10 20 30 40 50 60 70 80 1PKS - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PHOSPHOTRANSFERASE 07-MAR-94 1PKS
TITLE STRUCTURE OF THE PI3K SH3 DOMAIN AND ANALYSIS OF THE SH3 TITLE 2 FAMILY
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHATIDYLINOSITOL 3-KINASE P85-ALPHA SUBUNIT COMPND 3 SH3 DOMAIN; COMPND 4 CHAIN: A; COMPND 5 EC: 2.7.1.137; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606
KEYWDS PHOSPHOTRANSFERASE
EXPDTA SOLUTION NMR
AUTHOR S.KOYAMA,H.YU,D.C.DALGARNO,T.B.SHIN,L.D.ZYDOWSKY, AUTHOR 2 S.L.SCHREIBER
REVDAT 2 24-FEB-09 1PKS 1 VERSN REVDAT 1 31-MAY-94 1PKS 0
JRNL AUTH S.KOYAMA,H.YU,D.C.DALGARNO,T.B.SHIN,L.D.ZYDOWSKY, JRNL AUTH 2 S.L.SCHREIBER JRNL TITL STRUCTURE OF THE PI3K SH3 DOMAIN AND ANALYSIS OF JRNL TITL 2 THE SH3 FAMILY. JRNL REF CELL(CAMBRIDGE,MASS.) V. 72 945 1993 JRNL REFN ISSN 0092-8674 JRNL PMID 7681364 JRNL DOI 10.1016/0092-8674(93)90582-B
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.KOYAMA,H.YU,D.C.DALGARNO,T.B.SHIN,L.D.ZYDOWSKY, REMARK 1 AUTH 2 S.L.SCHREIBER REMARK 1 TITL 1H AND 15N ASSIGNMENTS AND SECONDARY STRUCTURE OF REMARK 1 TITL 2 THE PI3K SH3 DOMAIN REMARK 1 REF FEBS LETT. V. 324 93 1993 REMARK 1 REFN ISSN 0014-5793
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1PKS COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 25 CG HIS A 25 ND1 -0.101 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 55 CG - CD1 - NE1 ANGL. DEV. = -6.5 DEGREES REMARK 500 TRP A 55 CD1 - NE1 - CE2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP A 55 NE1 - CE2 - CZ2 ANGL. DEV. = 8.5 DEGREES REMARK 500 TRP A 55 NE1 - CE2 - CD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 16 88.53 -54.18 REMARK 500 GLU A 17 -76.35 -89.99 REMARK 500 ASN A 33 176.80 -51.76 REMARK 500 PHE A 42 -177.44 -49.78 REMARK 500 ASP A 44 85.78 -68.46 REMARK 500 ALA A 48 41.94 -95.48 REMARK 500 ARG A 49 66.25 -156.24 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PKT RELATED DB: PDB
DBREF 1PKS A 1 79 UNP P27986 P85A_HUMAN 1 79
SEQRES 1 A 79 MET SER ALA GLU GLY TYR GLN TYR ARG ALA LEU TYR ASP SEQRES 2 A 79 TYR LYS LYS GLU ARG GLU GLU ASP ILE ASP LEU HIS LEU SEQRES 3 A 79 GLY ASP ILE LEU THR VAL ASN LYS GLY SER LEU VAL ALA SEQRES 4 A 79 LEU GLY PHE SER ASP GLY GLN GLU ALA ARG PRO GLU GLU SEQRES 5 A 79 ILE GLY TRP LEU ASN GLY TYR ASN GLU THR THR GLY GLU SEQRES 6 A 79 ARG GLY ASP PHE PRO GLY THR TYR VAL GLU TYR ILE GLY SEQRES 7 A 79 ARG
HELIX 1 H1 LYS A 34 ALA A 39 1RIGHT-HANDED ALPHA HELIX 6 HELIX 2 H2 GLN A 46 ARG A 49 1RIGHT-HANDED 3=10= HELIX 4 HELIX 3 H3 PRO A 50 ILE A 53 1RIGHT-HANDED 3=10= HELIX 4 HELIX 4 H4 GLY A 71 VAL A 74 1RIGHT-HANDED 3=10= HELIX 4
SHEET 1 S1 5 GLU A 65 PRO A 70 0 SHEET 2 S1 5 TRP A 55 ASN A 60 -1 N GLY A 58 O GLY A 67 SHEET 3 S1 5 ASP A 28 VAL A 32 -1 N THR A 31 O TYR A 59 SHEET 4 S1 5 TYR A 6 LEU A 11 -1 N TYR A 8 O LEU A 30 SHEET 5 S1 5 VAL A 74 GLY A 78 -1 N GLU A 75 O ARG A 9
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000