10 20 30 40 50 60 70 80 1QNK - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER CHEMOKINE 18-OCT-99 1QNK
TITLE TRUNCATED HUMAN GROB[5-73], NMR, 20 STRUCTURES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GROB[5-73]; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 STRAIN: (LW 14); SOURCE 6 CELLULAR_LOCATION: BLOOD; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: (LW 14)
KEYWDS CHEMOKINE, CHEMOKINE 15-O, HUMAN CHEMOKINE GROB[5-73], CXC KEYWDS 2 CHEMOKINE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR Y.Q.QIAN,K.JOHANSON,P.MCDEVITT
REVDAT 2 24-FEB-09 1QNK 1 VERSN REVDAT 1 04-FEB-00 1QNK 0
JRNL AUTH Y.Q.QIAN,K.JOHANSON,P.MCDEVITT JRNL TITL NUCLEAR MAGNETIC RESONANCE SOLUTION STRUCTURE OF JRNL TITL 2 TRUNCATED HUMAN GROBETA [5-73] AND ITS STRUCTURAL JRNL TITL 3 COMPARISON WITH CXC CHEMOKINE FAMILY MEMBERS JRNL TITL 4 GROALPHA AND IL-8. JRNL REF J.MOL.BIOL. V. 294 1065 1999 JRNL REFN ISSN 0022-2836 JRNL PMID 10600366 JRNL DOI 10.1006/JMBI.1999.3333
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.KING,R.SCOTT,D.WU,J.STRICKLER,D.MCNULTY,M.SCOTT REMARK 1 TITL CHARACTERIZATION AND PURIFICATION OF A STROMAL REMARK 1 TITL 2 CELL DERIVED HEMATOPOIETIC SYNERGISTIC FACTOR REMARK 1 TITL 3 INDUCED BY A NOVEL HEMATOREGULATORY COMPOUND, SK&F REMARK 1 TITL 4 107647 REMARK 1 REF BLOOD V. 86 310A 1995 REMARK 1 REFN ISSN 0006-4971
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROGRAM FOR NMR OR THEORETICAL MODELING MODELING REMARK 3 AUTHORS : JONES,ZOU,COWAN,KJELDGAARD REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1QNK COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-OCT-99. REMARK 100 THE PDBE ID CODE IS EBI-4297.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 90%H2O/10%D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D REMARK 210 SPECTROMETER FIELD STRENGTH : 600 REMARK 210 SPECTROMETER MODEL : UNITY+ REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: SEE JRNL ARTICLE FOR DETAILS REMARK 210 REMARK 210 THREE-DIMENSIONAL STRUCTURE IN AQUEOUS SOLUTION REPRESENTED REMARK 210 BY 20 CONFORMERS DETERMINED BY NUCLEAR MAGNETIC RESONANCE, REMARK 210 TORSION ANGLE DYNAMICS AND RESTRAINED ENERGY REFINEMENT. REMARK 210 DATA WERE COLLECTED AT 30 DEGREES CELSIUS AND AT PH 5.5. REMARK 210 THEY CONSIST OF 1878 UPPER LIMITS ON DISTANCES OBTAINED REMARK 210 FROM NOE MEASUREMENTS AND 314 ANGLE CONSTRAINTS OBTAINED REMARK 210 FROM NOE MEASUREMENTS AND COUPLING CONSTANT MEASUREMENTS. REMARK 210 THERE INPUT DATA ARE ALSO AVAILABLE FROM THE PROTEIN DATA REMARK 210 BANK. REMARK 210 REMARK 210 TORSION ANGLE DYNAMICS CALCULATIONS WERE PERFORMED WITH THE REMARK 210 PROGRAM DYANA REMARK 210 (P.GUNTERT, C.MUMENTHALER, K.WUTHRICH, J.MOL.BIOL. (1997) REMARK 210 VOL. 273, 283-298).
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL A 26 - H VAL B 28 1.49 REMARK 500 H VAL A 28 - O VAL B 26 1.51 REMARK 500 H LEU A 44 - O GLN A 48 1.48 REMARK 500 O LYS B 27 - H ILE B 41 1.59 REMARK 500 H LEU B 44 - O GLN B 48 1.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 8 -144.23 -135.42 REMARK 500 1 SER A 30 173.72 -48.29 REMARK 500 1 PRO A 54 48.49 -74.99 REMARK 500 1 ALA A 55 29.60 -164.49 REMARK 500 1 SER A 72 88.16 -177.57 REMARK 500 1 ARG B 8 -145.57 -134.40 REMARK 500 1 SER B 30 173.51 -46.71 REMARK 500 1 SER B 72 88.18 -170.65 REMARK 500 2 ARG A 8 -145.01 -135.11 REMARK 500 2 SER A 30 170.66 -45.44 REMARK 500 2 GLU A 39 83.04 -155.90 REMARK 500 2 LYS A 71 -73.29 -79.25 REMARK 500 2 SER A 72 68.90 -170.13 REMARK 500 2 ARG B 8 -144.43 -136.06 REMARK 500 2 SER B 30 171.13 -56.01 REMARK 500 2 SER B 72 -60.52 -176.10 REMARK 500 3 ARG A 8 -143.60 -135.81 REMARK 500 3 SER A 30 171.13 -47.32 REMARK 500 3 PRO A 54 48.17 -75.01 REMARK 500 3 ALA A 55 32.91 -169.93 REMARK 500 3 LYS A 71 -86.59 -94.01 REMARK 500 3 SER A 72 108.33 79.94 REMARK 500 3 ARG B 8 -143.58 -135.36 REMARK 500 3 SER B 30 167.58 -48.84 REMARK 500 3 LYS B 71 -173.37 -68.98 REMARK 500 3 SER B 72 -53.01 80.83 REMARK 500 4 GLU A 6 77.76 -114.97 REMARK 500 4 ARG A 8 -143.37 -135.70 REMARK 500 4 SER A 30 176.57 -48.17 REMARK 500 4 PRO A 54 45.84 -74.96 REMARK 500 4 ALA A 55 25.83 -158.97 REMARK 500 4 SER A 72 -56.46 -175.62 REMARK 500 4 ARG B 8 -142.77 -135.69 REMARK 500 4 LYS B 71 -68.08 -106.11 REMARK 500 4 SER B 72 103.38 -179.85 REMARK 500 5 ARG A 8 -144.78 -136.55 REMARK 500 5 ILE A 18 164.74 55.60 REMARK 500 5 SER A 30 174.84 -53.97 REMARK 500 5 GLU A 39 113.78 -168.91 REMARK 500 5 LYS A 71 -68.37 -154.59 REMARK 500 5 SER A 72 77.34 71.36 REMARK 500 5 ARG B 8 -145.05 -135.47 REMARK 500 5 ILE B 18 164.64 55.45 REMARK 500 5 SER B 30 167.62 -43.63 REMARK 500 6 ARG A 8 -144.75 -136.03 REMARK 500 6 SER A 30 172.43 -46.95 REMARK 500 6 GLU A 39 83.08 -153.80 REMARK 500 6 LYS A 71 -69.33 -149.75 REMARK 500 6 ARG B 8 -143.91 -131.67 REMARK 500 6 LYS B 29 78.42 -118.69 REMARK 500 6 SER B 30 172.37 -46.46 REMARK 500 6 GLU B 39 86.13 -163.98 REMARK 500 6 SER B 72 76.37 -179.62 REMARK 500 7 GLU A 6 75.89 -111.83 REMARK 500 7 ARG A 8 -143.58 -135.05 REMARK 500 7 SER A 30 171.60 -52.89 REMARK 500 7 LYS A 71 -62.88 -140.02 REMARK 500 7 SER A 72 -52.26 -176.81 REMARK 500 7 GLU B 6 56.00 -110.91 REMARK 500 7 ARG B 8 -145.13 -135.32 REMARK 500 7 SER B 30 170.61 -49.14 REMARK 500 7 PRO B 54 48.13 -75.03 REMARK 500 7 ALA B 55 31.82 -167.34 REMARK 500 7 LYS B 71 -55.78 -132.06 REMARK 500 7 SER B 72 84.84 41.55 REMARK 500 8 ARG A 8 -144.54 -135.98 REMARK 500 8 SER A 30 174.76 -50.31 REMARK 500 8 LYS A 71 -67.18 -97.84 REMARK 500 8 SER A 72 -61.96 -176.70 REMARK 500 8 ARG B 8 -142.20 -135.65 REMARK 500 9 ARG A 8 -142.48 -135.50 REMARK 500 9 ILE A 18 164.32 55.63 REMARK 500 9 SER A 72 -59.64 -172.83 REMARK 500 9 GLU B 6 66.36 -106.49 REMARK 500 9 ARG B 8 -144.53 -135.69 REMARK 500 9 SER B 30 173.50 -58.77 REMARK 500 9 LYS B 71 -63.55 -104.63 REMARK 500 9 SER B 72 80.71 -171.51 REMARK 500 10 GLU A 6 69.16 -110.77 REMARK 500 10 ARG A 8 -144.91 -136.11 REMARK 500 10 SER A 30 174.69 -51.84 REMARK 500 10 SER A 72 -71.26 -169.32 REMARK 500 10 GLU B 6 73.28 -113.86 REMARK 500 10 ARG B 8 -144.14 -135.27 REMARK 500 10 ILE B 18 164.01 55.79 REMARK 500 10 SER B 30 172.55 -55.19 REMARK 500 10 LYS B 71 -55.99 -128.61 REMARK 500 11 ARG A 8 -144.20 -135.16 REMARK 500 11 SER A 30 171.23 -59.71 REMARK 500 11 SER A 72 -55.01 -179.35 REMARK 500 11 GLU B 6 79.32 -104.06 REMARK 500 11 ARG B 8 -144.73 -135.56 REMARK 500 11 SER B 30 165.16 -45.34 REMARK 500 11 LYS B 71 -174.88 -67.83 REMARK 500 11 SER B 72 82.02 -171.79 REMARK 500 12 ARG A 8 -144.40 -136.13 REMARK 500 12 SER A 30 175.66 -55.25 REMARK 500 12 SER A 72 72.58 173.24 REMARK 500 12 GLU B 6 76.57 -103.17 REMARK 500 12 ARG B 8 -144.90 -135.10 REMARK 500 12 SER B 30 170.36 -45.65 REMARK 500 12 LYS B 71 -68.35 -150.50 REMARK 500 12 SER B 72 80.47 47.32 REMARK 500 13 ARG A 8 -145.25 -134.74 REMARK 500 13 SER A 30 175.01 -47.02 REMARK 500 13 GLU A 39 77.24 -157.10 REMARK 500 13 PRO A 54 46.40 -74.98 REMARK 500 13 ALA A 55 27.45 -161.99 REMARK 500 13 SER A 72 78.12 51.01 REMARK 500 13 ARG B 8 -144.38 -135.79 REMARK 500 13 LYS B 71 -172.60 -69.14 REMARK 500 13 SER B 72 -53.03 176.94 REMARK 500 14 ARG A 8 -143.83 -135.93 REMARK 500 14 SER A 30 170.48 -46.09 REMARK 500 14 GLU A 39 76.32 -153.19 REMARK 500 14 PRO A 54 49.09 -74.96 REMARK 500 14 ALA A 55 30.96 -167.56 REMARK 500 14 LYS A 71 -171.36 -59.07 REMARK 500 14 ARG B 8 -143.42 -135.72 REMARK 500 14 LYS B 29 79.65 -113.92 REMARK 500 14 SER B 30 169.39 -44.52 REMARK 500 14 LYS B 71 -172.97 -65.99 REMARK 500 14 SER B 72 86.99 48.80 REMARK 500 15 ARG A 8 -143.96 -133.54 REMARK 500 15 SER A 30 175.57 -52.85 REMARK 500 15 SER A 72 86.52 48.37 REMARK 500 15 GLU B 6 69.77 -107.22 REMARK 500 15 ARG B 8 -143.40 -135.98 REMARK 500 15 SER B 30 173.78 -51.06 REMARK 500 15 LYS B 71 -63.69 -98.54 REMARK 500 15 SER B 72 95.61 -170.92 REMARK 500 16 ARG A 8 -144.91 -135.47 REMARK 500 16 SER A 30 172.48 -48.13 REMARK 500 16 SER A 72 -54.09 -178.86 REMARK 500 16 ARG B 8 -144.37 -132.20 REMARK 500 16 LEU B 15 -161.44 -110.69 REMARK 500 16 ILE B 18 165.25 55.88 REMARK 500 16 SER B 30 174.19 -46.91 REMARK 500 16 GLU B 39 87.96 -156.22 REMARK 500 16 PRO B 54 47.69 -74.98 REMARK 500 16 ALA B 55 29.63 -164.59 REMARK 500 16 SER B 72 -52.69 81.47 REMARK 500 17 ARG A 8 -145.49 -134.89 REMARK 500 17 ILE A 18 164.53 55.85 REMARK 500 17 SER A 30 170.35 -59.15 REMARK 500 17 LYS A 71 -72.61 -94.35 REMARK 500 17 SER A 72 95.10 65.27 REMARK 500 17 ARG B 8 -141.35 -134.76 REMARK 500 17 SER B 30 163.10 -47.96 REMARK 500 17 PRO B 54 46.50 -75.05 REMARK 500 17 ALA B 55 28.89 -162.13 REMARK 500 17 LYS B 71 -62.15 -147.74 REMARK 500 17 SER B 72 74.82 -179.09 REMARK 500 18 ARG A 8 -143.45 -132.84 REMARK 500 18 SER A 30 171.54 -57.65 REMARK 500 18 SER A 72 -53.92 179.08 REMARK 500 18 ARG B 8 -145.05 -135.00 REMARK 500 18 SER B 30 171.87 -54.57 REMARK 500 18 LYS B 71 -60.32 -124.23 REMARK 500 18 SER B 72 88.50 61.97 REMARK 500 19 ARG A 8 -143.88 -135.92 REMARK 500 19 SER A 30 174.72 -46.51 REMARK 500 19 PRO A 54 47.84 -74.98 REMARK 500 19 ALA A 55 30.77 -166.83 REMARK 500 19 LYS A 71 -171.36 -68.81 REMARK 500 19 SER A 72 95.81 -169.92 REMARK 500 19 GLU B 6 72.93 -110.65 REMARK 500 19 ARG B 8 -143.39 -134.35 REMARK 500 19 SER B 30 176.46 -56.85 REMARK 500 19 LYS B 71 -69.66 -124.97 REMARK 500 19 SER B 72 100.93 -179.11 REMARK 500 20 ARG A 8 -145.41 -135.24 REMARK 500 20 SER A 30 162.11 -42.43 REMARK 500 20 SER A 72 86.17 -169.58 REMARK 500 20 GLU B 6 77.11 -107.96 REMARK 500 20 ARG B 8 -145.21 -134.53 REMARK 500 20 SER B 30 -179.76 -50.71 REMARK 500 20 HIS B 34 -60.18 -120.10 REMARK 500 20 GLN B 37 -129.04 -118.14 REMARK 500 20 SER B 72 -59.48 -173.57 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED.
REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED.
DBREF 1QNK A 5 73 UNP AAC03540 AAC03540 5 73 DBREF 1QNK B 5 73 UNP AAC03540 AAC03540 5 73
SEQRES 1 A 69 THR GLU LEU ARG CYS GLN CYS LEU GLN THR LEU GLN GLY SEQRES 2 A 69 ILE HIS LEU LYS ASN ILE GLN SER VAL LYS VAL LYS SER SEQRES 3 A 69 PRO GLY PRO HIS CYS ALA GLN THR GLU VAL ILE ALA THR SEQRES 4 A 69 LEU LYS ASN GLY GLN LYS ALA CYS LEU ASN PRO ALA SER SEQRES 5 A 69 PRO MET VAL LYS LYS ILE ILE GLU LYS MET LEU LYS ASN SEQRES 6 A 69 GLY LYS SER ASN SEQRES 1 B 69 THR GLU LEU ARG CYS GLN CYS LEU GLN THR LEU GLN GLY SEQRES 2 B 69 ILE HIS LEU LYS ASN ILE GLN SER VAL LYS VAL LYS SER SEQRES 3 B 69 PRO GLY PRO HIS CYS ALA GLN THR GLU VAL ILE ALA THR SEQRES 4 B 69 LEU LYS ASN GLY GLN LYS ALA CYS LEU ASN PRO ALA SER SEQRES 5 B 69 PRO MET VAL LYS LYS ILE ILE GLU LYS MET LEU LYS ASN SEQRES 6 B 69 GLY LYS SER ASN
HELIX 1 1 MET A 58 LYS A 68 1 11 HELIX 2 2 MET B 58 LYS B 68 1 11
SHEET 1 1 6 LYS A 49 LEU A 52 0 SHEET 2 1 6 GLU A 39 LEU A 44 -1 SHEET 3 1 6 SER A 25 LYS A 29 -1 SHEET 4 1 6 SER B 25 LYS B 29 -1 SHEET 5 1 6 GLU B 39 LEU B 44 -1 SHEET 6 1 6 LYS B 49 LEU B 52 -1
SSBOND 1 CYS A 9 CYS A 35 1555 1555 2.01 SSBOND 2 CYS A 11 CYS A 51 1555 1555 1.91 SSBOND 3 CYS B 9 CYS B 35 1555 1555 1.94 SSBOND 4 CYS B 11 CYS B 51 1555 1555 1.96
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000