10 20 30 40 50 60 70 80 1Q8A - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 20-AUG-03 1Q8A
TITLE COBALAMIN-DEPENDENT METHIONINE SYNTHASE (1-566) FROM TITLE 2 THERMOTOGA MARITIMA (CD2+:L-HCY COMPLEX, SE-MET)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5-METHYLTETRAHYDROFOLATE S-HOMOCYSTEINE COMPND 3 METHYLTRANSFERASE; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: METH_TM (RESIDUES 1-566); COMPND 6 EC: 2.1.1.13; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21-DE3; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET29A
KEYWDS HOMOCYSTEINE, METHIONINE, FOLATE, COBALAMIN, VITAMIN B12, KEYWDS 2 TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR J.C.EVANS,D.P.HUDDLER,M.T.HILGERS,G.ROMANCHUK,R.G.MATTHEWS, AUTHOR 2 M.L.LUDWIG
REVDAT 2 24-FEB-09 1Q8A 1 VERSN REVDAT 1 23-MAR-04 1Q8A 0
JRNL AUTH J.C.EVANS,D.P.HUDDLER,M.T.HILGERS,G.ROMANCHUK, JRNL AUTH 2 R.G.MATTHEWS,M.L.LUDWIG JRNL TITL STRUCTURES OF THE N-TERMINAL MODULES IMPLY LARGE JRNL TITL 2 DOMAIN MOTIONS DURING CATALYSIS BY METHIONINE JRNL TITL 3 SYNTHASE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 101 3729 2004 JRNL REFN ISSN 0027-8424 JRNL PMID 14752199 JRNL DOI 10.1073/PNAS.0308082100
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 125901 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM THROUGHOUT REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 12710 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8756 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 233 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1Q8A COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-AUG-03. REMARK 100 THE RCSB ID CODE IS RCSB020041.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 5ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 125901 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROPYLENE GLYCOL, GLYCEROL, PEG REMARK 280 8000, CITRATE, 1,2,3-HEPTANETRIOL, CADMIUM, PH 5.7, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.09500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 560 REMARK 465 PRO A 561 REMARK 465 ARG A 562 REMARK 465 ALA A 563 REMARK 465 GLU A 564 REMARK 465 VAL A 565 REMARK 465 LYS A 566 REMARK 465 VAL B 240 REMARK 465 GLU B 241 REMARK 465 ASN B 242 REMARK 465 GLY B 243 REMARK 465 LYS B 244 REMARK 465 GLY B 440 REMARK 465 LYS B 441 REMARK 465 ASP B 442 REMARK 465 VAL B 443 REMARK 465 PRO B 444 REMARK 465 LYS B 445 REMARK 465 GLU B 559 REMARK 465 LEU B 560 REMARK 465 PRO B 561 REMARK 465 ARG B 562 REMARK 465 ALA B 563 REMARK 465 GLU B 564 REMARK 465 VAL B 565 REMARK 465 LYS B 566
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 412 N - CA - C ANGL. DEV. = 24.4 DEGREES REMARK 500 SER A 412 C - N - CA ANGL. DEV. = 15.4 DEGREES REMARK 500 SER B 412 N - CA - C ANGL. DEV. = 18.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 42 64.77 -153.91 REMARK 500 CYS A 207 -176.23 69.93 REMARK 500 SER A 208 -40.72 67.98 REMARK 500 GLU A 241 -127.21 -108.76 REMARK 500 CYS A 272 -152.18 -110.12 REMARK 500 ASN A 384 -15.43 79.17 REMARK 500 SER A 412 148.74 48.08 REMARK 500 ASP A 465 79.53 39.28 REMARK 500 PHE A 466 10.64 -150.46 REMARK 500 LYS A 484 64.35 36.36 REMARK 500 ALA B 42 63.51 -153.07 REMARK 500 CYS B 207 -171.21 65.59 REMARK 500 SER B 208 -37.06 65.71 REMARK 500 PRO B 238 -49.70 -19.47 REMARK 500 CYS B 272 -156.27 -115.33 REMARK 500 CYS B 273 125.83 -38.22 REMARK 500 ASN B 384 -17.08 77.81 REMARK 500 SER B 412 127.26 67.58 REMARK 500 ASP B 465 52.71 38.03 REMARK 500 ALA B 481 45.48 -155.40 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 601 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 602 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HCS A 701 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HCS B 702
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Q7M RELATED DB: PDB REMARK 900 COBALAMIN-DEPENDENT METHIONINE SYNTHASE (METH) FROM REMARK 900 THERMOTOGA MARITIMA (OXIDIZED, MONOCLINIC) REMARK 900 RELATED ID: 1Q7Q RELATED DB: PDB REMARK 900 COBALAMIN-DEPENDENT METHIONINE SYNTHASE (1-566) FROM T. REMARK 900 MARITIMA (OXIDIZED, ORTHORHOMBIC) REMARK 900 RELATED ID: 1Q7Z RELATED DB: PDB REMARK 900 COBALAMIN-DEPENDENT METHIONINE SYNTHASE (1-566) FROM REMARK 900 THERMOTOGA MARITIMA (CD2+ COMPLEX) REMARK 900 RELATED ID: 1Q85 RELATED DB: PDB REMARK 900 COBALAMIN-DEPENDENT METHIONINE SYNTHASE (1-566) FROM REMARK 900 THERMOTOGA MARITIMA (CD2+ COMPLEX, SE-MET)
DBREF 1Q8A A 1 566 UNP Q9WYA5 Q9WYA5_THEMA 1 566 DBREF 1Q8A B 1 566 UNP Q9WYA5 Q9WYA5_THEMA 1 566
SEQADV 1Q8A MSE A 1 UNP Q9WYA5 MET 1 MODIFIED RESIDUE SEQADV 1Q8A MSE A 27 UNP Q9WYA5 MET 27 MODIFIED RESIDUE SEQADV 1Q8A MSE A 71 UNP Q9WYA5 MET 71 MODIFIED RESIDUE SEQADV 1Q8A MSE A 135 UNP Q9WYA5 MET 135 MODIFIED RESIDUE SEQADV 1Q8A MSE A 174 UNP Q9WYA5 MET 174 MODIFIED RESIDUE SEQADV 1Q8A MSE A 334 UNP Q9WYA5 MET 334 MODIFIED RESIDUE SEQADV 1Q8A MSE A 422 UNP Q9WYA5 MET 422 MODIFIED RESIDUE SEQADV 1Q8A MSE A 439 UNP Q9WYA5 MET 439 MODIFIED RESIDUE SEQADV 1Q8A MSE A 537 UNP Q9WYA5 MET 537 MODIFIED RESIDUE SEQADV 1Q8A MSE A 545 UNP Q9WYA5 MET 545 MODIFIED RESIDUE SEQADV 1Q8A MSE B 1 UNP Q9WYA5 MET 1 MODIFIED RESIDUE SEQADV 1Q8A MSE B 27 UNP Q9WYA5 MET 27 MODIFIED RESIDUE SEQADV 1Q8A MSE B 71 UNP Q9WYA5 MET 71 MODIFIED RESIDUE SEQADV 1Q8A MSE B 135 UNP Q9WYA5 MET 135 MODIFIED RESIDUE SEQADV 1Q8A MSE B 174 UNP Q9WYA5 MET 174 MODIFIED RESIDUE SEQADV 1Q8A MSE B 334 UNP Q9WYA5 MET 334 MODIFIED RESIDUE SEQADV 1Q8A MSE B 422 UNP Q9WYA5 MET 422 MODIFIED RESIDUE SEQADV 1Q8A MSE B 439 UNP Q9WYA5 MET 439 MODIFIED RESIDUE SEQADV 1Q8A MSE B 537 UNP Q9WYA5 MET 537 MODIFIED RESIDUE SEQADV 1Q8A MSE B 545 UNP Q9WYA5 MET 545 MODIFIED RESIDUE
SEQRES 1 A 566 MSE ARG ASN ARG ARG GLU VAL SER LYS LEU LEU SER GLU SEQRES 2 A 566 ARG VAL LEU LEU LEU ASP GLY ALA TYR GLY THR GLU PHE SEQRES 3 A 566 MSE LYS TYR GLY TYR ASP ASP LEU PRO GLU GLU LEU ASN SEQRES 4 A 566 ILE LYS ALA PRO ASP VAL VAL LEU LYS VAL HIS ARG SER SEQRES 5 A 566 TYR ILE GLU SER GLY SER ASP VAL ILE LEU THR ASN THR SEQRES 6 A 566 PHE GLY ALA THR ARG MSE LYS LEU ARG LYS HIS GLY LEU SEQRES 7 A 566 GLU ASP LYS LEU ASP PRO ILE VAL ARG ASN ALA VAL ARG SEQRES 8 A 566 ILE ALA ARG ARG ALA ALA GLY GLU LYS LEU VAL PHE GLY SEQRES 9 A 566 ASP ILE GLY PRO THR GLY GLU LEU PRO TYR PRO LEU GLY SEQRES 10 A 566 SER THR LEU PHE GLU GLU PHE TYR GLU ASN PHE ARG GLU SEQRES 11 A 566 THR VAL GLU ILE MSE VAL GLU GLU GLY VAL ASP GLY ILE SEQRES 12 A 566 ILE PHE GLU THR PHE SER ASP ILE LEU GLU LEU LYS ALA SEQRES 13 A 566 ALA VAL LEU ALA ALA ARG GLU VAL SER ARG ASP VAL PHE SEQRES 14 A 566 LEU ILE ALA HIS MSE THR PHE ASP GLU LYS GLY ARG SER SEQRES 15 A 566 LEU THR GLY THR ASP PRO ALA ASN PHE ALA ILE THR PHE SEQRES 16 A 566 ASP GLU LEU ASP ILE ASP ALA LEU GLY ILE ASN CYS SER SEQRES 17 A 566 LEU GLY PRO GLU GLU ILE LEU PRO ILE PHE GLN GLU LEU SEQRES 18 A 566 SER GLN TYR THR ASP LYS PHE LEU VAL VAL GLU PRO ASN SEQRES 19 A 566 ALA GLY LYS PRO ILE VAL GLU ASN GLY LYS THR VAL TYR SEQRES 20 A 566 PRO LEU LYS PRO HIS ASP PHE ALA VAL HIS ILE ASP SER SEQRES 21 A 566 TYR TYR GLU LEU GLY VAL ASN ILE PHE GLY GLY CYS CYS SEQRES 22 A 566 GLY THR THR PRO GLU HIS VAL LYS LEU PHE ARG LYS VAL SEQRES 23 A 566 LEU GLY ASN ARG LYS PRO LEU GLN ARG LYS LYS LYS ARG SEQRES 24 A 566 ILE PHE ALA VAL SER SER PRO SER LYS LEU VAL THR PHE SEQRES 25 A 566 ASP HIS PHE VAL VAL ILE GLY GLU ARG ILE ASN PRO ALA SEQRES 26 A 566 GLY ARG LYS LYS LEU TRP ALA GLU MSE GLN LYS GLY ASN SEQRES 27 A 566 GLU GLU ILE VAL ILE LYS GLU ALA LYS THR GLN VAL GLU SEQRES 28 A 566 LYS GLY ALA GLU VAL LEU ASP VAL ASN PHE GLY ILE GLU SEQRES 29 A 566 SER GLN ILE ASP VAL ARG TYR VAL GLU LYS ILE VAL GLN SEQRES 30 A 566 THR LEU PRO TYR VAL SER ASN VAL PRO LEU SER LEU ASP SEQRES 31 A 566 ILE GLN ASN VAL ASP LEU THR GLU ARG ALA LEU ARG ALA SEQRES 32 A 566 TYR PRO GLY ARG SER LEU PHE ASN SER ALA LYS VAL ASP SEQRES 33 A 566 GLU GLU GLU LEU GLU MSE LYS ILE ASN LEU LEU LYS LYS SEQRES 34 A 566 TYR GLY GLY THR LEU ILE VAL LEU LEU MSE GLY LYS ASP SEQRES 35 A 566 VAL PRO LYS SER PHE GLU GLU ARG LYS GLU TYR PHE GLU SEQRES 36 A 566 LYS ALA LEU LYS ILE LEU GLU ARG HIS ASP PHE SER ASP SEQRES 37 A 566 ARG VAL ILE PHE ASP PRO GLY VAL LEU PRO LEU GLY ALA SEQRES 38 A 566 GLU GLY LYS PRO VAL GLU VAL LEU LYS THR ILE GLU PHE SEQRES 39 A 566 ILE SER SER LYS GLY PHE ASN THR THR VAL GLY LEU SER SEQRES 40 A 566 ASN LEU SER PHE GLY LEU PRO ASP ARG SER TYR TYR ASN SEQRES 41 A 566 THR ALA PHE LEU VAL LEU GLY ILE SER LYS GLY LEU SER SEQRES 42 A 566 SER ALA ILE MSE ASN PRO LEU ASP GLU THR LEU MSE LYS SEQRES 43 A 566 THR LEU ASN ALA THR LEU VAL ILE LEU GLU LYS LYS GLU SEQRES 44 A 566 LEU PRO ARG ALA GLU VAL LYS SEQRES 1 B 566 MSE ARG ASN ARG ARG GLU VAL SER LYS LEU LEU SER GLU SEQRES 2 B 566 ARG VAL LEU LEU LEU ASP GLY ALA TYR GLY THR GLU PHE SEQRES 3 B 566 MSE LYS TYR GLY TYR ASP ASP LEU PRO GLU GLU LEU ASN SEQRES 4 B 566 ILE LYS ALA PRO ASP VAL VAL LEU LYS VAL HIS ARG SER SEQRES 5 B 566 TYR ILE GLU SER GLY SER ASP VAL ILE LEU THR ASN THR SEQRES 6 B 566 PHE GLY ALA THR ARG MSE LYS LEU ARG LYS HIS GLY LEU SEQRES 7 B 566 GLU ASP LYS LEU ASP PRO ILE VAL ARG ASN ALA VAL ARG SEQRES 8 B 566 ILE ALA ARG ARG ALA ALA GLY GLU LYS LEU VAL PHE GLY SEQRES 9 B 566 ASP ILE GLY PRO THR GLY GLU LEU PRO TYR PRO LEU GLY SEQRES 10 B 566 SER THR LEU PHE GLU GLU PHE TYR GLU ASN PHE ARG GLU SEQRES 11 B 566 THR VAL GLU ILE MSE VAL GLU GLU GLY VAL ASP GLY ILE SEQRES 12 B 566 ILE PHE GLU THR PHE SER ASP ILE LEU GLU LEU LYS ALA SEQRES 13 B 566 ALA VAL LEU ALA ALA ARG GLU VAL SER ARG ASP VAL PHE SEQRES 14 B 566 LEU ILE ALA HIS MSE THR PHE ASP GLU LYS GLY ARG SER SEQRES 15 B 566 LEU THR GLY THR ASP PRO ALA ASN PHE ALA ILE THR PHE SEQRES 16 B 566 ASP GLU LEU ASP ILE ASP ALA LEU GLY ILE ASN CYS SER SEQRES 17 B 566 LEU GLY PRO GLU GLU ILE LEU PRO ILE PHE GLN GLU LEU SEQRES 18 B 566 SER GLN TYR THR ASP LYS PHE LEU VAL VAL GLU PRO ASN SEQRES 19 B 566 ALA GLY LYS PRO ILE VAL GLU ASN GLY LYS THR VAL TYR SEQRES 20 B 566 PRO LEU LYS PRO HIS ASP PHE ALA VAL HIS ILE ASP SER SEQRES 21 B 566 TYR TYR GLU LEU GLY VAL ASN ILE PHE GLY GLY CYS CYS SEQRES 22 B 566 GLY THR THR PRO GLU HIS VAL LYS LEU PHE ARG LYS VAL SEQRES 23 B 566 LEU GLY ASN ARG LYS PRO LEU GLN ARG LYS LYS LYS ARG SEQRES 24 B 566 ILE PHE ALA VAL SER SER PRO SER LYS LEU VAL THR PHE SEQRES 25 B 566 ASP HIS PHE VAL VAL ILE GLY GLU ARG ILE ASN PRO ALA SEQRES 26 B 566 GLY ARG LYS LYS LEU TRP ALA GLU MSE GLN LYS GLY ASN SEQRES 27 B 566 GLU GLU ILE VAL ILE LYS GLU ALA LYS THR GLN VAL GLU SEQRES 28 B 566 LYS GLY ALA GLU VAL LEU ASP VAL ASN PHE GLY ILE GLU SEQRES 29 B 566 SER GLN ILE ASP VAL ARG TYR VAL GLU LYS ILE VAL GLN SEQRES 30 B 566 THR LEU PRO TYR VAL SER ASN VAL PRO LEU SER LEU ASP SEQRES 31 B 566 ILE GLN ASN VAL ASP LEU THR GLU ARG ALA LEU ARG ALA SEQRES 32 B 566 TYR PRO GLY ARG SER LEU PHE ASN SER ALA LYS VAL ASP SEQRES 33 B 566 GLU GLU GLU LEU GLU MSE LYS ILE ASN LEU LEU LYS LYS SEQRES 34 B 566 TYR GLY GLY THR LEU ILE VAL LEU LEU MSE GLY LYS ASP SEQRES 35 B 566 VAL PRO LYS SER PHE GLU GLU ARG LYS GLU TYR PHE GLU SEQRES 36 B 566 LYS ALA LEU LYS ILE LEU GLU ARG HIS ASP PHE SER ASP SEQRES 37 B 566 ARG VAL ILE PHE ASP PRO GLY VAL LEU PRO LEU GLY ALA SEQRES 38 B 566 GLU GLY LYS PRO VAL GLU VAL LEU LYS THR ILE GLU PHE SEQRES 39 B 566 ILE SER SER LYS GLY PHE ASN THR THR VAL GLY LEU SER SEQRES 40 B 566 ASN LEU SER PHE GLY LEU PRO ASP ARG SER TYR TYR ASN SEQRES 41 B 566 THR ALA PHE LEU VAL LEU GLY ILE SER LYS GLY LEU SER SEQRES 42 B 566 SER ALA ILE MSE ASN PRO LEU ASP GLU THR LEU MSE LYS SEQRES 43 B 566 THR LEU ASN ALA THR LEU VAL ILE LEU GLU LYS LYS GLU SEQRES 44 B 566 LEU PRO ARG ALA GLU VAL LYS
MODRES 1Q8A MSE A 1 MET SELENOMETHIONINE MODRES 1Q8A MSE A 27 MET SELENOMETHIONINE MODRES 1Q8A MSE A 71 MET SELENOMETHIONINE MODRES 1Q8A MSE A 135 MET SELENOMETHIONINE MODRES 1Q8A MSE A 174 MET SELENOMETHIONINE MODRES 1Q8A MSE A 334 MET SELENOMETHIONINE MODRES 1Q8A MSE A 422 MET SELENOMETHIONINE MODRES 1Q8A MSE A 439 MET SELENOMETHIONINE MODRES 1Q8A MSE A 537 MET SELENOMETHIONINE MODRES 1Q8A MSE A 545 MET SELENOMETHIONINE MODRES 1Q8A MSE B 1 MET SELENOMETHIONINE MODRES 1Q8A MSE B 27 MET SELENOMETHIONINE MODRES 1Q8A MSE B 71 MET SELENOMETHIONINE MODRES 1Q8A MSE B 135 MET SELENOMETHIONINE MODRES 1Q8A MSE B 174 MET SELENOMETHIONINE MODRES 1Q8A MSE B 334 MET SELENOMETHIONINE MODRES 1Q8A MSE B 422 MET SELENOMETHIONINE MODRES 1Q8A MSE B 439 MET SELENOMETHIONINE MODRES 1Q8A MSE B 537 MET SELENOMETHIONINE MODRES 1Q8A MSE B 545 MET SELENOMETHIONINE
HET MSE A 1 8 HET MSE A 27 8 HET MSE A 71 8 HET MSE A 135 8 HET MSE A 174 8 HET MSE A 334 8 HET MSE A 422 8 HET MSE A 439 8 HET MSE A 537 8 HET MSE A 545 8 HET MSE B 1 8 HET MSE B 27 8 HET MSE B 71 8 HET MSE B 135 8 HET MSE B 174 8 HET MSE B 334 8 HET MSE B 422 8 HET MSE B 439 8 HET MSE B 537 8 HET MSE B 545 8 HET CD A 601 1 HET CD B 602 1 HET HCS A 701 8 HET HCS B 702 8
HETNAM MSE SELENOMETHIONINE HETNAM CD CADMIUM ION HETNAM HCS 2-AMINO-4-MERCAPTO-BUTYRIC ACID
FORMUL 1 MSE 20(C5 H11 N O2 SE) FORMUL 3 CD 2(CD 2+) FORMUL 5 HCS 2(C4 H9 N O2 S) FORMUL 7 HOH *233(H2 O)
HELIX 1 1 ASN A 3 ARG A 14 1 12 HELIX 2 2 TYR A 22 MSE A 27 1 6 HELIX 3 3 LYS A 28 GLY A 30 5 3 HELIX 4 4 LEU A 34 GLU A 36 5 3 HELIX 5 5 GLU A 37 ALA A 42 1 6 HELIX 6 6 ALA A 42 GLU A 55 1 14 HELIX 7 7 THR A 69 LYS A 75 1 7 HELIX 8 8 HIS A 76 GLY A 77 5 2 HELIX 9 9 LEU A 78 ASP A 80 5 3 HELIX 10 10 LYS A 81 GLY A 98 1 18 HELIX 11 11 LEU A 120 GLY A 139 1 20 HELIX 12 12 ASP A 150 SER A 165 1 16 HELIX 13 13 ASP A 187 GLU A 197 1 11 HELIX 14 14 GLY A 210 THR A 225 1 16 HELIX 15 15 LYS A 250 VAL A 256 1 7 HELIX 16 16 HIS A 257 LEU A 264 1 8 HELIX 17 17 THR A 276 GLY A 288 1 13 HELIX 18 18 ARG A 327 LYS A 336 1 10 HELIX 19 19 GLU A 339 LYS A 352 1 14 HELIX 20 20 ILE A 363 ILE A 367 5 5 HELIX 21 21 ASP A 368 SER A 383 1 16 HELIX 22 22 ASN A 393 ALA A 403 1 11 HELIX 23 23 ASP A 416 GLY A 431 1 16 HELIX 24 24 SER A 446 HIS A 464 1 19 HELIX 25 25 PHE A 466 ASP A 468 5 3 HELIX 26 26 PRO A 478 GLU A 482 5 5 HELIX 27 27 LYS A 484 LYS A 498 1 15 HELIX 28 28 GLY A 505 SER A 510 5 6 HELIX 29 29 ASP A 515 LYS A 530 1 16 HELIX 30 30 ASP A 541 LEU A 555 1 15 HELIX 31 31 ASN B 3 ARG B 14 1 12 HELIX 32 32 TYR B 22 TYR B 29 1 8 HELIX 33 33 LEU B 34 GLU B 36 5 3 HELIX 34 34 GLU B 37 ALA B 42 1 6 HELIX 35 35 ALA B 42 SER B 56 1 15 HELIX 36 36 THR B 69 ARG B 74 1 6 HELIX 37 37 LYS B 75 GLY B 77 5 3 HELIX 38 38 LEU B 78 ASP B 80 5 3 HELIX 39 39 LYS B 81 GLY B 98 1 18 HELIX 40 40 LEU B 120 GLY B 139 1 20 HELIX 41 41 ASP B 150 SER B 165 1 16 HELIX 42 42 ASP B 187 GLU B 197 1 11 HELIX 43 43 GLY B 210 THR B 225 1 16 HELIX 44 44 LYS B 250 VAL B 256 1 7 HELIX 45 45 HIS B 257 LEU B 264 1 8 HELIX 46 46 THR B 276 GLY B 288 1 13 HELIX 47 47 ARG B 327 GLY B 337 1 11 HELIX 48 48 GLU B 339 LYS B 352 1 14 HELIX 49 49 ILE B 363 ILE B 367 5 5 HELIX 50 50 ASP B 368 SER B 383 1 16 HELIX 51 51 ASN B 393 ALA B 403 1 11 HELIX 52 52 ASP B 416 GLY B 431 1 16 HELIX 53 53 SER B 446 HIS B 464 1 19 HELIX 54 54 PHE B 466 ASP B 468 5 3 HELIX 55 55 PRO B 478 GLU B 482 5 5 HELIX 56 56 LYS B 484 LYS B 498 1 15 HELIX 57 57 GLY B 505 PHE B 511 5 7 HELIX 58 58 ASP B 515 LYS B 530 1 16 HELIX 59 59 ASP B 541 LEU B 555 1 15
SHEET 1 A 8 LEU A 16 LEU A 17 0 SHEET 2 A 8 ILE A 268 PHE A 269 1 O PHE A 269 N LEU A 16 SHEET 3 A 8 PHE A 228 GLU A 232 1 N VAL A 231 O ILE A 268 SHEET 4 A 8 ALA A 202 ASN A 206 1 N LEU A 203 O PHE A 228 SHEET 5 A 8 LEU A 170 MSE A 174 1 N ALA A 172 O ALA A 202 SHEET 6 A 8 ILE A 143 PHE A 148 1 N ILE A 143 O ILE A 171 SHEET 7 A 8 LEU A 101 ILE A 106 1 N GLY A 104 O ILE A 144 SHEET 8 A 8 VAL A 60 LEU A 62 1 N ILE A 61 O PHE A 103 SHEET 1 B 2 ILE A 239 VAL A 240 0 SHEET 2 B 2 THR A 245 VAL A 246 -1 O VAL A 246 N ILE A 239 SHEET 1 C 2 ALA A 302 SER A 304 0 SHEET 2 C 2 LEU A 309 THR A 311 -1 O VAL A 310 N VAL A 303 SHEET 1 D 7 VAL A 470 ASP A 473 0 SHEET 2 D 7 THR A 433 LEU A 437 1 N VAL A 436 O ASP A 473 SHEET 3 D 7 LEU A 409 LYS A 414 1 N PHE A 410 O ILE A 435 SHEET 4 D 7 LEU A 387 ASP A 390 1 N LEU A 389 O ASN A 411 SHEET 5 D 7 VAL A 356 ASN A 360 1 N LEU A 357 O SER A 388 SHEET 6 D 7 VAL A 316 ILE A 322 1 N GLY A 319 O ASP A 358 SHEET 7 D 7 SER A 534 MSE A 537 1 O ALA A 535 N ILE A 318 SHEET 1 E 8 LEU B 16 LEU B 17 0 SHEET 2 E 8 ILE B 268 PHE B 269 1 O PHE B 269 N LEU B 16 SHEET 3 E 8 PHE B 228 GLU B 232 1 N VAL B 231 O ILE B 268 SHEET 4 E 8 ALA B 202 ASN B 206 1 N LEU B 203 O PHE B 228 SHEET 5 E 8 LEU B 170 MSE B 174 1 N ALA B 172 O ALA B 202 SHEET 6 E 8 GLY B 142 PHE B 148 1 N ILE B 143 O ILE B 171 SHEET 7 E 8 LEU B 101 ILE B 106 1 N GLY B 104 O GLY B 142 SHEET 8 E 8 VAL B 60 LEU B 62 1 N ILE B 61 O PHE B 103 SHEET 1 F 2 ALA B 302 SER B 304 0 SHEET 2 F 2 LEU B 309 THR B 311 -1 O VAL B 310 N VAL B 303 SHEET 1 G 8 ASN B 501 THR B 502 0 SHEET 2 G 8 VAL B 470 ASP B 473 1 N PHE B 472 O ASN B 501 SHEET 3 G 8 THR B 433 LEU B 437 1 N VAL B 436 O ILE B 471 SHEET 4 G 8 LEU B 409 LYS B 414 1 N PHE B 410 O THR B 433 SHEET 5 G 8 LEU B 387 LEU B 389 1 N LEU B 389 O ASN B 411 SHEET 6 G 8 VAL B 356 VAL B 359 1 N LEU B 357 O SER B 388 SHEET 7 G 8 VAL B 316 ILE B 322 1 N GLY B 319 O ASP B 358 SHEET 8 G 8 SER B 534 MSE B 537 1 O MSE B 537 N ILE B 318
LINK C MSE A 1 N ARG A 2 1555 1555 1.32 LINK C PHE A 26 N MSE A 27 1555 1555 1.33 LINK C MSE A 27 N LYS A 28 1555 1555 1.33 LINK C ARG A 70 N MSE A 71 1555 1555 1.34 LINK C MSE A 71 N LYS A 72 1555 1555 1.33 LINK C ILE A 134 N MSE A 135 1555 1555 1.33 LINK C MSE A 135 N VAL A 136 1555 1555 1.34 LINK C HIS A 173 N MSE A 174 1555 1555 1.32 LINK C MSE A 174 N THR A 175 1555 1555 1.32 LINK C GLU A 333 N MSE A 334 1555 1555 1.33 LINK C MSE A 334 N GLN A 335 1555 1555 1.33 LINK C GLU A 421 N MSE A 422 1555 1555 1.33 LINK C MSE A 422 N LYS A 423 1555 1555 1.33 LINK C LEU A 438 N MSE A 439 1555 1555 1.32 LINK C MSE A 439 N GLY A 440 1555 1555 1.32 LINK C ILE A 536 N MSE A 537 1555 1555 1.32 LINK C MSE A 537 N ASN A 538 1555 1555 1.33 LINK C LEU A 544 N MSE A 545 1555 1555 1.33 LINK C MSE A 545 N LYS A 546 1555 1555 1.33 LINK C MSE B 1 N ARG B 2 1555 1555 1.33 LINK C PHE B 26 N MSE B 27 1555 1555 1.33 LINK C MSE B 27 N LYS B 28 1555 1555 1.33 LINK C ARG B 70 N MSE B 71 1555 1555 1.34 LINK C MSE B 71 N LYS B 72 1555 1555 1.33 LINK C ILE B 134 N MSE B 135 1555 1555 1.33 LINK C MSE B 135 N VAL B 136 1555 1555 1.33 LINK C HIS B 173 N MSE B 174 1555 1555 1.33 LINK C MSE B 174 N THR B 175 1555 1555 1.32 LINK C GLU B 333 N MSE B 334 1555 1555 1.33 LINK C MSE B 334 N GLN B 335 1555 1555 1.33 LINK C GLU B 421 N MSE B 422 1555 1555 1.33 LINK C MSE B 422 N LYS B 423 1555 1555 1.33 LINK C LEU B 438 N MSE B 439 1555 1555 1.33 LINK C ILE B 536 N MSE B 537 1555 1555 1.32 LINK C MSE B 537 N ASN B 538 1555 1555 1.34 LINK C LEU B 544 N MSE B 545 1555 1555 1.33 LINK C MSE B 545 N LYS B 546 1555 1555 1.34
CISPEP 1 TYR A 114 PRO A 115 0 1.79 CISPEP 2 TYR B 114 PRO B 115 0 0.41
SITE 1 AC1 4 CYS A 207 CYS A 272 CYS A 273 HCS A 701 SITE 1 AC2 5 CYS B 207 ASN B 234 CYS B 272 CYS B 273 SITE 2 AC2 5 HCS B 702 SITE 1 AC3 11 ALA A 21 TYR A 22 GLY A 23 ASP A 105 SITE 2 AC3 11 GLU A 146 THR A 147 CD A 601 HOH A 707 SITE 3 AC3 11 HOH A 713 HOH A 721 HOH A 769 SITE 1 AC4 11 ALA B 21 TYR B 22 GLY B 23 PHE B 66 SITE 2 AC4 11 ASP B 105 GLU B 146 THR B 147 CD B 602 SITE 3 AC4 11 HOH B 707 HOH B 715 HOH B 726
CRYST1 59.120 86.190 126.080 90.00 99.99 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016915 0.000000 0.002979 0.00000
SCALE2 0.000000 0.011602 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008054 0.00000