1PJD - Header Asymmetric Unit

HEADER MEMBRANE PROTEIN 02-JUN-03 1PJD

TITLE STRUCTURE AND TOPOLOGY OF A PEPTIDE SEGMENT OF THE 6TH TITLE 2 TRANSMEMBRANE DOMAIN OF THE SACCHAROMYCES CEREVISIAE ALPHA- TITLE 3 FACTOR RECEPTOR IN PHOSPHOLIPID BILAYERS

COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHEROMONE ALPHA FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES

SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN A PORTION SOURCE 4 OF THE 6TH TRANSMEMBRANE DOMAIN OF THE ALPHA FACTOR SOURCE 5 RECEPTOR OF SACCHAROMYCES CEREVISIAE. 15N SELECTIVELY SOURCE 6 LABELED FMOC-LEU, -ALA, -PHE, -VAL, -ILE WERE USED.

KEYWDS ALPHA HELIX, MEMBRANE PROTEIN

EXPDTA SOLID-STATE NMR

AUTHOR K.G.VALENTINE,S.-F.LIU,F.M.MARASSI,G.VEGLIA,A.A.NEVZOROV, AUTHOR 2 S.J.OPELLA,F.-X.DING,S.-H.WANG,B.ARSHAVA,J.M.BECKER,F.NAIDER

REVDAT 2 24-FEB-09 1PJD 1 VERSN REVDAT 1 16-SEP-03 1PJD 0

JRNL AUTH K.G.VALENTINE,S.-F.LIU,F.M.MARASSI,G.VEGLIA, JRNL AUTH 2 S.J.OPELLA,F.-X.DING,S.-H.WANG,B.ARSHAVA, JRNL AUTH 3 J.M.BECKER,F.NAIDER JRNL TITL STRUCTURE AND TOPOLOGY OF A PEPTIDE SEGMENT OF THE JRNL TITL 2 6TH TRANSMEMBRANE DOMAIN OF THE SACCHAROMYCES JRNL TITL 3 CEREVISIAE ALPHA-FACTOR RECEPTOR IN PHOSPHOLIPID JRNL TITL 4 BILAYERS JRNL REF BIOPOLYMERS V. 59 243 2001 JRNL REFN ISSN 0006-3525 JRNL PMID 11473349 JRNL DOI 10.1002/1097-0282(20011005)59:4<243::AID-BIP1021>3. JRNL DOI 2 0.CO;2-H

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SRUCTURAL FITTING 1.0 REMARK 3 AUTHORS : NEVZOROV, OPELLA REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THIS STRUCTURE WAS CALCULATED BY REMARK 3 USING A STRUCTURAL FITTING ALGORITHM THAT FINDS TORSION ANGLES REMARK 3 BETWEEN CONSECUTIVE RESIDUES BASED ON THEIR NMR FREQUENCIES.

REMARK 4 REMARK 4 1PJD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-03. REMARK 100 THE RCSB ID CODE IS RCSB019358.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 278 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : ALIGNED SAMPLE ON GLASS PLATES REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : PISEMA REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : MAGNEX REMARK 210 SPECTROMETER MANUFACTURER : HOMEBUILT REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 97, SRUCTURAL FITTING REMARK 210 1.0 REMARK 210 METHOD USED : DIRECT STRUCTURAL FITTING OF REMARK 210 2D SOLID-STATE NMR SPECTRA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: PISEMA: POLARIZATION INVERSION SPIN EXCHANGE AT THE REMARK 210 MAGIC ANGLE

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLID- REMARK 215 STATE NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 215 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 215 ON THESE RECORDS ARE MEANINGLESS.

REMARK 217 REMARK 217 SOLID STATE NMR STUDY REMARK 217 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLID REMARK 217 STATE NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 217 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 217 THESE RECORDS ARE MEANINGLESS.

REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLN A 2 REMARK 465 LYS A 18

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 6 -31.46 -35.12 REMARK 500 ILE A 9 -31.11 -35.21 REMARK 500 ALA A 14 -18.93 -45.67 REMARK 500 REMARK 500 REMARK: NULL

DBREF 1PJD A 1 18 UNP P06842 STE2_YEAST 252 269

SEQADV 1PJD ALA A 1 UNP P06842 CYS 252 ENGINEERED

SEQRES 1 A 18 ALA GLN SER LEU LEU VAL PRO SER ILE ILE PHE ILE LEU SEQRES 2 A 18 ALA TYR SER LEU LYS

HELIX 1 1 LEU A 4 ALA A 14 1 11 HELIX 2 2 TYR A 15 LEU A 17 5 3

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000