10 20 30 40 50 60 70 80 1Q2G - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL PROTEIN/CHAPERONE 24-JUL-03 1Q2G
TITLE MODEL STRUCTURE OF THE HSC70/AUXILIN COMPLEX
COMPND MOL_ID: 1; COMPND 2 MOLECULE: AUXILIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: J-DOMAIN AND CLATHRIN BINDING REGIONS; COMPND 5 SYNONYM: DNAJ (HSP40) HOMOLOG, SUBFAMILY C, MEMBER 6; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNAK-TYPE MOLECULAR CHAPERONE HSC70; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: ATPASE DOMAIN; COMPND 10 SYNONYM: HEAT SHOCK PROTEIN 70 COGNATE; HEAT SHOCK COGNATE COMPND 11 71 KDA PROTEIN; HEAT SHOCK 70 KDA PROTEIN 8; COMPND 12 EC: 3.6.1.3; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNAK-TYPE MOLECULAR CHAPERONE HSP72-PS1; COMPND 15 CHAIN: C; COMPND 16 FRAGMENT: SUBSTRATE BINDING DOMAIN; COMPND 17 SYNONYM: HSC70-PS1
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 6 ORGANISM_COMMON: BOVINE; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 9 ORGANISM_COMMON: RAT
KEYWDS PROTEIN COMPLEX
EXPDTA THEORETICAL MODEL
AUTHOR J.M.GRUSCHUS,L.E.GREENE,E.EISENBERG,J.M.FERRETTI
REVDAT 1 05-AUG-03 1Q2G 0
JRNL AUTH J.M.GRUSCHUS,L.E.GREENE,E.EISENBERG,J.M.FERRETTI JRNL TITL MODEL STRUCTURE OF THE HSC70/AUXILIN COMPLEX JRNL REF TO BE PUBLISHED 2003 JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DISCOVER 00.1 REMARK 3 AUTHORS : ACCELRYS (SAN DIEGO) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: AMBER FORCEFIELD
REMARK 4 REMARK 4 1Q2G COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PRAGUE ON 22-JUL-2003. REMARK 100 THE RCSB ID CODE IS RCSB019831.
REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: MOLECULAR DYNAMICS BASED ON THE BEST EXPERIMENTAL, REMARK 220 ENERGETIC AND MECHANISTIC AGREEMENT. AMBER FORCEFIELD, REMARK 220 DISCOVER 00.1,PVT AT 300K, SEMI-RIGID OR TETHERED REMARK 220 BACKBONE, FLEXIBLE SIDE CHAINS, UNSOLVATED, DISTANCE REMARK 220 DEPENDENT DIELECTRIC
REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 C SER B 381 O OH 9382 1.36 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 810 CB - CG - CD ANGL. DEV. = 36.9 DEGREES REMARK 500 ASN B 151 C - N - CA ANGL. DEV. = 11.6 DEGREES REMARK 500 ILE C 480 C - N - CA ANGL. DEV. = 15.4 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 69 -83.08 98.55 REMARK 500 ALA B 70 -75.39 65.64 REMARK 500 ILE B 74 -95.47 58.91 REMARK 500 PHE B 150 151.65 84.45 REMARK 500 ASP B 214 -73.15 66.67 REMARK 500 SER C 432 155.41 93.32 REMARK 500 ALA C 448 80.41 133.49 REMARK 500 THR C 450 -108.18 45.56 REMARK 500 LYS C 451 -141.49 20.76 REMARK 500 ALA C 482 -78.35 38.32
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1N4C RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE J-DOMAIN AND CLATHRIN SUBSTRATE REMARK 900 BINDING DOMAIN OF BOVINE AUXILIN REMARK 900 RELATED ID: 1HPM RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF BOVINE HSC70 44K ATPASE N-TERMINAL REMARK 900 FRAGMENT REMARK 900 RELATED ID: 7HSC RELATED DB: PDB REMARK 900 NMR STRUCTURE OF RAT HSC70 SUBSTRATE BINDING DOMAIN
DBREF 1Q2G A 776 910 UNP Q27974 AUXI_BOVIN 776 910 DBREF 1Q2G B 4 381 UNP P19120 HS7C_BOVIN 4 381 DBREF 1Q2G C 385 543 EMBL 56385 CAA49670 385 543
SEQRES 1 A 135 ALA ALA ASP PHE GLU ASP LEU LEU SER GLY GLN GLY PHE SEQRES 2 A 135 ASN ALA HIS LYS ASP LYS LYS GLY PRO ARG THR ILE ALA SEQRES 3 A 135 GLU MET ARG LYS GLU GLU MET ALA LYS GLU MET ASP PRO SEQRES 4 A 135 GLU LYS LEU LYS ILE LEU GLU TRP ILE GLU GLY LYS GLU SEQRES 5 A 135 ARG ASN ILE ARG ALA LEU LEU SER THR MET HIS THR VAL SEQRES 6 A 135 LEU TRP ALA GLY GLU THR LYS TRP LYS PRO VAL GLY MET SEQRES 7 A 135 ALA ASP LEU VAL THR PRO GLU GLN VAL LYS LYS VAL TYR SEQRES 8 A 135 ARG LYS ALA VAL LEU VAL VAL HIS PRO ASP LYS ALA THR SEQRES 9 A 135 GLY GLN PRO TYR GLU GLN TYR ALA LYS MET ILE PHE MET SEQRES 10 A 135 GLU LEU ASN ASP ALA TRP SER GLU PHE GLU ASN GLN GLY SEQRES 11 A 135 GLN LYS PRO LEU TYR SEQRES 1 B 378 GLY PRO ALA VAL GLY ILE ASP LEU GLY THR THR TYR SER SEQRES 2 B 378 CYS VAL GLY VAL PHE GLN HIS GLY LYS VAL GLU ILE ILE SEQRES 3 B 378 ALA ASN ASP GLN GLY ASN ARG THR THR PRO SER TYR VAL SEQRES 4 B 378 ALA PHE THR ASP THR GLU ARG LEU ILE GLY ASP ALA ALA SEQRES 5 B 378 LYS ASN GLN VAL ALA MET ASN PRO THR ASN THR VAL PHE SEQRES 6 B 378 ASP ALA LYS ARG LEU ILE GLY ARG ARG PHE ASP ASP ALA SEQRES 7 B 378 VAL VAL GLN SER ASP MET LYS HIS TRP PRO PHE MET VAL SEQRES 8 B 378 VAL ASN ASP ALA GLY ARG PRO LYS VAL GLN VAL GLU TYR SEQRES 9 B 378 LYS GLY GLU THR LYS SER PHE TYR PRO GLU GLU VAL SER SEQRES 10 B 378 SER MET VAL LEU THR LYS MET LYS GLU ILE ALA GLU ALA SEQRES 11 B 378 TYR LEU GLY LYS THR VAL THR ASN ALA VAL VAL THR VAL SEQRES 12 B 378 PRO ALA TYR PHE ASN ASP SER GLN ARG GLN ALA THR LYS SEQRES 13 B 378 ASP ALA GLY THR ILE ALA GLY LEU ASN VAL LEU ARG ILE SEQRES 14 B 378 ILE ASN GLU PRO THR ALA ALA ALA ILE ALA TYR GLY LEU SEQRES 15 B 378 ASP LYS LYS VAL GLY ALA GLU ARG ASN VAL LEU ILE PHE SEQRES 16 B 378 ASP LEU GLY GLY GLY THR PHE ASP VAL SER ILE LEU THR SEQRES 17 B 378 ILE GLU ASP GLY ILE PHE GLU VAL LYS SER THR ALA GLY SEQRES 18 B 378 ASP THR HIS LEU GLY GLY GLU ASP PHE ASP ASN ARG MET SEQRES 19 B 378 VAL ASN HIS PHE ILE ALA GLU PHE LYS ARG LYS HIS LYS SEQRES 20 B 378 LYS ASP ILE SER GLU ASN LYS ARG ALA VAL ARG ARG LEU SEQRES 21 B 378 ARG THR ALA CYS GLU ARG ALA LYS ARG THR LEU SER SER SEQRES 22 B 378 SER THR GLN ALA SER ILE GLU ILE ASP SER LEU TYR GLU SEQRES 23 B 378 GLY ILE ASP PHE TYR THR SER ILE THR ARG ALA ARG PHE SEQRES 24 B 378 GLU GLU LEU ASN ALA ASP LEU PHE ARG GLY THR LEU ASP SEQRES 25 B 378 PRO VAL GLU LYS ALA LEU ARG ASP ALA LYS LEU ASP LYS SEQRES 26 B 378 SER GLN ILE HIS ASP ILE VAL LEU VAL GLY GLY SER THR SEQRES 27 B 378 ARG ILE PRO LYS ILE GLN LYS LEU LEU GLN ASP PHE PHE SEQRES 28 B 378 ASN GLY LYS GLU LEU ASN LYS SER ILE ASN PRO ASP GLU SEQRES 29 B 378 ALA VAL ALA TYR GLY ALA ALA VAL GLN ALA ALA ILE LEU SEQRES 30 B 378 SER SEQRES 1 C 159 SER GLU ASN VAL GLN ASP LEU LEU LEU LEU ASP VAL THR SEQRES 2 C 159 PRO LEU SER LEU GLY ILE GLU THR ALA GLY GLY VAL MET SEQRES 3 C 159 THR VAL LEU ILE LYS ARG ASN THR THR ILE PRO THR LYS SEQRES 4 C 159 GLN THR GLN THR PHE THR THR TYR SER ASP ASN GLN PRO SEQRES 5 C 159 GLY VAL LEU ILE GLN VAL TYR GLU GLY GLU ARG ALA MET SEQRES 6 C 159 THR LYS ASP ASN ASN LEU LEU GLY LYS PHE GLU LEU THR SEQRES 7 C 159 GLY ILE PRO PRO ALA PRO ARG GLY VAL PRO GLN ILE GLU SEQRES 8 C 159 VAL THR PHE ASP ILE ASP ALA ASN GLY ILE LEU ASN VAL SEQRES 9 C 159 SER ALA VAL ASP LYS SER THR GLY LYS GLU ASN LYS ILE SEQRES 10 C 159 THR ILE THR ASN ASP LYS GLY ARG LEU SER LYS GLU ASP SEQRES 11 C 159 ILE GLU ARG MET VAL GLN GLU ALA GLU LYS TYR LYS ALA SEQRES 12 C 159 GLU ASP GLU LYS GLN ARG ASP LYS VAL SER SER LYS ASN SEQRES 13 C 159 SER LEU GLU
HET OH 9382 2 HET CL 385 1 HET MG 487 1 HET PO4 488 5 HET K 490 1 HET K 491 1 HET ADP 486 39
HETNAM OH HYDROXIDE ION HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM PO4 PHOSPHATE ION HETNAM K POTASSIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE
FORMUL 4 OH H O 1- FORMUL 5 CL CL 1- FORMUL 6 MG MG 2+ FORMUL 7 PO4 O4 P 3- FORMUL 8 K 2(K 1+) FORMUL 10 ADP C10 H15 N5 O10 P2 FORMUL 11 HOH *12(H2 O1)
HELIX 1 1 ALA A 776 SER A 784 1 9 HELIX 2 2 ILE A 800 LYS A 810 1 11 HELIX 3 3 ASP A 813 GLY A 825 1 13 HELIX 4 4 ASN A 829 MET A 837 1 9 HELIX 5 5 HIS A 838 LEU A 841 5 4 HELIX 6 6 MET A 853 VAL A 857 5 5 HELIX 7 7 THR A 858 VAL A 873 1 16 HELIX 8 8 HIS A 874 THR A 879 1 6 HELIX 9 9 TYR A 883 GLY A 905 1 23 HELIX 10 10 GLY B 52 ASN B 57 1 6 HELIX 11 11 GLN B 58 ASN B 62 5 5 HELIX 12 12 ASP B 80 LYS B 88 1 9 HELIX 13 13 TYR B 115 GLY B 136 1 22 HELIX 14 14 GLN B 156 GLY B 166 1 11 HELIX 15 15 ASN B 174 GLY B 184 1 11 HELIX 16 16 GLY B 229 LYS B 250 1 22 HELIX 17 17 ASN B 256 SER B 277 1 22 HELIX 18 18 ARG B 299 ASN B 306 1 8 HELIX 19 19 ASN B 306 THR B 313 1 8 HELIX 20 20 THR B 313 ALA B 324 1 12 HELIX 21 21 ASP B 327 ILE B 331 5 5 HELIX 22 22 GLY B 338 ARG B 342 5 5 HELIX 23 23 ILE B 343 PHE B 354 1 12 HELIX 24 24 GLU B 367 SER B 381 1 15 HELIX 25 25 SER C 385 LEU C 391 1 7 HELIX 26 26 ILE C 515 GLN C 520 1 6 HELIX 27 27 GLU C 523 GLU C 528 1 6
SHEET 1 A 3 LYS B 25 ILE B 28 0 SHEET 2 A 3 TYR B 15 GLN B 22 -1 N VAL B 20 O GLU B 27 SHEET 3 A 3 THR B 38 PRO B 39 -1 O THR B 38 N SER B 16 SHEET 1 B 4 LYS B 25 ILE B 28 0 SHEET 2 B 4 TYR B 15 GLN B 22 -1 N VAL B 20 O GLU B 27 SHEET 3 B 4 VAL B 7 ASP B 10 -1 N ASP B 10 O CYS B 17 SHEET 4 B 4 ALA B 142 VAL B 144 1 O VAL B 143 N VAL B 7 SHEET 1 C 3 ARG B 49 ILE B 51 0 SHEET 2 C 3 VAL B 42 PHE B 44 -1 N ALA B 43 O LEU B 50 SHEET 3 C 3 THR B 66 VAL B 67 -1 O VAL B 67 N VAL B 42 SHEET 1 D 3 MET B 93 ASP B 97 0 SHEET 2 D 3 ARG B 100 GLU B 106 -1 O GLN B 104 N MET B 93 SHEET 3 D 3 THR B 111 PHE B 114 -1 O LYS B 112 N VAL B 105 SHEET 1 E 4 ILE B 216 ASP B 225 0 SHEET 2 E 4 PHE B 205 GLU B 213 -1 N THR B 211 O GLU B 218 SHEET 3 E 4 ARG B 193 LEU B 200 -1 N ASP B 199 O ASP B 206 SHEET 4 E 4 ASP B 333 VAL B 337 1 O ASP B 333 N LEU B 196 SHEET 1 F 2 GLN B 279 TYR B 288 0 SHEET 2 F 2 ILE B 291 THR B 298 -1 O PHE B 293 N ILE B 284 SHEET 1 G 3 GLU C 404 THR C 405 0 SHEET 2 G 3 ILE C 440 TYR C 443 -1 O GLN C 441 N GLU C 404 SHEET 3 G 3 LEU C 455 LEU C 456 -1 O LEU C 456 N VAL C 442 SHEET 1 H 3 GLN C 424 THR C 425 0 SHEET 2 H 3 GLN C 473 PHE C 478 -1 O PHE C 478 N GLN C 424 SHEET 3 H 3 PHE C 428 THR C 429 -1 N PHE C 428 O ILE C 474 SHEET 1 I 4 GLN C 424 THR C 425 0 SHEET 2 I 4 GLN C 473 PHE C 478 -1 O PHE C 478 N GLN C 424 SHEET 3 I 4 VAL C 488 ASP C 492 -1 O SER C 489 N THR C 477 SHEET 4 I 4 GLU C 498 ASN C 499 -1 O ASN C 499 N ALA C 490
CISPEP 1 GLY B 4 PRO B 5 0 0.88 CISPEP 2 PRO B 5 ALA B 6 0 4.43 CISPEP 3 PHE B 150 ASN B 151 0 14.65 CISPEP 4 LEU C 394 ASP C 395 0 2.73 CISPEP 5 ILE C 420 PRO C 421 0 15.44 CISPEP 6 ALA C 448 MET C 449 0 -13.44 CISPEP 7 ASP C 479 ILE C 480 0 19.76
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000