10 20 30 40 50 60 70 80 1Q3M - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER CALCIUM-BINDING PROTEIN 30-JUL-03 1Q3M
TITLE 1H NMR STRUCTURE BUNDLE OF BOVINE CA2+-OSTEOCALCIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: OSTEOCALCIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GAMMA-CARBOXYGLUTAMIC ACID-CONTAINING PROTEIN, COMPND 5 BONE GLA-PROTEIN, BGP
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 OTHER_DETAILS: BONE POWDER
KEYWDS BONE PROTEIN, CALCIUM BINDING PROTEIN, CALCIUM-BINDING KEYWDS 2 PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 13
AUTHOR T.L.DOWD,J.F.ROSEN,L.LI,C.M.GUNDBERG
REVDAT 2 24-FEB-09 1Q3M 1 VERSN REVDAT 1 16-SEP-03 1Q3M 0
JRNL AUTH T.L.DOWD,J.F.ROSEN,L.LI,C.M.GUNDBERG JRNL TITL THE THREE-DIMENSIONAL STRUCTURE OF BOVINE CALCIUM JRNL TITL 2 ION-BOUND OSTEOCALCIN USING 1H NMR SPECTROSCOPY JRNL REF BIOCHEMISTRY V. 42 7769 2003 JRNL REFN ISSN 0006-2960 JRNL PMID 12820886 JRNL DOI 10.1021/BI034470S
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, A.T. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1Q3M COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-AUG-03. REMARK 100 THE RCSB ID CODE IS RCSB019873.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 6.9 REMARK 210 IONIC STRENGTH : 38 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 20MM NACL, 6MM CA(CL)2, REMARK 210 0.25MM DSS REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : COSY, 17 AND 60 MS MIXING REMARK 210 TIME TOCSYS, NOESY (150 MS) REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX600 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA, TALOS, AQUA, PROCHECK REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING AND ENERGY REMARK 210 MINIMIZATION REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 13 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 2 REMARK 210 REMARK 210 REMARK: SINCE THE 15 N-TERMINAL RESIDUES ARE UNSTRUCTURED AND REMARK 210 NOT CONSTRAINED, ONLY THE STRUCTURED REGION OF THE MOLECULE REMARK 210 (RESIDUES 16-49) IS INCLUDED IN THE STRUCTURE BUNDLE. ALL OF REMARK 210 THE STRUCTURES WERE SOLVED IN THE PRESENCE OF 6 MM CACL2.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-13 REMARK 465 RES C SSSEQI REMARK 465 TYR A 1 REMARK 465 LEU A 2 REMARK 465 ASP A 3 REMARK 465 HIS A 4 REMARK 465 TRP A 5 REMARK 465 LEU A 6 REMARK 465 GLY A 7 REMARK 465 ALA A 8 REMARK 465 PRO A 9 REMARK 465 ALA A 10 REMARK 465 PRO A 11 REMARK 465 TYR A 12 REMARK 465 PRO A 13 REMARK 465 ASP A 14 REMARK 465 PRO A 15
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 36 -55.34 -146.45 REMARK 500 1 PHE A 38 -73.00 -120.00 REMARK 500 1 GLN A 39 -31.47 -179.60 REMARK 500 1 TYR A 46 -72.23 -138.12 REMARK 500 2 GLU A 40 40.32 -149.24 REMARK 500 2 TYR A 46 -74.22 -139.80 REMARK 500 2 PRO A 48 104.50 -58.28 REMARK 500 3 LYS A 19 44.88 -155.08 REMARK 500 3 ILE A 36 -54.02 -141.08 REMARK 500 3 TYR A 46 -63.87 -139.97 REMARK 500 3 PRO A 48 104.34 -47.43 REMARK 500 4 LYS A 19 68.79 -111.66 REMARK 500 4 PRO A 27 103.78 -51.64 REMARK 500 4 ASP A 28 -53.48 -146.57 REMARK 500 4 ILE A 36 -55.20 -140.05 REMARK 500 4 TYR A 46 -62.63 -140.25 REMARK 500 5 PRO A 27 87.58 -46.04 REMARK 500 5 ASP A 28 -58.75 -127.70 REMARK 500 5 ILE A 36 -50.79 -138.62 REMARK 500 5 TYR A 46 -71.60 -142.26 REMARK 500 6 ASP A 28 -66.26 -156.22 REMARK 500 6 ALA A 33 46.63 -84.18 REMARK 500 6 ASP A 34 -55.74 -131.64 REMARK 500 6 ILE A 36 -43.98 -134.38 REMARK 500 6 TYR A 46 -64.94 -141.41 REMARK 500 7 TYR A 46 -67.54 -138.50 REMARK 500 8 ILE A 36 -56.78 -146.78 REMARK 500 8 PHE A 38 -89.76 -109.81 REMARK 500 8 GLN A 39 43.17 -172.23 REMARK 500 8 TYR A 46 -63.64 -139.58 REMARK 500 9 LYS A 19 30.20 -145.48 REMARK 500 9 GLU A 31 49.38 -94.52 REMARK 500 9 ILE A 36 -55.17 -144.25 REMARK 500 9 PHE A 38 -84.39 -116.16 REMARK 500 9 GLN A 39 -33.94 170.59 REMARK 500 9 TYR A 46 -72.67 -138.68 REMARK 500 10 LYS A 19 26.32 -142.06 REMARK 500 10 HIS A 35 -42.48 -154.46 REMARK 500 10 ILE A 36 58.98 -102.48 REMARK 500 10 TYR A 46 -63.11 -139.80 REMARK 500 11 LYS A 19 32.77 -150.56 REMARK 500 11 ILE A 36 -55.91 -142.04 REMARK 500 11 TYR A 46 -68.03 -138.47 REMARK 500 12 PRO A 27 106.95 -53.49 REMARK 500 12 ASP A 28 -57.88 -159.56 REMARK 500 12 ILE A 36 -56.93 -143.79 REMARK 500 12 PHE A 38 -90.89 -117.72 REMARK 500 12 GLN A 39 40.39 -174.79 REMARK 500 12 TYR A 46 -62.82 -142.79 REMARK 500 13 ILE A 36 -54.99 -141.73 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1Q3M A 1 49 UNP P02820 OSTC_BOVIN 52 100
SEQADV 1Q3M CGU A 17 UNP P02820 GLU 68 MODIFIED RESIDUE SEQADV 1Q3M CGU A 21 UNP P02820 GLU 72 MODIFIED RESIDUE SEQADV 1Q3M CGU A 24 UNP P02820 GLU 75 MODIFIED RESIDUE
SEQRES 1 A 49 TYR LEU ASP HIS TRP LEU GLY ALA PRO ALA PRO TYR PRO SEQRES 2 A 49 ASP PRO LEU CGU PRO LYS ARG CGU VAL CYS CGU LEU ASN SEQRES 3 A 49 PRO ASP CYS ASP GLU LEU ALA ASP HIS ILE GLY PHE GLN SEQRES 4 A 49 GLU ALA TYR ARG ARG PHE TYR GLY PRO VAL
MODRES 1Q3M CGU A 17 GLU GAMMA-CARBOXY-GLUTAMIC ACID MODRES 1Q3M CGU A 21 GLU GAMMA-CARBOXY-GLUTAMIC ACID MODRES 1Q3M CGU A 24 GLU GAMMA-CARBOXY-GLUTAMIC ACID
HET CGU A 17 17 HET CGU A 21 17 HET CGU A 24 17
HETNAM CGU GAMMA-CARBOXY-GLUTAMIC ACID
FORMUL 1 CGU 3(C6 H9 N O6)
HELIX 1 1 ASN A 26 GLU A 31 1 6 HELIX 2 2 GLU A 31 ILE A 36 1 6 HELIX 3 3 GLN A 39 PHE A 45 1 7
SSBOND 1 CYS A 23 CYS A 29 1555 1555 2.03
LINK C LEU A 16 N CGU A 17 1555 1555 1.33 LINK C CGU A 17 N PRO A 18 1555 1555 1.35 LINK C ARG A 20 N CGU A 21 1555 1555 1.34 LINK C CGU A 21 N VAL A 22 1555 1555 1.34 LINK C CYS A 23 N CGU A 24 1555 1555 1.34 LINK C CGU A 24 N LEU A 25 1555 1555 1.34
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000