10 20 30 40 50 60 70 80 1PYV - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 09-JUL-03 1PYV
TITLE NMR SOLUTION STRUCTURE OF THE MITOCHONDRIAL F1B PRESEQUENCE TITLE 2 PEPTIDE FROM NICOTIANA PLUMBAGINIFOLIA
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECURSOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: F1B PRESEQUENCE PEPTIDE; COMPND 5 EC: 3.6.3.14; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA PLUMBAGINIFOLIA; SOURCE 3 ORGANISM_COMMON: CURLED-LEAVED TOBACCO; SOURCE 4 ORGANISM_TAXID: 4092; SOURCE 5 GENE: ATPB OR ATP2-1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21D
KEYWDS HYDROLASE
EXPDTA SOLUTION NMR
NUMMDL 24
AUTHOR P.MOBERG,S.NILSSON,A.STAHL,A.C.ERIKSSON,E.GLASER,L.MALER
REVDAT 2 24-FEB-09 1PYV 1 VERSN REVDAT 1 06-APR-04 1PYV 0
JRNL AUTH P.MOBERG,S.NILSSON,A.STAHL,A.C.ERIKSSON,E.GLASER, JRNL AUTH 2 L.MALER JRNL TITL NMR SOLUTION STRUCTURE OF THE MITOCHONDRIAL F1BETA JRNL TITL 2 PRESEQUENCE FROM NICOTIANA PLUMBAGINIFOLIA JRNL REF J.MOL.BIOL. V. 336 1129 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 15037074 JRNL DOI 10.1016/J.JMB.2004.01.006
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE IS BASED ON A TOTAL OF REMARK 3 539 RESTRAINTS: 518 NOE-DERIVED DISTANCE CONSTRAINTS, AND 21 REMARK 3 PHI DIHEDRAL ANGLE RESTRAINTS FROM J-COUPLINGS.
REMARK 4 REMARK 4 1PYV COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUL-03. REMARK 100 THE RCSB ID CODE IS RCSB019706.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 318 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 300 MM SDS REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM F1B PRESEQUENCE, 300 MM REMARK 210 SODIUM DODECYL PHOSPHATE, 30 REMARK 210 UL D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 2D TOCSY, DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ, 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA, AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN, BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 2000.1, DYANA 1.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 24 REMARK 210 CONFORMERS, SELECTION CRITERIA : COMBINATION OF LOWEST ENERGY REMARK 210 AND RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-24 REMARK 465 RES C SSSEQI REMARK 465 MET A 0
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 3 -62.03 70.49 REMARK 500 1 ILE A 21 -31.43 166.84 REMARK 500 1 SER A 24 -88.48 -44.72 REMARK 500 1 SER A 28 52.55 -150.82 REMARK 500 1 SER A 32 34.12 74.57 REMARK 500 1 ARG A 35 53.86 -92.68 REMARK 500 1 ALA A 36 -95.47 -158.36 REMARK 500 1 SER A 37 -68.63 72.77 REMARK 500 2 SER A 2 -174.71 163.08 REMARK 500 2 ARG A 4 -39.21 -38.95 REMARK 500 2 LEU A 20 41.35 -90.33 REMARK 500 2 ILE A 21 -45.01 -158.03 REMARK 500 2 SER A 24 -92.42 -50.13 REMARK 500 2 SER A 34 -38.50 -39.58 REMARK 500 2 ARG A 35 71.67 -117.08 REMARK 500 2 SER A 38 -56.18 82.15 REMARK 500 3 SER A 28 61.13 -159.77 REMARK 500 3 LYS A 31 -55.87 179.14 REMARK 500 3 ARG A 35 56.97 -155.03 REMARK 500 3 ALA A 36 -74.78 -105.52 REMARK 500 3 SER A 37 80.63 54.10 REMARK 500 3 SER A 38 -56.90 177.38 REMARK 500 3 ARG A 39 30.94 -168.21 REMARK 500 4 ARG A 16 -92.52 -155.77 REMARK 500 4 ARG A 23 -45.80 -141.10 REMARK 500 4 SER A 24 -94.89 -51.55 REMARK 500 4 SER A 28 68.14 -161.24 REMARK 500 4 LYS A 31 -61.47 169.07 REMARK 500 4 ARG A 35 50.05 -158.01 REMARK 500 4 ALA A 36 -100.30 -146.42 REMARK 500 4 SER A 37 -171.71 75.25 REMARK 500 4 SER A 38 -64.88 78.36 REMARK 500 5 SER A 2 114.45 -179.73 REMARK 500 5 ARG A 3 -47.36 -139.19 REMARK 500 5 ARG A 16 85.06 38.83 REMARK 500 5 SER A 22 -85.80 -39.23 REMARK 500 5 ARG A 23 24.30 -142.55 REMARK 500 5 SER A 24 -81.22 -84.70 REMARK 500 5 ALA A 33 29.78 46.53 REMARK 500 5 SER A 37 -41.64 -168.91 REMARK 500 6 SER A 28 68.02 174.69 REMARK 500 6 LYS A 31 -57.40 164.29 REMARK 500 6 ARG A 35 -44.61 -155.15 REMARK 500 6 ALA A 36 -91.83 -47.81 REMARK 500 6 SER A 37 151.90 80.46 REMARK 500 6 SER A 38 -70.67 83.36 REMARK 500 7 ARG A 3 -61.61 75.51 REMARK 500 7 LEU A 5 -75.43 -57.48 REMARK 500 7 ARG A 16 -98.29 -163.77 REMARK 500 7 SER A 24 -78.50 -50.16 REMARK 500 7 SER A 34 -85.94 -37.13 REMARK 500 7 ARG A 35 -78.67 -64.84 REMARK 500 7 ALA A 36 77.03 40.44 REMARK 500 7 SER A 38 -71.20 77.64 REMARK 500 8 ARG A 3 -74.03 160.83 REMARK 500 8 ARG A 16 41.80 37.45 REMARK 500 8 SER A 22 -73.82 -39.10 REMARK 500 8 ARG A 23 25.37 -155.54 REMARK 500 8 SER A 24 -85.22 -85.12 REMARK 500 8 ASN A 27 -29.88 -40.00 REMARK 500 8 ARG A 35 55.32 -163.76 REMARK 500 8 ALA A 36 -98.20 -124.22 REMARK 500 8 SER A 37 -174.72 67.57 REMARK 500 8 SER A 38 -62.01 73.55 REMARK 500 9 SER A 2 71.70 42.37 REMARK 500 9 ILE A 21 -46.55 -135.42 REMARK 500 9 SER A 28 68.94 -170.17 REMARK 500 9 ALA A 36 -98.45 -145.01 REMARK 500 9 SER A 37 171.10 66.14 REMARK 500 9 SER A 38 -53.62 85.28 REMARK 500 9 ARG A 39 57.56 -158.65 REMARK 500 10 SER A 2 90.27 39.47 REMARK 500 10 LEU A 5 -70.61 -62.84 REMARK 500 10 ARG A 16 51.56 38.90 REMARK 500 10 ARG A 23 -47.28 -141.29 REMARK 500 10 SER A 34 -30.38 -38.67 REMARK 500 10 ARG A 35 -79.49 -144.87 REMARK 500 10 ALA A 36 79.27 40.37 REMARK 500 10 SER A 38 -71.97 80.32 REMARK 500 11 ARG A 16 73.27 38.25 REMARK 500 11 SER A 22 -86.89 -41.30 REMARK 500 11 SER A 24 -94.55 -82.14 REMARK 500 11 LEU A 25 47.93 -84.98 REMARK 500 11 ALA A 36 65.06 39.12 REMARK 500 11 SER A 37 -52.39 -175.12 REMARK 500 11 SER A 38 76.74 -66.48 REMARK 500 12 ARG A 23 28.93 -164.78 REMARK 500 12 ALA A 33 47.39 72.54 REMARK 500 12 SER A 34 -37.95 -36.15 REMARK 500 12 ARG A 35 -93.59 -144.02 REMARK 500 12 ALA A 36 100.91 62.12 REMARK 500 12 SER A 37 -57.76 -175.39 REMARK 500 13 ARG A 3 -60.86 78.24 REMARK 500 13 ARG A 16 85.26 38.79 REMARK 500 13 SER A 24 -72.93 -84.61 REMARK 500 13 LEU A 25 48.79 -84.13 REMARK 500 13 SER A 28 53.23 -145.74 REMARK 500 13 ALA A 36 -93.43 -93.60 REMARK 500 13 SER A 37 146.65 67.69 REMARK 500 13 SER A 38 -59.01 78.05 REMARK 500 14 ARG A 3 -60.19 69.72 REMARK 500 14 ARG A 23 37.33 179.01 REMARK 500 14 SER A 24 -72.41 -79.42 REMARK 500 14 SER A 28 63.11 177.60 REMARK 500 14 LYS A 31 -59.34 175.51 REMARK 500 14 ALA A 33 -30.09 -39.91 REMARK 500 14 ARG A 35 68.75 64.42 REMARK 500 14 SER A 37 -168.58 85.26 REMARK 500 14 ARG A 39 75.74 89.25 REMARK 500 15 SER A 2 -67.73 -160.40 REMARK 500 15 ARG A 16 91.37 56.49 REMARK 500 15 ILE A 21 -47.08 -143.44 REMARK 500 15 SER A 24 -89.17 -66.07 REMARK 500 15 SER A 28 78.21 -166.72 REMARK 500 15 ARG A 35 57.21 -157.86 REMARK 500 15 ALA A 36 -99.21 -118.15 REMARK 500 15 SER A 37 -176.78 65.17 REMARK 500 15 SER A 38 -58.56 87.04 REMARK 500 15 ARG A 39 27.03 -161.93 REMARK 500 16 SER A 2 130.51 -178.65 REMARK 500 16 SER A 24 -86.82 -53.92 REMARK 500 16 SER A 32 33.14 71.41 REMARK 500 16 SER A 34 -34.98 -39.45 REMARK 500 16 ARG A 35 64.82 -109.91 REMARK 500 16 ALA A 36 107.61 162.53 REMARK 500 16 SER A 38 -48.53 84.94 REMARK 500 17 SER A 2 118.72 -172.74 REMARK 500 17 ARG A 23 -56.23 -127.51 REMARK 500 17 SER A 34 -34.65 -38.85 REMARK 500 17 ALA A 36 63.93 -108.27 REMARK 500 17 SER A 37 -174.56 -59.10 REMARK 500 18 LEU A 5 -77.85 -54.09 REMARK 500 18 ILE A 21 -44.75 -159.95 REMARK 500 18 ARG A 23 26.68 -157.51 REMARK 500 18 SER A 24 -96.06 -75.05 REMARK 500 18 SER A 28 83.52 -154.24 REMARK 500 18 ARG A 35 60.35 -119.98 REMARK 500 18 ALA A 36 -96.20 -175.48 REMARK 500 18 SER A 38 -40.82 -179.87 REMARK 500 19 ARG A 16 -31.39 -38.21 REMARK 500 19 ARG A 23 -45.82 -146.91 REMARK 500 19 SER A 24 -89.87 -43.15 REMARK 500 19 ALA A 33 48.04 71.92 REMARK 500 19 ARG A 35 -79.53 -113.31 REMARK 500 19 ALA A 36 80.58 46.01 REMARK 500 19 SER A 37 -149.83 -120.93 REMARK 500 19 SER A 38 82.81 -60.04 REMARK 500 19 ARG A 39 -29.31 160.26 REMARK 500 20 ARG A 3 -57.53 74.46 REMARK 500 20 ARG A 16 51.23 -118.44 REMARK 500 20 ILE A 21 -45.27 -150.67 REMARK 500 20 SER A 22 -72.64 -36.86 REMARK 500 20 SER A 24 -82.19 -85.24 REMARK 500 20 ARG A 35 47.88 -106.00 REMARK 500 20 ALA A 36 -98.25 -161.27 REMARK 500 20 SER A 38 -41.22 175.01 REMARK 500 20 ARG A 39 34.57 -142.97 REMARK 500 21 ARG A 3 -57.53 74.46 REMARK 500 21 ARG A 16 51.23 -118.44 REMARK 500 21 ILE A 21 -45.27 -150.67 REMARK 500 21 SER A 22 -72.64 -36.86 REMARK 500 21 SER A 24 -82.19 -85.24 REMARK 500 21 ARG A 35 47.88 -106.00 REMARK 500 21 ALA A 36 -98.25 -161.27 REMARK 500 21 SER A 38 -41.22 175.01 REMARK 500 21 ARG A 39 34.57 -142.97 REMARK 500 22 ARG A 3 -57.53 74.46 REMARK 500 22 ARG A 16 51.23 -118.44 REMARK 500 22 ILE A 21 -45.27 -150.67 REMARK 500 22 SER A 22 -72.64 -36.86 REMARK 500 22 SER A 24 -82.19 -85.24 REMARK 500 22 ARG A 35 47.88 -106.00 REMARK 500 22 ALA A 36 -98.25 -161.27 REMARK 500 22 SER A 38 -41.22 175.01 REMARK 500 22 ARG A 39 34.57 -142.97 REMARK 500 23 ARG A 3 -57.53 74.46 REMARK 500 23 ARG A 16 51.23 -118.44 REMARK 500 23 ILE A 21 -45.27 -150.67 REMARK 500 23 SER A 22 -72.64 -36.86 REMARK 500 23 SER A 24 -82.19 -85.24 REMARK 500 23 ARG A 35 47.88 -106.00 REMARK 500 23 ALA A 36 -98.25 -161.27 REMARK 500 23 SER A 38 -41.22 175.01 REMARK 500 23 ARG A 39 34.57 -142.97 REMARK 500 24 ARG A 3 -57.53 74.46 REMARK 500 24 ARG A 16 51.23 -118.44 REMARK 500 24 ILE A 21 -45.27 -150.67 REMARK 500 24 SER A 22 -72.64 -36.86 REMARK 500 24 SER A 24 -82.19 -85.24 REMARK 500 24 ARG A 35 47.88 -106.00 REMARK 500 24 ALA A 36 -98.25 -161.27 REMARK 500 24 SER A 38 -41.22 175.01 REMARK 500 24 ARG A 39 34.57 -142.97 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1PYV A 0 53 UNP P17614 ATPBM_NICPL 1 54
SEQRES 1 A 54 MET ALA SER ARG ARG LEU LEU ALA SER LEU LEU ARG GLN SEQRES 2 A 54 SER ALA GLN ARG GLY GLY GLY LEU ILE SER ARG SER LEU SEQRES 3 A 54 GLY ASN SER ILE PRO LYS SER ALA SER ARG ALA SER SER SEQRES 4 A 54 ARG ALA SER PRO LYS GLY PHE LEU LEU ASN ARG ALA VAL SEQRES 5 A 54 GLN TYR
HELIX 1 1 ARG A 3 GLN A 15 1 13 HELIX 2 2 SER A 24 ILE A 29 5 6 HELIX 3 3 SER A 41 TYR A 53 1 13
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000