10 20 30 40 50 60 70 80 1P98 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER REPLICATION 09-MAY-03 1P98
TITLE HIGH-RESOLUTION NMR STRUCTURE OF THE UBL-DOMAIN OF HHR23A
COMPND MOL_ID: 1; COMPND 2 MOLECULE: UV EXCISION REPAIR PROTEIN RAD23 HOMOLOG A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UBIQUITIN-LIKE DOMAIN; COMPND 5 SYNONYM: HHR23A; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAD23A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS UBIQUITIN-LIKE DOMAIN, REPLICATION
EXPDTA SOLUTION NMR
NUMMDL 11
AUTHOR T.D.MUELLER,J.FEIGON
REVDAT 2 24-FEB-09 1P98 1 VERSN REVDAT 1 07-OCT-03 1P98 0
JRNL AUTH T.D.MUELLER,J.FEIGON JRNL TITL STRUCTURAL DETERMINANTS FOR THE BINDING OF JRNL TITL 2 UBIQUITIN-LIKE DOMAINS TO THE PROTEASOME. JRNL REF EMBO J. V. 22 4634 2003 JRNL REFN ISSN 0261-4189 JRNL PMID 12970176 JRNL DOI 10.1093/EMBOJ/CDG467
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.D.MUELLER,J.FEIGON REMARK 1 TITL SOLUTION STRUCTURES OF UBA DOMAINS REVEAL A REMARK 1 TITL 2 CONSERVED HYDROPHOBIC SURFACE FOR PROTEIN-PROTEIN REMARK 1 TITL 3 INTERACTIONS REMARK 1 REF J.MOL.BIOL. V. 319 1243 2002 REMARK 1 REFN ISSN 0022-2836 REMARK 1 DOI 10.1016/S0022-2836(02)00302-9
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1P98 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAY-03. REMARK 100 THE RCSB ID CODE IS RCSB019166.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 150MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2MM UBIQUITIN-LIKE DOMAIN OF REMARK 210 HHR23A U-15N,13C; 2MM REMARK 210 UBIQUITIN-LIKE DOMAIN OF REMARK 210 HHR23A, UNLABELED REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 3D_13C-SEPARATED_ REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AURELIA 2.8.9, XWINNMR 2.5, X REMARK 210 -PLOR 3.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 120 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 11 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 9 -127.57 -62.08 REMARK 500 1 LEU A 10 36.25 -91.36 REMARK 500 1 GLN A 11 -22.19 91.14 REMARK 500 1 ARG A 18 -76.09 -24.47 REMARK 500 1 MET A 19 -157.00 38.28 REMARK 500 1 VAL A 25 -32.96 78.50 REMARK 500 1 LYS A 36 -65.35 -100.54 REMARK 500 1 VAL A 43 -32.74 -38.74 REMARK 500 2 ALA A 2 -160.93 80.72 REMARK 500 2 VAL A 3 -159.42 -131.40 REMARK 500 2 LEU A 10 -29.72 86.31 REMARK 500 2 GLN A 12 -18.28 124.10 REMARK 500 2 PHE A 15 -163.34 -126.76 REMARK 500 2 ARG A 18 -82.34 -62.06 REMARK 500 2 MET A 19 -165.72 44.96 REMARK 500 2 VAL A 25 -27.04 77.65 REMARK 500 2 LYS A 36 -67.09 -97.45 REMARK 500 2 ARG A 65 56.50 34.70 REMARK 500 2 ASN A 70 -155.29 -110.62 REMARK 500 2 PHE A 71 139.17 -171.51 REMARK 500 3 VAL A 3 -161.67 -72.82 REMARK 500 3 LEU A 10 -30.67 76.85 REMARK 500 3 GLN A 11 -51.66 161.49 REMARK 500 3 ARG A 18 69.50 -101.18 REMARK 500 3 VAL A 25 -25.92 76.06 REMARK 500 3 LYS A 36 -64.79 -96.89 REMARK 500 3 ALA A 44 -74.35 -51.70 REMARK 500 3 ARG A 65 41.92 37.32 REMARK 500 4 ALA A 2 174.16 58.84 REMARK 500 4 THR A 9 -127.44 -62.18 REMARK 500 4 LEU A 10 35.73 -90.17 REMARK 500 4 GLN A 11 -18.77 88.53 REMARK 500 4 PHE A 15 -158.39 -158.43 REMARK 500 4 ARG A 18 -78.82 -28.30 REMARK 500 4 MET A 19 -160.56 41.16 REMARK 500 4 VAL A 25 -29.59 77.30 REMARK 500 4 LYS A 36 -65.08 -96.97 REMARK 500 4 VAL A 43 -33.27 -38.18 REMARK 500 4 THR A 77 128.17 70.02 REMARK 500 5 VAL A 3 -159.79 -82.05 REMARK 500 5 LEU A 10 -40.52 78.25 REMARK 500 5 GLN A 11 -47.90 168.49 REMARK 500 5 ARG A 18 69.06 -100.12 REMARK 500 5 VAL A 25 -27.74 76.96 REMARK 500 5 LYS A 36 -65.73 -96.89 REMARK 500 5 ARG A 65 46.23 38.10 REMARK 500 5 ASN A 70 -153.88 -108.21 REMARK 500 5 PHE A 71 141.35 -174.71 REMARK 500 6 ALA A 2 174.64 58.71 REMARK 500 6 LEU A 10 -32.35 86.88 REMARK 500 6 GLN A 12 -43.14 159.37 REMARK 500 6 ARG A 18 70.53 -105.42 REMARK 500 6 VAL A 25 -25.45 75.46 REMARK 500 6 LYS A 36 -65.20 -98.57 REMARK 500 6 VAL A 43 -30.91 -39.53 REMARK 500 6 GLN A 46 91.07 -65.86 REMARK 500 6 ARG A 65 41.99 36.18 REMARK 500 7 THR A 9 -127.26 -62.09 REMARK 500 7 LEU A 10 36.22 -90.69 REMARK 500 7 GLN A 11 -22.48 89.73 REMARK 500 7 ARG A 18 68.76 -104.75 REMARK 500 7 VAL A 25 -30.59 78.18 REMARK 500 7 LYS A 36 -66.04 -97.15 REMARK 500 7 VAL A 43 -31.91 -38.65 REMARK 500 8 VAL A 3 -165.10 -75.34 REMARK 500 8 LEU A 10 -34.96 85.24 REMARK 500 8 GLN A 12 -37.22 157.51 REMARK 500 8 GLN A 13 95.12 -62.99 REMARK 500 8 ARG A 18 72.64 -105.07 REMARK 500 8 VAL A 25 -28.01 77.46 REMARK 500 8 LYS A 36 -66.32 -100.23 REMARK 500 8 GLN A 46 93.71 -67.63 REMARK 500 8 ARG A 65 49.02 36.88 REMARK 500 9 LEU A 10 -36.31 82.62 REMARK 500 9 GLN A 11 -46.82 162.29 REMARK 500 9 ARG A 18 67.94 -102.45 REMARK 500 9 VAL A 25 -28.39 77.42 REMARK 500 9 LYS A 36 -65.74 -97.24 REMARK 500 9 ARG A 65 49.11 39.96 REMARK 500 10 ALA A 2 -177.11 57.09 REMARK 500 10 LEU A 10 -31.40 81.69 REMARK 500 10 GLN A 11 -49.25 162.04 REMARK 500 10 ARG A 18 65.70 -103.61 REMARK 500 10 VAL A 25 -30.98 78.11 REMARK 500 10 LYS A 36 -65.05 -97.63 REMARK 500 10 ARG A 65 49.11 32.71 REMARK 500 10 ASN A 70 -154.23 -104.21 REMARK 500 10 PHE A 71 140.37 -175.97 REMARK 500 11 ALA A 2 174.24 62.07 REMARK 500 11 THR A 9 -125.76 -61.05 REMARK 500 11 LEU A 10 38.89 -91.97 REMARK 500 11 GLN A 11 -12.64 86.67 REMARK 500 11 ARG A 18 66.52 -106.31 REMARK 500 11 VAL A 25 -28.62 77.60 REMARK 500 11 LYS A 36 -65.29 -98.44 REMARK 500 11 ARG A 65 39.76 38.92 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DV0 RELATED DB: PDB REMARK 900 C-TERMINAL UBA DOMAIN OF HHR23A REMARK 900 RELATED ID: 1IFY RELATED DB: PDB REMARK 900 N-TERMINAL UBA DOMAIN OF HHR23A REMARK 900 RELATED ID: 1F4I RELATED DB: PDB REMARK 900 MUTANT OF C-TERMINAL UBA DOMAIN OF HHR23A REMARK 900 RELATED ID: 1P9C RELATED DB: PDB REMARK 900 STRUCTURE OF THE C-TERMINAL UBIQUITIN-INTERACTING MOTIF OF REMARK 900 THE PROEASOME SUBUNIT S5A IN ITS UNBOUND CONFORMATION REMARK 900 RELATED ID: 1P9D RELATED DB: PDB REMARK 900 HIGH-RESOLUTION STRUCTURE OF THE COMPLEX OF HHR23A REMARK 900 UBIQUITIN-LIKE DOMAIN AND THE C-TERMINAL UBIQUITIN- REMARK 900 INTERACTING MOTIF OF PROTEASOME SUBUNIT S5A
DBREF 1P98 A 1 78 UNP P54725 RD23A_HUMAN 1 78
SEQRES 1 A 78 MET ALA VAL THR ILE THR LEU LYS THR LEU GLN GLN GLN SEQRES 2 A 78 THR PHE LYS ILE ARG MET GLU PRO ASP GLU THR VAL LYS SEQRES 3 A 78 VAL LEU LYS GLU LYS ILE GLU ALA GLU LYS GLY ARG ASP SEQRES 4 A 78 ALA PHE PRO VAL ALA GLY GLN LYS LEU ILE TYR ALA GLY SEQRES 5 A 78 LYS ILE LEU SER ASP ASP VAL PRO ILE ARG ASP TYR ARG SEQRES 6 A 78 ILE ASP GLU LYS ASN PHE VAL VAL VAL MET VAL THR LYS
HELIX 1 1 VAL A 25 LYS A 36 1 12 HELIX 2 2 ILE A 61 ARG A 65 5 5
SHEET 1 A 5 THR A 14 ILE A 17 0 SHEET 2 A 5 ILE A 5 LYS A 8 -1 N LEU A 7 O PHE A 15 SHEET 3 A 5 VAL A 72 MET A 75 1 O VAL A 72 N LYS A 8 SHEET 4 A 5 LYS A 47 TYR A 50 -1 N ILE A 49 O VAL A 73 SHEET 5 A 5 LYS A 53 LEU A 55 -1 O LEU A 55 N LEU A 48
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000