10 20 30 40 50 60 70 80 1PSC - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 25-APR-95 1PSC
TITLE PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOTRIESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BREVUNDIMONAS DIMINUTA; SOURCE 3 ORGANISM_TAXID: 293; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS HYDROLASE, PHOSPHORIC TRIESTER
EXPDTA X-RAY DIFFRACTION
AUTHOR M.M.BENNING,H.M.HOLDEN
REVDAT 2 24-FEB-09 1PSC 1 VERSN REVDAT 1 01-APR-97 1PSC 0
JRNL AUTH M.M.BENNING,J.M.KUO,F.M.RAUSHEL,H.M.HOLDEN JRNL TITL THREE-DIMENSIONAL STRUCTURE OF THE BINUCLEAR METAL JRNL TITL 2 CENTER OF PHOSPHOTRIESTERASE. JRNL REF BIOCHEMISTRY V. 34 7973 1995 JRNL REFN ISSN 0006-2960 JRNL PMID 7794910 JRNL DOI 10.1021/BI00025A002
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 49624 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5021 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 420 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.016 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.350 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1PSC COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49624 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 64.75000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.70000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 64.75000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.70000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 THR A 3 REMARK 465 ARG A 4 REMARK 465 ARG A 5 REMARK 465 VAL A 6 REMARK 465 VAL A 7 REMARK 465 LEU A 8 REMARK 465 LYS A 9 REMARK 465 SER A 10 REMARK 465 ALA A 11 REMARK 465 ALA A 12 REMARK 465 ALA A 13 REMARK 465 ALA A 14 REMARK 465 GLY A 15 REMARK 465 THR A 16 REMARK 465 LEU A 17 REMARK 465 LEU A 18 REMARK 465 GLY A 19 REMARK 465 GLY A 20 REMARK 465 LEU A 21 REMARK 465 ALA A 22 REMARK 465 GLY A 23 REMARK 465 CYS A 24 REMARK 465 ALA A 25 REMARK 465 SER A 26 REMARK 465 VAL A 27 REMARK 465 ALA A 28 REMARK 465 GLY A 29 REMARK 465 SER A 30 REMARK 465 ILE A 31 REMARK 465 GLY A 32 REMARK 465 THR A 33 REMARK 465 GLY A 34 REMARK 465 ALA A 364 REMARK 465 SER A 365 REMARK 465 MET B 1 REMARK 465 GLN B 2 REMARK 465 THR B 3 REMARK 465 ARG B 4 REMARK 465 ARG B 5 REMARK 465 VAL B 6 REMARK 465 VAL B 7 REMARK 465 LEU B 8 REMARK 465 LYS B 9 REMARK 465 SER B 10 REMARK 465 ALA B 11 REMARK 465 ALA B 12 REMARK 465 ALA B 13 REMARK 465 ALA B 14 REMARK 465 GLY B 15 REMARK 465 THR B 16 REMARK 465 LEU B 17 REMARK 465 LEU B 18 REMARK 465 GLY B 19 REMARK 465 GLY B 20 REMARK 465 LEU B 21 REMARK 465 ALA B 22 REMARK 465 GLY B 23 REMARK 465 CYS B 24 REMARK 465 ALA B 25 REMARK 465 SER B 26 REMARK 465 VAL B 27 REMARK 465 ALA B 28 REMARK 465 GLY B 29 REMARK 465 SER B 30 REMARK 465 ILE B 31 REMARK 465 GLY B 32 REMARK 465 THR B 33 REMARK 465 GLY B 34 REMARK 465 SER B 365
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 35 CG OD1 OD2 REMARK 470 ARG A 363 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 35 CG OD1 OD2 REMARK 470 ARG B 363 CG CD NE CZ NH1 NH2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 81 CD GLU A 81 OE1 0.073 REMARK 500 GLU A 115 CD GLU A 115 OE1 0.072 REMARK 500 ARG A 139 CZ ARG A 139 NH1 0.082 REMARK 500 GLU A 181 CD GLU A 181 OE1 0.070 REMARK 500 GLU A 338 CD GLU A 338 OE2 0.066 REMARK 500 GLU B 48 CD GLU B 48 OE1 0.068 REMARK 500 GLU B 181 CD GLU B 181 OE1 0.072 REMARK 500 GLU B 210 CD GLU B 210 OE1 0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 36 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 85 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP A 100 CB - CG - OD1 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP A 100 CB - CG - OD2 ANGL. DEV. = 7.6 DEGREES REMARK 500 ASP A 109 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP A 109 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG A 118 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP A 133 CB - CG - OD1 ANGL. DEV. = -7.6 DEGREES REMARK 500 ASP A 133 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG A 139 NH1 - CZ - NH2 ANGL. DEV. = -11.8 DEGREES REMARK 500 ARG A 139 NE - CZ - NH1 ANGL. DEV. = 14.3 DEGREES REMARK 500 ARG A 164 NE - CZ - NH1 ANGL. DEV. = 7.9 DEGREES REMARK 500 ARG A 207 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP A 208 CB - CG - OD1 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP A 208 CB - CG - OD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 ASP A 232 CB - CG - OD2 ANGL. DEV. = 7.4 DEGREES REMARK 500 ASP A 235 CB - CG - OD1 ANGL. DEV. = -6.9 DEGREES REMARK 500 ASP A 235 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 TYR A 239 CB - CG - CD2 ANGL. DEV. = -4.0 DEGREES REMARK 500 TYR A 239 CB - CG - CD1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ASP A 264 CB - CG - OD1 ANGL. DEV. = -7.1 DEGREES REMARK 500 ASP A 315 CB - CG - OD1 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG A 356 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG B 85 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 85 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 ASP B 100 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG B 108 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP B 109 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP B 109 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG B 118 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP B 121 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 121 CB - CG - OD2 ANGL. DEV. = -6.6 DEGREES REMARK 500 ARG B 139 NE - CZ - NH1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG B 139 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG B 152 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 152 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASP B 208 CB - CG - OD1 ANGL. DEV. = -6.9 DEGREES REMARK 500 ARG B 225 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG B 225 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ASP B 253 CB - CG - OD1 ANGL. DEV. = -5.4 DEGREES REMARK 500 ASP B 253 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG B 275 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG B 275 NE - CZ - NH2 ANGL. DEV. = -6.6 DEGREES REMARK 500 ARG B 280 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ASP B 301 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP B 315 CB - CG - OD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP B 323 CB - CG - OD1 ANGL. DEV. = -7.5 DEGREES REMARK 500 ASP B 323 CB - CG - OD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 ARG B 337 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 356 NE - CZ - NH1 ANGL. DEV. = 6.8 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 51 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 61 -142.66 -142.05 REMARK 500 TRP A 131 -144.90 -103.96 REMARK 500 GLU A 159 -129.01 52.12 REMARK 500 ALA A 203 79.77 -107.94 REMARK 500 SER B 61 -142.39 -142.53 REMARK 500 TRP B 131 -150.65 -106.46 REMARK 500 GLU B 159 -127.86 50.25 REMARK 500 GLU B 263 -18.30 -39.63 REMARK 500 SER B 308 33.42 -85.42 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1038 DISTANCE = 5.04 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 801 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 301 OD1 REMARK 620 2 FMT A 901 O2 176.3 REMARK 620 3 HOH A 912 O 84.9 94.6 REMARK 620 4 HIS A 55 NE2 84.8 98.6 119.6 REMARK 620 5 HIS A 57 NE2 87.6 89.5 120.6 118.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 802 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 912 O REMARK 620 2 HIS A 230 NE2 103.8 REMARK 620 3 FMT A 901 O1 106.2 90.6 REMARK 620 4 HIS A 201 ND1 150.9 88.2 99.9 REMARK 620 5 HOH A 985 O 68.5 79.6 167.0 88.3 REMARK 620 6 HOH A 905 O 74.4 156.9 112.2 84.2 78.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 803 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 FMT B 902 O1 REMARK 620 2 HOH B1004 O 93.9 REMARK 620 3 ASP B 301 OD1 173.7 84.6 REMARK 620 4 HIS B 57 NE2 85.8 116.6 89.4 REMARK 620 5 HIS B 55 NE2 103.2 122.0 82.7 119.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 804 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 201 ND1 REMARK 620 2 HIS B 230 NE2 91.7 REMARK 620 3 HOH B1002 O 88.4 84.4 REMARK 620 4 HOH B1003 O 87.9 165.6 81.2 REMARK 620 5 FMT B 902 O2 100.2 99.5 170.4 94.7 REMARK 620 6 HOH B1004 O 147.2 100.0 62.8 73.2 107.8 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 801 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 802 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 803 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 804 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EBP A 900 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EBP B 901 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 901 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT B 902
DBREF 1PSC A 1 365 UNP P0A434 OPD_BREDI 1 365 DBREF 1PSC B 1 365 UNP P0A434 OPD_BREDI 1 365
SEQRES 1 A 365 MET GLN THR ARG ARG VAL VAL LEU LYS SER ALA ALA ALA SEQRES 2 A 365 ALA GLY THR LEU LEU GLY GLY LEU ALA GLY CYS ALA SER SEQRES 3 A 365 VAL ALA GLY SER ILE GLY THR GLY ASP ARG ILE ASN THR SEQRES 4 A 365 VAL ARG GLY PRO ILE THR ILE SER GLU ALA GLY PHE THR SEQRES 5 A 365 LEU THR HIS GLU HIS ILE CYS GLY SER SER ALA GLY PHE SEQRES 6 A 365 LEU ARG ALA TRP PRO GLU PHE PHE GLY SER ARG LYS ALA SEQRES 7 A 365 LEU ALA GLU LYS ALA VAL ARG GLY LEU ARG ARG ALA ARG SEQRES 8 A 365 ALA ALA GLY VAL ARG THR ILE VAL ASP VAL SER THR PHE SEQRES 9 A 365 ASP ILE GLY ARG ASP VAL SER LEU LEU ALA GLU VAL SER SEQRES 10 A 365 ARG ALA ALA ASP VAL HIS ILE VAL ALA ALA THR GLY LEU SEQRES 11 A 365 TRP PHE ASP PRO PRO LEU SER MET ARG LEU ARG SER VAL SEQRES 12 A 365 GLU GLU LEU THR GLN PHE PHE LEU ARG GLU ILE GLN TYR SEQRES 13 A 365 GLY ILE GLU ASP THR GLY ILE ARG ALA GLY ILE ILE LYS SEQRES 14 A 365 VAL ALA THR THR GLY LYS ALA THR PRO PHE GLN GLU LEU SEQRES 15 A 365 VAL LEU LYS ALA ALA ALA ARG ALA SER LEU ALA THR GLY SEQRES 16 A 365 VAL PRO VAL THR THR HIS THR ALA ALA SER GLN ARG ASP SEQRES 17 A 365 GLY GLU GLN GLN ALA ALA ILE PHE GLU SER GLU GLY LEU SEQRES 18 A 365 SER PRO SER ARG VAL CYS ILE GLY HIS SER ASP ASP THR SEQRES 19 A 365 ASP ASP LEU SER TYR LEU THR ALA LEU ALA ALA ARG GLY SEQRES 20 A 365 TYR LEU ILE GLY LEU ASP HIS ILE PRO HIS SER ALA ILE SEQRES 21 A 365 GLY LEU GLU ASP ASN ALA SER ALA SER ALA LEU LEU GLY SEQRES 22 A 365 ILE ARG SER TRP GLN THR ARG ALA LEU LEU ILE LYS ALA SEQRES 23 A 365 LEU ILE ASP GLN GLY TYR MET LYS GLN ILE LEU VAL SER SEQRES 24 A 365 ASN ASP TRP LEU PHE GLY PHE SER SER TYR VAL THR ASN SEQRES 25 A 365 ILE MET ASP VAL MET ASP ARG VAL ASN PRO ASP GLY MET SEQRES 26 A 365 ALA PHE ILE PRO LEU ARG VAL ILE PRO PHE LEU ARG GLU SEQRES 27 A 365 LYS GLY VAL PRO GLN GLU THR LEU ALA GLY ILE THR VAL SEQRES 28 A 365 THR ASN PRO ALA ARG PHE LEU SER PRO THR LEU ARG ALA SEQRES 29 A 365 SER SEQRES 1 B 365 MET GLN THR ARG ARG VAL VAL LEU LYS SER ALA ALA ALA SEQRES 2 B 365 ALA GLY THR LEU LEU GLY GLY LEU ALA GLY CYS ALA SER SEQRES 3 B 365 VAL ALA GLY SER ILE GLY THR GLY ASP ARG ILE ASN THR SEQRES 4 B 365 VAL ARG GLY PRO ILE THR ILE SER GLU ALA GLY PHE THR SEQRES 5 B 365 LEU THR HIS GLU HIS ILE CYS GLY SER SER ALA GLY PHE SEQRES 6 B 365 LEU ARG ALA TRP PRO GLU PHE PHE GLY SER ARG LYS ALA SEQRES 7 B 365 LEU ALA GLU LYS ALA VAL ARG GLY LEU ARG ARG ALA ARG SEQRES 8 B 365 ALA ALA GLY VAL ARG THR ILE VAL ASP VAL SER THR PHE SEQRES 9 B 365 ASP ILE GLY ARG ASP VAL SER LEU LEU ALA GLU VAL SER SEQRES 10 B 365 ARG ALA ALA ASP VAL HIS ILE VAL ALA ALA THR GLY LEU SEQRES 11 B 365 TRP PHE ASP PRO PRO LEU SER MET ARG LEU ARG SER VAL SEQRES 12 B 365 GLU GLU LEU THR GLN PHE PHE LEU ARG GLU ILE GLN TYR SEQRES 13 B 365 GLY ILE GLU ASP THR GLY ILE ARG ALA GLY ILE ILE LYS SEQRES 14 B 365 VAL ALA THR THR GLY LYS ALA THR PRO PHE GLN GLU LEU SEQRES 15 B 365 VAL LEU LYS ALA ALA ALA ARG ALA SER LEU ALA THR GLY SEQRES 16 B 365 VAL PRO VAL THR THR HIS THR ALA ALA SER GLN ARG ASP SEQRES 17 B 365 GLY GLU GLN GLN ALA ALA ILE PHE GLU SER GLU GLY LEU SEQRES 18 B 365 SER PRO SER ARG VAL CYS ILE GLY HIS SER ASP ASP THR SEQRES 19 B 365 ASP ASP LEU SER TYR LEU THR ALA LEU ALA ALA ARG GLY SEQRES 20 B 365 TYR LEU ILE GLY LEU ASP HIS ILE PRO HIS SER ALA ILE SEQRES 21 B 365 GLY LEU GLU ASP ASN ALA SER ALA SER ALA LEU LEU GLY SEQRES 22 B 365 ILE ARG SER TRP GLN THR ARG ALA LEU LEU ILE LYS ALA SEQRES 23 B 365 LEU ILE ASP GLN GLY TYR MET LYS GLN ILE LEU VAL SER SEQRES 24 B 365 ASN ASP TRP LEU PHE GLY PHE SER SER TYR VAL THR ASN SEQRES 25 B 365 ILE MET ASP VAL MET ASP ARG VAL ASN PRO ASP GLY MET SEQRES 26 B 365 ALA PHE ILE PRO LEU ARG VAL ILE PRO PHE LEU ARG GLU SEQRES 27 B 365 LYS GLY VAL PRO GLN GLU THR LEU ALA GLY ILE THR VAL SEQRES 28 B 365 THR ASN PRO ALA ARG PHE LEU SER PRO THR LEU ARG ALA SEQRES 29 B 365 SER
HET CD A 801 1 HET CD A 802 1 HET CD B 803 1 HET CD B 804 1 HET EBP A 900 16 HET EBP B 901 16 HET FMT A 901 3 HET FMT B 902 3
HETNAM CD CADMIUM ION HETNAM EBP DIETHYL 4-METHYLBENZYLPHOSPHONATE HETNAM FMT FORMIC ACID
FORMUL 3 CD 4(CD 2+) FORMUL 7 EBP 2(C12 H19 O3 P) FORMUL 9 FMT 2(C H2 O2) FORMUL 11 HOH *420(H2 O)
HELIX 1 1 ILE A 46 ALA A 49 1 4 HELIX 2 2 PHE A 65 ALA A 68 1 4 HELIX 3 3 PRO A 70 PHE A 73 5 4 HELIX 4 4 ARG A 76 ALA A 92 1 17 HELIX 5 5 PHE A 104 ILE A 106 5 3 HELIX 6 6 VAL A 110 ALA A 120 1 11 HELIX 7 7 LEU A 136 ARG A 139 1 4 HELIX 8 8 VAL A 143 GLN A 155 1 13 HELIX 9 9 PRO A 178 THR A 194 1 17 HELIX 10 10 ALA A 204 GLN A 206 5 3 HELIX 11 11 ASP A 208 GLU A 219 1 12 HELIX 12 12 PRO A 223 ARG A 225 5 3 HELIX 13 13 SER A 231 ASP A 233 5 3 HELIX 14 14 LEU A 237 ARG A 246 1 10 HELIX 15 15 ALA A 266 LEU A 272 1 7 HELIX 16 16 TRP A 277 ASP A 289 1 13 HELIX 17 17 MET A 293 GLN A 295 5 3 HELIX 18 18 ILE A 313 VAL A 320 1 8 HELIX 19 19 GLY A 324 LEU A 330 5 7 HELIX 20 20 VAL A 332 GLU A 338 1 7 HELIX 21 21 GLN A 343 THR A 350 1 8 HELIX 22 22 THR A 352 LEU A 358 1 7 HELIX 23 23 ILE B 46 ALA B 49 1 4 HELIX 24 24 PHE B 65 ALA B 68 1 4 HELIX 25 25 PRO B 70 PHE B 73 5 4 HELIX 26 26 ARG B 76 ALA B 92 1 17 HELIX 27 27 PHE B 104 ILE B 106 5 3 HELIX 28 28 VAL B 110 ALA B 120 1 11 HELIX 29 29 LEU B 136 ARG B 139 1 4 HELIX 30 30 VAL B 143 GLN B 155 1 13 HELIX 31 31 PRO B 178 THR B 194 1 17 HELIX 32 32 ALA B 204 GLN B 206 5 3 HELIX 33 33 ASP B 208 GLU B 219 1 12 HELIX 34 34 PRO B 223 ARG B 225 5 3 HELIX 35 35 SER B 231 ASP B 233 5 3 HELIX 36 36 LEU B 237 ARG B 246 1 10 HELIX 37 37 ALA B 266 LEU B 272 1 7 HELIX 38 38 TRP B 277 ASP B 289 1 13 HELIX 39 39 MET B 293 GLN B 295 5 3 HELIX 40 40 ILE B 313 VAL B 320 1 8 HELIX 41 41 GLY B 324 LEU B 330 5 7 HELIX 42 42 VAL B 332 GLU B 338 1 7 HELIX 43 43 GLN B 343 THR B 350 1 8 HELIX 44 44 THR B 352 LEU B 358 1 7
SHEET 1 A 2 ARG A 36 THR A 39 0 SHEET 2 A 2 GLY A 42 THR A 45 -1 N ILE A 44 O ILE A 37 SHEET 1 B 2 THR A 97 VAL A 99 0 SHEET 2 B 2 HIS A 123 VAL A 125 1 N HIS A 123 O ILE A 98 SHEET 1 C 4 ALA A 127 GLY A 129 0 SHEET 2 C 4 ILE A 167 ALA A 171 1 N ILE A 167 O THR A 128 SHEET 3 C 4 PRO A 197 HIS A 201 1 N PRO A 197 O ILE A 168 SHEET 4 C 4 VAL A 226 ILE A 228 1 N CYS A 227 O VAL A 198 SHEET 1 D 2 ILE A 250 LEU A 252 0 SHEET 2 D 2 ILE A 296 VAL A 298 1 N LEU A 297 O ILE A 250 SHEET 1 E 2 ARG B 36 THR B 39 0 SHEET 2 E 2 GLY B 42 THR B 45 -1 N ILE B 44 O ILE B 37 SHEET 1 F 3 HIS B 123 VAL B 125 0 SHEET 2 F 3 VAL B 95 VAL B 99 1 N ILE B 98 O HIS B 123 SHEET 3 F 3 PHE B 51 LEU B 53 1 N PHE B 51 O ARG B 96 SHEET 1 G 4 ALA B 127 GLY B 129 0 SHEET 2 G 4 ILE B 167 ALA B 171 1 N ILE B 167 O THR B 128 SHEET 3 G 4 VAL B 198 HIS B 201 1 N THR B 199 O ILE B 168 SHEET 4 G 4 VAL B 226 ILE B 228 1 N CYS B 227 O VAL B 198 SHEET 1 H 2 ILE B 250 LEU B 252 0 SHEET 2 H 2 ILE B 296 VAL B 298 1 N LEU B 297 O ILE B 250
LINK C FMT A 901 NZ LYS A 169 1555 1555 1.50 LINK C FMT B 902 NZ LYS B 169 1555 1555 1.48 LINK CD CD A 801 OD1 ASP A 301 1555 1555 2.48 LINK CD CD A 801 O2 FMT A 901 1555 1555 2.41 LINK CD CD A 801 O HOH A 912 1555 1555 2.62 LINK CD CD A 801 NE2 HIS A 55 1555 1555 2.04 LINK CD CD A 801 NE2 HIS A 57 1555 1555 2.15 LINK CD CD A 802 O HOH A 912 1555 1555 2.68 LINK CD CD A 802 NE2 HIS A 230 1555 1555 2.09 LINK CD CD A 802 O1 FMT A 901 1555 1555 2.30 LINK CD CD A 802 ND1 HIS A 201 1555 1555 2.44 LINK CD CD A 802 O HOH A 985 1555 1555 2.66 LINK CD CD A 802 O HOH A 905 1555 1555 2.61 LINK CD CD B 803 O1 FMT B 902 1555 1555 2.35 LINK CD CD B 803 O HOH B1004 1555 1555 2.75 LINK CD CD B 803 OD1 ASP B 301 1555 1555 2.44 LINK CD CD B 803 NE2 HIS B 57 1555 1555 2.24 LINK CD CD B 803 NE2 HIS B 55 1555 1555 1.96 LINK CD CD B 804 ND1 HIS B 201 1555 1555 2.23 LINK CD CD B 804 NE2 HIS B 230 1555 1555 2.14 LINK CD CD B 804 O HOH B1002 1555 1555 2.68 LINK CD CD B 804 O HOH B1003 1555 1555 2.70 LINK CD CD B 804 O2 FMT B 902 1555 1555 2.21 LINK CD CD B 804 O HOH B1004 1555 1555 2.73
SITE 1 AC1 5 HIS A 55 HIS A 57 ASP A 301 FMT A 901 SITE 2 AC1 5 HOH A 912 SITE 1 AC2 6 HIS A 201 HIS A 230 FMT A 901 HOH A 905 SITE 2 AC2 6 HOH A 912 HOH A 985 SITE 1 AC3 5 HIS B 55 HIS B 57 ASP B 301 FMT B 902 SITE 2 AC3 5 HOH B1004 SITE 1 AC4 6 HIS B 201 HIS B 230 FMT B 902 HOH B1002 SITE 2 AC4 6 HOH B1003 HOH B1004 SITE 1 AC5 6 PHE A 51 GLU A 71 LEU B 151 ARG B 152 SITE 2 AC5 6 GLN B 155 TYR B 156 SITE 1 AC6 7 LEU A 151 ARG A 152 GLN A 155 TYR A 156 SITE 2 AC6 7 PHE B 51 HOH B1038 HOH B1105 SITE 1 AC7 7 HIS A 55 HIS A 57 LYS A 169 HIS A 201 SITE 2 AC7 7 HIS A 230 CD A 801 CD A 802 SITE 1 AC8 7 HIS B 55 HIS B 57 LYS B 169 HIS B 201 SITE 2 AC8 7 HIS B 230 CD B 803 CD B 804
CRYST1 129.500 91.400 69.400 90.00 91.90 90.00 C 1 2 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007722 0.000000 0.000256 0.00000
SCALE2 0.000000 0.010941 0.000000 0.00000
SCALE3 0.000000 0.000000 0.014417 0.00000