146 -60.84 -99.63 REMARK 500 6 PHE A 163 -62.80 -101.09 REMARK 500 7 SER A 2 90.06 -162.67 REMARK 500 7 MET A 4 -47.63 -148.35 REMARK 500 7 LYS A 18 -87.85 77.92 REMARK 500 7 THR A 46 -169.93 -165.19 REMARK 500 7 ASP A 74 -164.65 176.16 REMARK 500 7 SER A 101 -164.77 -101.00 REMARK 500 7 MET A 127 72.61 -64.00 REMARK 500 7 ASN A 145 -76.71 -112.88 REMARK 500 7 SER A 146 -60.79 -99.77 REMARK 500 7 ARG A 162 -169.49 -108.42 REMARK 500 7 LYS A 164 164.53 60.08 REMARK 500 7 LYS A 170 89.12 -160.52 REMARK 500 8 LYS A 18 -88.52 84.12 REMARK 500 8 THR A 46 -170.00 -164.90 REMARK 500 8 SER A 101 -163.46 -101.30 REMARK 500 8 CYS A 107 98.36 -69.00 REMARK 500 8 ALA A 109 -8.62 -59.42 REMARK 500 8 MET A 127 73.61 -63.03 REMARK 500 8 ASN A 145 -77.74 -113.87 REMARK 500 8 SER A 146 -60.95 -101.13 REMARK 500 9 ARG A 9 104.16 -167.97 REMARK 500 9 LYS A 18 -96.08 43.63 REMARK 500 9 THR A 46 -169.93 -165.25 REMARK 500 9 PRO A 78 102.66 -50.93 REMARK 500 9 PRO A 80 154.16 -48.72 REMARK 500 9 SER A 101 -83.74 -81.44 REMARK 500 9 MET A 127 79.73 -62.45 REMARK 500 9 ASN A 145 -77.09 -113.45 REMARK 500 9 SER A 146 -60.70 -100.27 REMARK 500 9 PRO A 166 176.80 -52.69 REMARK 500 9 LYS A 170 -47.31 -138.80 REMARK 500 10 ASN A 8 -63.25 -136.13 REMARK 500 10 LYS A 18 -103.49 64.08 REMARK 500 10 PRO A 79 70.89 -100.28 REMARK 500 10 ALA A 109 -8.37 -59.16 REMARK 500 10 MET A 127 79.14 -62.97 REMARK 500 10 ASN A 145 -77.52 -113.65 REMARK 500 10 SER A 146 -61.41 -100.48 REMARK 500 11 ARG A 6 -61.07 -149.85 REMARK 500 11 MET A 7 -64.74 -169.30 REMARK 500 11 ASN A 8 114.06 -162.06 REMARK 500 11 LYS A 18 -100.24 59.04 REMARK 500 11 ASP A 74 -161.61 175.50 REMARK 500 11 PRO A 78 106.10 -55.31 REMARK 500 11 PRO A 80 154.09 -47.56 REMARK 500 11 SER A 101 -169.98 -101.20 REMARK 500 11 MET A 127 71.92 -63.87 REMARK 500 11 ASN A 145 -76.62 -112.95 REMARK 500 11 SER A 146 -60.93 -99.91 REMARK 500 11 HIS A 167 -54.03 -171.56 REMARK 500 12 HIS A 3 -58.55 -153.20 REMARK 500 12 ARG A 6 -47.36 -140.66 REMARK 500 12 LYS A 18 -95.77 64.28 REMARK 500 12 THR A 46 -169.69 -165.19 REMARK 500 12 PRO A 78 107.27 -59.17 REMARK 500 12 PRO A 80 154.03 -47.62 REMARK 500 12 SER A 101 -168.50 -101.22 REMARK 500 12 MET A 127 73.30 -62.61 REMARK 500 12 ASN A 145 -76.65 -113.14 REMARK 500 12 SER A 146 -60.74 -99.78 REMARK 500 12 HIS A 167 94.41 55.90 REMARK 500 12 HIS A 169 -51.19 -155.15 REMARK 500 12 LYS A 170 92.26 59.94 REMARK 500 13 HIS A 3 145.25 -174.06 REMARK 500 13 MET A 4 -39.18 -177.48 REMARK 500 13 ALA A 5 99.69 -163.30 REMARK 500 13 PRO A 10 66.32 -68.10 REMARK 500 13 LYS A 18 -103.79 48.64 REMARK 500 13 PRO A 78 105.41 -56.52 REMARK 500 13 SER A 101 -164.77 -101.21 REMARK 500 13 MET A 127 76.65 -62.48 REMARK 500 13 ASN A 145 -76.80 -113.62 REMARK 500 13 SER A 146 -60.87 -99.90 REMARK 500 13 THR A 168 -44.70 -160.94 REMARK 500 13 HIS A 169 155.29 62.35 REMARK 500 13 THR A 171 98.20 -67.00 REMARK 500 14 ARG A 6 -50.50 -126.28 REMARK 500 14 ASN A 8 -46.26 -167.51 REMARK 500 14 LYS A 18 -83.50 62.90 REMARK 500 14 THR A 46 -169.67 -165.20 REMARK 500 14 PRO A 79 55.87 -102.76 REMARK 500 14 SER A 101 -163.08 -101.03 REMARK 500 14 MET A 127 73.06 -63.17 REMARK 500 14 ASN A 145 -76.55 -112.63 REMARK 500 14 SER A 146 -60.78 -99.67 REMARK 500 14 HIS A 167 -65.55 -167.15 REMARK 500 14 HIS A 169 -47.54 -134.59 REMARK 500 15 LYS A 18 -103.59 61.97 REMARK 500 15 THR A 46 -169.38 -165.22 REMARK 500 15 MET A 127 66.47 -63.16 REMARK 500 15 ALA A 143 99.16 -67.23 REMARK 500 15 ASN A 145 -76.88 -113.55 REMARK 500 15 SER A 146 -60.61 -100.06 REMARK 500 15 ARG A 162 -169.62 -109.76 REMARK 500 15 HIS A 167 152.52 61.72 REMARK 500 15 LYS A 170 106.11 60.69 REMARK 500 15 THR A 171 -64.69 -101.90 REMARK 500 16 MET A 4 168.79 60.64 REMARK 500 16 LYS A 18 -92.47 63.46 REMARK 500 16 ASP A 74 -165.39 -108.74 REMARK 500 16 CYS A 107 98.79 -68.01 REMARK 500 16 MET A 127 77.78 -62.49 REMARK 500 16 ASN A 145 -76.98 -113.67 REMARK 500 16 SER A 146 -60.69 -100.23 REMARK 500 16 LYS A 170 97.21 -170.73 REMARK 500 17 HIS A 3 -62.52 -97.23 REMARK 500 17 ALA A 5 -55.37 -167.99 REMARK 500 17 ARG A 9 80.71 -161.47 REMARK 500 17 LYS A 18 -95.99 50.09 REMARK 500 17 ASP A 74 -167.29 -178.11 REMARK 500 17 PRO A 78 102.16 -50.68 REMARK 500 17 PRO A 99 -166.75 -65.58 REMARK 500 17 SER A 101 -160.72 -101.10 REMARK 500 17 MET A 127 79.56 -62.42 REMARK 500 17 ASN A 145 -76.32 -113.16 REMARK 500 17 SER A 146 -60.51 -99.75 REMARK 500 17 LYS A 164 120.48 62.85 REMARK 500 17 LYS A 170 -65.01 -149.63 REMARK 500 18 ARG A 6 -68.08 -132.17 REMARK 500 18 LYS A 18 -87.67 84.40 REMARK 500 18 SER A 101 -163.70 -101.10 REMARK 500 18 MET A 127 71.85 -63.84 REMARK 500 18 ASN A 145 -76.71 -113.32 REMARK 500 18 SER A 146 -60.95 -99.65 REMARK 500 18 HIS A 169 -63.77 -135.99 REMARK 500 19 MET A 7 -46.87 -134.34 REMARK 500 19 LYS A 18 -82.40 65.88 REMARK 500 19 PRO A 78 101.20 -43.53 REMARK 500 19 SER A 101 -164.75 -101.13 REMARK 500 19 MET A 127 75.48 -62.67 REMARK 500 19 ASN A 145 -76.64 -113.20 REMARK 500 19 SER A 146 -61.10 -99.80 REMARK 500 19 ARG A 162 -76.59 -82.02 REMARK 500 19 LYS A 164 110.95 -176.28 REMARK 500 19 PRO A 166 -177.74 -52.77 REMARK 500 19 HIS A 167 -45.93 -159.63 REMARK 500 20 MET A 4 -46.95 -152.09 REMARK 500 20 MET A 7 -47.31 -151.80 REMARK 500 20 LYS A 18 -100.65 48.92 REMARK 500 20 THR A 46 -169.12 -165.42 REMARK 500 20 PRO A 78 98.43 -41.57 REMARK 500 20 MET A 127 75.12 -62.56 REMARK 500 20 ASN A 145 -76.59 -113.22 REMARK 500 20 SER A 146 -60.62 -99.77 REMARK 500 20 HIS A 167 -65.84 -152.15 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1R6H A 4 172 UNP O75365 TP4A3_HUMAN 1 169
SEQADV 1R6H GLY A 1 UNP O75365 CLONING ARTIFACT SEQADV 1R6H SER A 2 UNP O75365 CLONING ARTIFACT SEQADV 1R6H HIS A 3 UNP O75365 CLONING ARTIFACT
SEQRES 1 A 172 GLY SER HIS MET ALA ARG MET ASN ARG PRO ALA PRO VAL SEQRES 2 A 172 GLU VAL SER TYR LYS HIS MET ARG PHE LEU ILE THR HIS SEQRES 3 A 172 ASN PRO THR ASN ALA THR LEU SER THR PHE ILE GLU ASP SEQRES 4 A 172 LEU LYS LYS TYR GLY ALA THR THR VAL VAL ARG VAL CYS SEQRES 5 A 172 GLU VAL THR TYR ASP LYS THR PRO LEU GLU LYS ASP GLY SEQRES 6 A 172 ILE THR VAL VAL ASP TRP PRO PHE ASP ASP GLY ALA PRO SEQRES 7 A 172 PRO PRO GLY LYS VAL VAL GLU ASP TRP LEU SER LEU VAL SEQRES 8 A 172 LYS ALA LYS PHE CYS GLU ALA PRO GLY SER CYS VAL ALA SEQRES 9 A 172 VAL HIS CYS VAL ALA GLY LEU GLY ARG ALA PRO VAL LEU SEQRES 10 A 172 VAL ALA LEU ALA LEU ILE GLU SER GLY MET LYS TYR GLU SEQRES 11 A 172 ASP ALA ILE GLN PHE ILE ARG GLN LYS ARG ARG GLY ALA SEQRES 12 A 172 ILE ASN SER LYS GLN LEU THR TYR LEU GLU LYS TYR ARG SEQRES 13 A 172 PRO LYS GLN ARG LEU ARG PHE LYS ASP PRO HIS THR HIS SEQRES 14 A 172 LYS THR ARG
HELIX 1 1 THR A 32 GLY A 44 1 13 HELIX 2 2 ASP A 57 GLY A 65 1 9 HELIX 3 3 GLY A 81 ALA A 98 1 18 HELIX 4 4 ARG A 113 ILE A 123 1 11 HELIX 5 5 GLU A 124 GLY A 126 5 3 HELIX 6 6 MET A 127 LYS A 139 1 13 HELIX 7 7 SER A 146 ARG A 156 1 11
SHEET 1 A 5 VAL A 13 TYR A 17 0 SHEET 2 A 5 MET A 20 THR A 25 -1 O ILE A 24 N VAL A 13 SHEET 3 A 5 CYS A 102 HIS A 106 1 O VAL A 105 N THR A 25 SHEET 4 A 5 VAL A 48 VAL A 51 1 N VAL A 49 O ALA A 104 SHEET 5 A 5 VAL A 68 TRP A 71 1 O VAL A 69 N VAL A 48
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000