10 20 30 40 50 60 70 80 1QZ4 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-SEP-03 1QZ4
TITLE STRUCTURE OF YCFC PROTEIN OF UNKNOWN FUNCTION ESCHERICHIA TITLE 2 COLI
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN YCFC; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: YCFC PROTEIN; COMPND 5 SYNONYM: ORF-23; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: YCFC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS STRUCTURAL GENOMICS, HELIX-TURN-HELIX MOTIF, PSI, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, UNKNOWN FUNCTION
EXPDTA X-RAY DIFFRACTION
AUTHOR Z.OTWINOWSKI,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG)
REVDAT 3 24-FEB-09 1QZ4 1 VERSN REVDAT 2 18-JAN-05 1QZ4 1 AUTHOR KEYWDS REMARK REVDAT 1 30-MAR-04 1QZ4 0
JRNL AUTH Z.OTWINOWSKI,D.M.BOREK,Y.CHEN,T.SKARINA, JRNL AUTH 2 A.SAVCHENKO,A.EDWARDS JRNL TITL STRUCTURE OF A HYPOTHETICAL PROTEIN YCFC CODED BY JRNL TITL 2 ESCHERICHIA COLI GENOME. JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 85.2 REMARK 3 NUMBER OF REFLECTIONS : 11138 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 400 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1480 REMARK 3 BIN FREE R VALUE SET COUNT : 0 REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1605 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 111 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.99000 REMARK 3 B22 (A**2) : 0.80000 REMARK 3 B33 (A**2) : 0.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.212 REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.014 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1620 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1543 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2197 ; 1.582 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3567 ; 0.911 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 212 ; 5.268 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 267 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1805 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 302 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 390 ; 0.230 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1704 ; 0.231 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 976 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 82 ; 0.220 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 11 ; 0.367 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 25 ; 0.154 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 66 ; 0.269 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.146 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1054 ; 5.321 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1679 ; 6.470 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 566 ; 7.548 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 518 ; 9.392 ; 3.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): 10 ;11.153 ; 2.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 1QZ4 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-SEP-03. REMARK 100 THE RCSB ID CODE IS RCSB020245.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-AUG-03; 21-JUN-03 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 19-ID; 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999871; 0.91963 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 SI-220; DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR SI-220 REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE; CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11477 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 82.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.8700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 36.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.42300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: BUILD BY WARP/ARP REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, ZINC ACETATE, LITHIUM REMARK 280 ACETATE , VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.55100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.19950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.37450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.19950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.55100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.37450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASN A 41 CG OD1 ND2 REMARK 480 ARG A 148 CG CD NE CZ NH1 NH2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 HIS A 30 O HOH A 311 2.00 REMARK 500 ND1 HIS A 37 O HOH A 350 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 107 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 48 76.30 -119.75 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 316 DISTANCE = 5.24 ANGSTROMS REMARK 525 HOH A 384 DISTANCE = 5.04 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 301 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 12 O REMARK 620 2 CYS A 16 SG 95.9 REMARK 620 3 CYS A 16 N 56.0 75.0 REMARK 620 4 HOH A 384 O 116.8 118.6 166.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 302 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 419 O REMARK 620 2 HIS A 208 ND1 77.5 REMARK 620 3 HIS A 208 NE2 105.1 37.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 303 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 31 N REMARK 620 2 CYS A 31 O 47.9 REMARK 620 3 HOH A 349 O 63.8 100.4 REMARK 620 4 HOH A 363 O 124.6 114.7 72.8 REMARK 620 5 CYS A 31 SG 65.1 87.7 97.7 156.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 304 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 391 O REMARK 620 2 HIS A 27 ND1 89.6 REMARK 620 3 HOH A 399 O 158.1 87.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 305 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 121 OE1 REMARK 620 2 HG A 306 HG 67.0 REMARK 620 3 HOH A 371 O 64.6 42.9 REMARK 620 4 HOH A 377 O 155.1 110.0 131.3 REMARK 620 5 GLU A 121 OE2 37.0 85.5 100.1 119.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 306 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 121 OE1 REMARK 620 2 HOH A 371 O 83.3 REMARK 620 3 HOH A 377 O 80.6 113.9 REMARK 620 4 HIS A 122 NE2 79.7 67.8 159.9 REMARK 620 5 LYS A 3 O 111.7 163.1 77.5 106.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 307 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 186 O REMARK 620 2 HOH A 325 O 52.6 REMARK 620 3 PO4 A 214 O4 114.4 142.4 REMARK 620 4 HOH A 320 O 149.6 102.1 95.9 REMARK 620 5 HIS A 182 ND1 84.1 119.4 89.8 98.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 308 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 31 SG REMARK 620 2 LEU A 21 O 105.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 309 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 118 O REMARK 620 2 HIS A 122 ND1 109.6 REMARK 620 N 1
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 214 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 301 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 302 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 303 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 304 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 305 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 306 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 307 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 308 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 309 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 310
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC70001 RELATED DB: TARGETDB
DBREF 1QZ4 A 2 213 UNP P25746 YCFC_ECOLI 2 213
SEQADV 1QZ4 GLY A 1 UNP P25746 CLONING ARTIFACT
SEQRES 1 A 213 GLY ALA LYS ASN TYR TYR ASP ILE THR LEU ALA LEU ALA SEQRES 2 A 213 GLY ILE CYS GLN SER ALA ARG LEU VAL GLN GLN LEU ALA SEQRES 3 A 213 HIS GLN GLY HIS CYS ASP ALA ASP ALA LEU HIS VAL SER SEQRES 4 A 213 LEU ASN SER ILE ILE ASP MET ASN PRO SER SER THR LEU SEQRES 5 A 213 ALA VAL PHE GLY GLY SER GLU ALA ASN LEU ARG VAL GLY SEQRES 6 A 213 LEU GLU THR LEU LEU GLY VAL LEU ASN ALA SER SER ARG SEQRES 7 A 213 GLN GLY LEU ASN ALA GLU LEU THR ARG TYR THR LEU SER SEQRES 8 A 213 LEU MET VAL LEU GLU ARG LYS LEU SER SER ALA LYS GLY SEQRES 9 A 213 ALA LEU ASP THR LEU GLY ASN ARG ILE ASN GLY LEU GLN SEQRES 10 A 213 ARG GLN LEU GLU HIS PHE ASP LEU GLN SER GLU THR LEU SEQRES 11 A 213 MET SER ALA MET ALA ALA ILE TYR VAL ASP VAL ILE SER SEQRES 12 A 213 PRO LEU GLY PRO ARG ILE GLN VAL THR GLY SER PRO ALA SEQRES 13 A 213 VAL LEU GLN SER PRO GLN VAL GLN ALA LYS VAL ARG ALA SEQRES 14 A 213 THR LEU LEU ALA GLY ILE ARG ALA ALA VAL LEU TRP HIS SEQRES 15 A 213 GLN VAL GLY GLY GLY ARG LEU GLN LEU MET PHE SER ARG SEQRES 16 A 213 ASN ARG LEU THR THR GLN ALA LYS GLN ILE LEU ALA HIS SEQRES 17 A 213 LEU THR PRO GLU LEU
HET PO4 A 214 5 HET HG A 301 1 HET HG A 302 1 HET HG A 303 1 HET HG A 304 1 HET HG A 305 1 HET HG A 306 1 HET HG A 307 1 HET HG A 308 1 HET HG A 309 1 HET HG A 310 1
HETNAM PO4 PHOSPHATE ION HETNAM HG MERCURY (II) ION
FORMUL 2 PO4 O4 P 3- FORMUL 3 HG 10(HG 2+) FORMUL 13 HOH *111(H2 O)
HELIX 1 1 ASN A 4 GLY A 29 1 26 HELIX 2 2 ASP A 32 ASP A 45 1 14 HELIX 3 3 SER A 50 PHE A 55 1 6 HELIX 4 4 SER A 58 ASN A 61 5 4 HELIX 5 5 LEU A 62 ALA A 75 1 14 HELIX 6 6 GLN A 79 ALA A 102 1 24 HELIX 7 7 GLY A 104 GLY A 115 1 12 HELIX 8 8 LEU A 116 GLU A 121 1 6 HELIX 9 9 SER A 127 ILE A 142 1 16 HELIX 10 10 SER A 143 GLY A 146 5 4 HELIX 11 11 ALA A 156 GLN A 159 5 4 HELIX 12 12 SER A 160 VAL A 184 1 25 HELIX 13 13 GLY A 187 SER A 194 1 8 HELIX 14 14 SER A 194 LEU A 209 1 16
LINK HG HG A 301 O LEU A 12 1555 1555 3.23 LINK HG HG A 301 SG CYS A 16 1555 1555 2.07 LINK HG HG A 301 N CYS A 16 1555 1555 3.37 LINK HG HG A 301 O HOH A 384 1555 1555 2.97 LINK HG HG A 302 O HOH A 419 1555 1555 3.20 LINK HG HG A 302 ND1 HIS A 208 1555 1555 3.30 LINK HG HG A 302 NE2 HIS A 208 1555 1555 3.33 LINK HG HG A 303 N CYS A 31 1555 1555 3.51 LINK HG HG A 303 O CYS A 31 1555 1555 3.17 LINK HG HG A 303 O HOH A 349 1555 1555 2.33 LINK HG HG A 303 O HOH A 363 1555 1555 2.38 LINK HG HG A 303 SG CYS A 31 1555 1555 2.26 LINK HG HG A 304 O HOH A 391 1555 1555 1.86 LINK HG HG A 304 ND1 HIS A 27 1555 1555 2.34 LINK HG HG A 304 O HOH A 399 1555 1555 1.76 LINK HG HG A 305 OE1 GLU A 121 1555 1555 2.18 LINK HG HG A 305 HG HG A 306 1555 1555 2.24 LINK HG HG A 305 O HOH A 371 1555 1555 3.46 LINK HG HG A 305 O HOH A 377 1555 1555 1.55 LINK HG HG A 305 OE2 GLU A 121 1555 1555 3.51 LINK HG HG A 306 OE1 GLU A 121 1555 1555 2.44 LINK HG HG A 306 O HOH A 371 1555 1555 2.37 LINK HG HG A 306 O HOH A 377 1555 1555 3.13 LINK HG HG A 306 NE2 HIS A 122 1555 1555 2.39 LINK HG HG A 307 O GLY A 186 1555 1555 2.90 LINK HG HG A 307 O HOH A 325 1555 1555 2.83 LINK HG HG A 307 O4 PO4 A 214 1555 1555 2.84 LINK HG HG A 307 O HOH A 320 1555 1555 2.24 LINK HG HG A 307 ND1 HIS A 182 1555 1555 2.19 LINK HG HG A 308 SG CYS A 31 1555 1555 2.01 LINK HG HG A 308 O LEU A 21 1555 1555 3.43 LINK HG HG A 309 O ARG A 118 1555 1555 2.83 LINK HG HG A 309 ND1 HIS A 122 1555 1555 2.56 LINK HG HG A 310 O LEU A 172 1555 1555 3.38 LINK HG HG A 306 O LYS A 3 1555 3655 3.07
SITE 1 AC1 6 ARG A 97 HIS A 182 ARG A 188 HG A 307 SITE 2 AC1 6 HOH A 340 HOH A 414 SITE 1 AC2 4 LEU A 12 CYS A 16 THR A 89 HOH A 384 SITE 1 AC3 2 GLY A 110 HIS A 208 SITE 1 AC4 4 CYS A 31 LEU A 36 HOH A 349 HOH A 363 SITE 1 AC5 3 HIS A 27 HOH A 391 HOH A 399 SITE 1 AC6 4 TYR A 5 GLU A 121 HG A 306 HOH A 377 SITE 1 AC7 5 LYS A 3 GLU A 121 HIS A 122 HG A 305 SITE 2 AC7 5 HOH A 371 SITE 1 AC8 5 HIS A 182 GLY A 186 PO4 A 214 HOH A 320 SITE 2 AC8 5 HOH A 325 SITE 1 AC9 3 LEU A 21 LEU A 25 CYS A 31 SITE 1 BC1 2 ARG A 118 HIS A 122 SITE 1 BC2 3 LEU A 109 LEU A 172 ARG A 176
CRYST1 43.102 62.749 68.399 90.00 90.00 90.00 P 21 21 21 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.023201 0.000000 0.000000 0.00000
SCALE2 0.000000 0.015937 0.000000 0.00000
SCALE3 0.000000 0.000000 0.014620 0.00000