1QGE - Header Asymmetric Unit

HEADER HYDROLASE 23-APR-99 1QGE

TITLE NEW CRYSTAL FORM OF PSEUDOMONAS GLUMAE (FORMERLY CHROMOBACTERIUM TITLE 2 VISCOSUM ATCC 6918) LIPASE

COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (TRIACYLGLYCEROL HYDROLASE); COMPND 3 CHAIN: D; COMPND 4 EC: 3.1.1.3; COMPND 5 OTHER_DETAILS: CHAIN BREAK FROM V 220 - G 222; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PROTEIN (TRIACYLGLYCEROL HYDROLASE); COMPND 8 CHAIN: E; COMPND 9 EC: 3.1.1.3

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA GLUMAE; SOURCE 3 ORGANISM_TAXID: 337; SOURCE 4 STRAIN: CHROMOBACTERIUM VISCOSUM; SOURCE 5 ATCC: 6918; SOURCE 6 COLLECTION: 6918; SOURCE 7 CELLULAR_LOCATION: EXTRACELLULAR; SOURCE 8 OTHER_DETAILS: ATCC; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: BURKHOLDERIA GLUMAE; SOURCE 11 ORGANISM_TAXID: 337; SOURCE 12 STRAIN: CHROMOBACTERIUM VISCOSUM; SOURCE 13 ATCC: 6918; SOURCE 14 COLLECTION: 6918; SOURCE 15 CELLULAR_LOCATION: EXTRACELLULAR; SOURCE 16 OTHER_DETAILS: ATCC

KEYWDS PSEUDOMONADACEAE, CIS-PEPTIDE, CLOSED CONFORMATION, HYDROLASE, LID

EXPDTA X-RAY DIFFRACTION

AUTHOR D.A.LANG,P.STADLER,A.KOVACS,F.PALTAUF,B.W.DIJKSTRA

REVDAT 3 13-JUL-11 1QGE 1 VERSN REVDAT 2 24-FEB-09 1QGE 1 VERSN REVDAT 1 06-MAY-99 1QGE 0

JRNL AUTH D.A.LANG,P.STADLER,A.KOVACS,F.PALTAUF,B.W.DIJKSTRA JRNL TITL STRUCTURAL AND KINETIC INVESTIGATIONS OF ENANTIOMERIC JRNL TITL 2 BINDING MODE OF SUBCLASS I LIPASES FROM THE FAMILY OF JRNL TITL 3 PSEUDOMONADACEAE JRNL REF TO BE PUBLISHED JRNL REFN

REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.LANG,B.HOFMANN,L.HAALCK,H.J.HECHT,F.SPENER,R.D.SCHMID, REMARK 1 AUTH 2 D.SCHOMBURG REMARK 1 TITL CRYSTAL STRUCTURE OF A BACTERIAL LIPASE FROM CHROMOBACTERIUM REMARK 1 TITL 2 VISCOSUM ATCC 6918 REFINED AT 1.6 ANGSTROMS RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 259 704 1996 REMARK 1 REFN ISSN 0022-2836 REMARK 1 DOI 10.1006/JMBI.1996.0352 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.E.M.NOBLE,A.CLEASBY,L.N.JOHNSON,M.R.EGMOND,L.G.J.FRENKEN REMARK 1 TITL CRYSTAL STRUCTURE OF TRIACYLGLYCEROL LIPASE FROM PSEUDOMONAS REMARK 1 TITL 2 GLUMAE REVEALS A PARTIALLY REDUNDANT CATALYTIC ASPARTATE REMARK 1 REF FEBS LETT. V. 331 123 1993 REMARK 1 REFN ISSN 0014-5793 REMARK 1 DOI 10.1016/0014-5793(93)80310-Q

REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 28058 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2315 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 324 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.008 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.025 ; 0.040 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.047 ; 0.050 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.104 ; 0.150 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.171 ; 0.300 REMARK 3 MULTIPLE TORSION (A) : 0.263 ; 0.300 REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : 12.200; 15.000 REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.959 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.495 ; 3.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.193 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 1.817 ; 3.000 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE DISORDERED REGION (VAL 220, LEU 221 REMARK 3 AND GLY 223) WAS NOT MODELED OR REFINED.

REMARK 4 REMARK 4 1QGE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-APR-99. REMARK 100 THE RCSB ID CODE IS RCSB000931.

REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-96 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28124 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.27000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1CVL REMARK 200 REMARK 200 REMARK: NULL

REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM 10 % PEG REMARK 280 6000, 5 % PEG 1000, 100 MM HEPES BUFFER, PH 7.8

REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.49000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.34500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.67500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.34500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.49000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 21.67500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL

REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.

REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 6050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000

REMARK 400 REMARK 400 COMPOUND REMARK 400 PARTLY DEGRADED LIPASE AS A RESULT OF UNSPECIFIC REMARK 400 PROTEOLYTIC DIGESTION DURING PURIFICATION AND/OR STORAGE REMARK 400 PROVEN BY MALDI-TOF MASS SPECTROSCOPY MOLECULAR WEIGHT: REMARK 400 CALCULATED -- 33091 DALTON, MEASURED -- 32839 DALTON REMARK 400 REMARK 400 NO OXYANION LOOP FORMATION, BUT A SLIGHT MOVEMENT OF THE REMARK 400 LID REGION ALREADY OCCURED. THE STRUCTURE STILL REPRESENTS REMARK 400 THE CLOSED, INACTIVE CONFORMATIONAL STATES OF THE LIPASE

REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL D 220 REMARK 465 LEU D 221 REMARK 465 GLY D 222

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP E 241 CB - CG - OD1 ANGL. DEV. = 11.2 DEGREES REMARK 500 ASP E 241 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG E 257 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 GLN E 291 O - C - N ANGL. DEV. = -16.4 DEGREES REMARK 500 ARG E 296 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG E 313 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS D 22 151.21 -43.60 REMARK 500 GLN D 53 -77.90 -93.22 REMARK 500 SER D 87 -130.27 54.72 REMARK 500 GLN E 291 -162.86 -113.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN E 291 LEU E 292 -67.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLN E 291 -17.04 REMARK 500 REMARK 500 REMARK: NULL

REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 429 DISTANCE = 5.40 ANGSTROMS

REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 320 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 241 OD2 REMARK 620 2 ASP E 287 OD1 170.8 REMARK 620 3 GLN E 291 O 85.7 101.1 REMARK 620 4 VAL E 295 O 95.5 92.9 66.7 REMARK 620 5 HOH E 321 O 88.2 84.0 105.9 171.4 REMARK 620 6 HOH E 330 O 92.8 82.4 164.1 97.7 89.8 REMARK 620 N 1 2 3 4 5

REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ACT REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: THE CATALYTIC TRIAD OF THE ACTIVE CENTER REMARK 800 CONSISTS OF THE RESIDUES SER 87 - HIS 285 - ASP 263, ALTHOUGH REMARK 800 THEY ARE NOT EXPOSED TO THE SOLVENT. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA E 320

REMARK 999 REMARK 999 SEQUENCE REMARK 999 1QGE SWS Q05489 1 - 39 NOT IN ATOMS LIST REMARK 999 REMARK 999 REFERENCE: THE SEQUENCE FOR PSEUDOMONAS GLUMAE DESCRIBED REMARK 999 IN FRENKEN ET AL. (1992), APPL. ENVIR. MICROBIOL. 58 REMARK 999 3787-3791; IS IDENTICAL TO THE AMINO ACID SEQUENCE OF REMARK 999 CHROMOBACTERIUM VISCOSUM DESCRIBED IN SHIZUOKA ET AL., REMARK 999 1989 (GERMAN PATENT 3908131 A1).

DBREF 1QGE D 1 222 UNP Q05489 LIP_BURGL 40 261 DBREF 1QGE E 223 319 UNP Q05489 LIP_BURGL 262 358

SEQRES 1 D 222 ALA ASP THR TYR ALA ALA THR ARG TYR PRO VAL ILE LEU SEQRES 2 D 222 VAL HIS GLY LEU ALA GLY THR ASP LYS PHE ALA ASN VAL SEQRES 3 D 222 VAL ASP TYR TRP TYR GLY ILE GLN SER ASP LEU GLN SER SEQRES 4 D 222 HIS GLY ALA LYS VAL TYR VAL ALA ASN LEU SER GLY PHE SEQRES 5 D 222 GLN SER ASP ASP GLY PRO ASN GLY ARG GLY GLU GLN LEU SEQRES 6 D 222 LEU ALA TYR VAL LYS GLN VAL LEU ALA ALA THR GLY ALA SEQRES 7 D 222 THR LYS VAL ASN LEU ILE GLY HIS SER GLN GLY GLY LEU SEQRES 8 D 222 THR SER ARG TYR VAL ALA ALA VAL ALA PRO GLN LEU VAL SEQRES 9 D 222 ALA SER VAL THR THR ILE GLY THR PRO HIS ARG GLY SER SEQRES 10 D 222 GLU PHE ALA ASP PHE VAL GLN ASP VAL LEU LYS THR ASP SEQRES 11 D 222 PRO THR GLY LEU SER SER THR VAL ILE ALA ALA PHE VAL SEQRES 12 D 222 ASN VAL PHE GLY THR LEU VAL SER SER SER HIS ASN THR SEQRES 13 D 222 ASP GLN ASP ALA LEU ALA ALA LEU ARG THR LEU THR THR SEQRES 14 D 222 ALA GLN THR ALA THR TYR ASN ARG ASN PHE PRO SER ALA SEQRES 15 D 222 GLY LEU GLY ALA PRO GLY SER CYS GLN THR GLY ALA ALA SEQRES 16 D 222 THR GLU THR VAL GLY GLY SER GLN HIS LEU LEU TYR SER SEQRES 17 D 222 TRP GLY GLY THR ALA ILE GLN PRO THR SER THR VAL LEU SEQRES 18 D 222 GLY SEQRES 1 E 97 VAL VAL GLY ALA THR ASP THR SER THR GLY THR LEU ASP SEQRES 2 E 97 VAL ALA ASN VAL THR ASP PRO SER THR LEU ALA LEU LEU SEQRES 3 E 97 ALA THR GLY ALA VAL MET ILE ASN ARG ALA SER GLY GLN SEQRES 4 E 97 ASN ASP GLY LEU VAL SER ARG CYS SER SER LEU PHE GLY SEQRES 5 E 97 GLN VAL ILE SER THR SER TYR HIS TRP ASN HIS LEU ASP SEQRES 6 E 97 GLU ILE ASN GLN LEU LEU GLY VAL ARG GLY ALA ASN ALA SEQRES 7 E 97 GLU ASP PRO VAL ALA VAL ILE ARG THR HIS VAL ASN ARG SEQRES 8 E 97 LEU LYS LEU GLN GLY VAL

HET CA E 320 1

HETNAM CA CALCIUM ION

FORMUL 3 CA CA 2+ FORMUL 4 HOH *324(H2 O)

HELIX 1 1 ILE D 33 HIS D 40 1 8 HELIX 2 2 ARG D 61 THR D 76 1 16 HELIX 3 3 SER D 87 VAL D 99 5 13 HELIX 4 4 PRO D 101 LEU D 103 5 3 HELIX 5 5 GLU D 118 THR D 129 1 12 HELIX 6 6 THR D 137 LEU D 149 1 13 HELIX 7 7 THR D 156 LEU D 167 1 12 HELIX 8 8 THR D 169 ASN D 178 1 10 HELIX 9 9 VAL E 236 THR E 240 5 5 HELIX 10 10 PRO E 242 ARG E 257 1 16 HELIX 11 11 ARG E 268 SER E 271 1 4 HELIX 12 12 ASP E 287 ILE E 289 5 3 HELIX 13 13 PRO E 303 GLN E 317 1 15

SHEET 1 A 6 VAL D 44 VAL D 46 0 SHEET 2 A 6 PRO D 10 VAL D 14 1 N VAL D 11 O TYR D 45 SHEET 3 A 6 VAL D 81 HIS D 86 1 N ASN D 82 O PRO D 10 SHEET 4 A 6 VAL D 104 ILE D 110 1 N ALA D 105 O VAL D 81 SHEET 5 A 6 GLN D 203 TRP D 209 1 N LEU D 205 O VAL D 107 SHEET 6 A 6 THR D 196 THR D 198 -1 N GLU D 197 O HIS D 204

SSBOND 1 CYS D 190 CYS E 269 1555 1555 2.02

LINK OD2 ASP E 241 CA CA E 320 1555 1555 2.40 LINK OD1 ASP E 287 CA CA E 320 1555 1555 2.57 LINK O GLN E 291 CA CA E 320 1555 1555 2.61 LINK O VAL E 295 CA CA E 320 1555 1555 2.45 LINK CA CA E 320 O HOH E 321 1555 1555 2.50 LINK CA CA E 320 O HOH E 330 1555 1555 2.37

SITE 1 ACT 3 SER D 87 HIS E 285 ASP E 263 SITE 1 AC1 6 ASP E 241 ASP E 287 GLN E 291 VAL E 295 SITE 2 AC1 6 HOH E 321 HOH E 330

CRYST1 40.980 43.350 140.690 90.00 90.00 90.00 P 21 21 21 4

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 0.024402 0.000000 0.000000 0.00000

SCALE2 0.000000 0.023068 0.000000 0.00000

SCALE3 0.000000 0.000000 0.007108 0.00000