10 20 30 40 50 60 70 80 1P8Z - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL PROTEIN/CONTRACTILE PROTEIN 08-MAY-03 1P8Z
TITLE COMPLEX BETWEEN RABBIT MUSCLE ALPHA-ACTIN: HUMAN GELSOLIN TITLE 2 RESIDUES VAL26-GLU156
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GELSOLIN PRECURSOR, PLASMA; COMPND 3 CHAIN: G; COMPND 4 SYNONYM: ACTIN-DEPOLYMERIZING FACTOR, ADF, BREVIN, AGEL; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ACTIN, ALPHA SKELETAL MUSCLE; COMPND 8 CHAIN: A; COMPND 9 SYNONYM: ALPHA-ACTIN 1
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 9 ORGANISM_COMMON: RABBIT; SOURCE 10 ORGANISM_TAXID: 9986
KEYWDS LINKER BETWEEN GELSOLIN DOMAIN 1 AND DOMAIN 2, STRUCTURAL KEYWDS 2 PROTEIN/CONTRACTILE PROTEIN COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR E.IROBI,L.D.BURTNICK,R.C.ROBINSON
REVDAT 3 24-FEB-09 1P8Z 1 VERSN REVDAT 2 21-OCT-03 1P8Z 1 CRYST1 REVDAT 1 14-OCT-03 1P8Z 0
JRNL AUTH E.IROBI,L.D.BURTNICK,D.UROSEV,K.NARAYAN, JRNL AUTH 2 R.C.ROBINSON JRNL TITL FROM THE FIRST TO THE SECOND DOMAIN OF GELSOLIN: A JRNL TITL 2 COMMON PATH ON THE SURFACE OF ACTIN? JRNL REF FEBS LETT. V. 552 86 2003 JRNL REFN ISSN 0014-5793 JRNL PMID 14527665 JRNL DOI 10.1016/S0014-5793(03)00934-7
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 21012 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1050 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.69 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 106 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3810 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 184 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.19900 REMARK 3 B22 (A**2) : 3.19900 REMARK 3 B33 (A**2) : -6.39800 REMARK 3 B12 (A**2) : -1.54800 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.58 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.541 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.646 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.351 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.601 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ATP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1P8Z COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAY-03. REMARK 100 THE RCSB ID CODE IS RCSB019157.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0052 REMARK 200 MONOCHROMATOR : SI(311) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21012 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, 10 MM CADMIUM REMARK 280 CHLORIDE, 12.5% (V/V) PEG 400, PH 5.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -Y,-X,-Z+2/3 REMARK 290 5555 -X+Y,Y,-Z+1/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.25667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.51333 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 62.51333 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.25667 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -103.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 57.11000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 98.91742 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -31.25667
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET G 25 REMARK 465 VAL G 157 REMARK 465 VAL G 158 REMARK 465 VAL G 159 REMARK 465 GLN G 160 REMARK 465 MET A -1 REMARK 465 CYS A 0 REMARK 465 ASP A 1 REMARK 465 GLU A 2 REMARK 465 ASP A 3 REMARK 465 GLU A 4 REMARK 465 THR A 5 REMARK 465 HIS A 40 REMARK 465 GLN A 41 REMARK 465 GLY A 42 REMARK 465 VAL A 43 REMARK 465 MET A 44 REMARK 465 VAL A 45 REMARK 465 GLY A 46 REMARK 465 MET A 47 REMARK 465 GLY A 48 REMARK 465 GLN A 49 REMARK 465 LYS A 50 REMARK 465 HIS A 371 REMARK 465 ARG A 372 REMARK 465 LYS A 373 REMARK 465 CYS A 374 REMARK 465 PHE A 375
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 322 CA - N - CD ANGL. DEV. = -17.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG G 77 -56.76 -2.05 REMARK 500 ASN G 78 38.39 -68.34 REMARK 500 ASN G 80 60.41 -116.29 REMARK 500 LEU G 112 30.53 -77.55 REMARK 500 ASN G 113 15.45 59.29 REMARK 500 SER G 136 36.26 -90.68 REMARK 500 PRO A 38 -169.57 -70.58 REMARK 500 ASP A 179 27.99 -68.41 REMARK 500 ALA A 181 -166.18 -164.39 REMARK 500 TYR A 198 -178.73 -51.76 REMARK 500 SER A 199 118.44 -164.51 REMARK 500 THR A 202 172.26 -56.49 REMARK 500 SER A 232 -72.80 -98.71 REMARK 500 GLN A 246 154.29 -47.18 REMARK 500 GLU A 270 4.06 -61.19 REMARK 500 ASN A 296 54.06 -146.20 REMARK 500 SER A 323 -17.67 -48.74 REMARK 500 ARG A 335 -10.48 -48.52 REMARK 500 SER A 368 3.61 -61.31 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH G1011 DISTANCE = 5.39 ANGSTROMS REMARK 525 HOH A1016 DISTANCE = 5.08 ANGSTROMS REMARK 525 HOH G1020 DISTANCE = 5.27 ANGSTROMS REMARK 525 HOH A1024 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH A1028 DISTANCE = 5.05 ANGSTROMS REMARK 525 HOH G1034 DISTANCE = 6.89 ANGSTROMS REMARK 525 HOH A1038 DISTANCE = 5.33 ANGSTROMS REMARK 525 HOH G1051 DISTANCE = 6.77 ANGSTROMS REMARK 525 HOH A1091 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A1115 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A1135 DISTANCE = 5.57 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1001 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 380 O3G REMARK 620 2 ATP A 380 O2B 85.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1004 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 222 OD1 REMARK 620 2 ASP A 222 OD2 49.6 REMARK 620 3 GLU A 276 OE1 123.8 168.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD G1002 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP G 109 OD2 REMARK 620 2 GLU A 167 OE1 84.5 REMARK 620 3 ASP G 109 OD1 45.3 128.5 REMARK 620 4 GLY G 114 O 106.9 153.7 70.2 REMARK 620 5 ALA G 116 O 93.3 104.7 73.4 98.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA G1003 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU G 97 OE1 REMARK 620 2 GLU G 97 OE2 48.1 REMARK 620 3 ASP G 66 OD2 100.8 89.8 REMARK 620 4 VAL G 145 O 150.3 103.8 86.2 REMARK 620 5 GLY G 65 O 73.9 115.8 74.5 135.3 REMARK 620 N 1 2 3 4
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1001 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD G 1002 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA G 1003 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1004 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 380
DBREF 1P8Z G 25 160 UNP P06396 GELS_HUMAN 52 187 DBREF 1P8Z A -1 375 UNP P68135 ACTS_RABIT 1 377
SEQRES 1 G 136 MET VAL VAL GLU HIS PRO GLU PHE LEU LYS ALA GLY LYS SEQRES 2 G 136 GLU PRO GLY LEU GLN ILE TRP ARG VAL GLU LYS PHE ASP SEQRES 3 G 136 LEU VAL PRO VAL PRO THR ASN LEU TYR GLY ASP PHE PHE SEQRES 4 G 136 THR GLY ASP ALA TYR VAL ILE LEU LYS THR VAL GLN LEU SEQRES 5 G 136 ARG ASN GLY ASN LEU GLN TYR ASP LEU HIS TYR TRP LEU SEQRES 6 G 136 GLY ASN GLU CYS SER GLN ASP GLU SER GLY ALA ALA ALA SEQRES 7 G 136 ILE PHE THR VAL GLN LEU ASP ASP TYR LEU ASN GLY ARG SEQRES 8 G 136 ALA VAL GLN HIS ARG GLU VAL GLN GLY PHE GLU SER ALA SEQRES 9 G 136 THR PHE LEU GLY TYR PHE LYS SER GLY LEU LYS TYR LYS SEQRES 10 G 136 LYS GLY GLY VAL ALA SER GLY PHE LYS HIS VAL VAL PRO SEQRES 11 G 136 ASN GLU VAL VAL VAL GLN SEQRES 1 A 377 MET CYS ASP GLU ASP GLU THR THR ALA LEU VAL CYS ASP SEQRES 2 A 377 ASN GLY SER GLY LEU VAL LYS ALA GLY PHE ALA GLY ASP SEQRES 3 A 377 ASP ALA PRO ARG ALA VAL PHE PRO SER ILE VAL GLY ARG SEQRES 4 A 377 PRO ARG HIS GLN GLY VAL MET VAL GLY MET GLY GLN LYS SEQRES 5 A 377 ASP SER TYR VAL GLY ASP GLU ALA GLN SER LYS ARG GLY SEQRES 6 A 377 ILE LEU THR LEU LYS TYR PRO ILE GLU HIS GLY ILE ILE SEQRES 7 A 377 THR ASN TRP ASP ASP MET GLU LYS ILE TRP HIS HIS THR SEQRES 8 A 377 PHE TYR ASN GLU LEU ARG VAL ALA PRO GLU GLU HIS PRO SEQRES 9 A 377 THR LEU LEU THR GLU ALA PRO LEU ASN PRO LYS ALA ASN SEQRES 10 A 377 ARG GLU LYS MET THR GLN ILE MET PHE GLU THR PHE ASN SEQRES 11 A 377 VAL PRO ALA MET TYR VAL ALA ILE GLN ALA VAL LEU SER SEQRES 12 A 377 LEU TYR ALA SER GLY ARG THR THR GLY ILE VAL LEU ASP SEQRES 13 A 377 SER GLY ASP GLY VAL THR HIS ASN VAL PRO ILE TYR GLU SEQRES 14 A 377 GLY TYR ALA LEU PRO HIS ALA ILE MET ARG LEU ASP LEU SEQRES 15 A 377 ALA GLY ARG ASP LEU THR ASP TYR LEU MET LYS ILE LEU SEQRES 16 A 377 THR GLU ARG GLY TYR SER PHE VAL THR THR ALA GLU ARG SEQRES 17 A 377 GLU ILE VAL ARG ASP ILE LYS GLU LYS LEU CYS TYR VAL SEQRES 18 A 377 ALA LEU ASP PHE GLU ASN GLU MET ALA THR ALA ALA SER SEQRES 19 A 377 SER SER SER LEU GLU LYS SER TYR GLU LEU PRO ASP GLY SEQRES 20 A 377 GLN VAL ILE THR ILE GLY ASN GLU ARG PHE ARG CYS PRO SEQRES 21 A 377 GLU THR LEU PHE GLN PRO SER PHE ILE GLY MET GLU SER SEQRES 22 A 377 ALA GLY ILE HIS GLU THR THR TYR ASN SER ILE MET LYS SEQRES 23 A 377 CYS ASP ILE ASP ILE ARG LYS ASP LEU TYR ALA ASN ASN SEQRES 24 A 377 VAL MET SER GLY GLY THR THR MET TYR PRO GLY ILE ALA SEQRES 25 A 377 ASP ARG MET GLN LYS GLU ILE THR ALA LEU ALA PRO SER SEQRES 26 A 377 THR MET LYS ILE LYS ILE ILE ALA PRO PRO GLU ARG LYS SEQRES 27 A 377 TYR SER VAL TRP ILE GLY GLY SER ILE LEU ALA SER LEU SEQRES 28 A 377 SER THR PHE GLN GLN MET TRP ILE THR LYS GLN GLU TYR SEQRES 29 A 377 ASP GLU ALA GLY PRO SER ILE VAL HIS ARG LYS CYS PHE
HET CD A1001 1 HET CD G1002 1 HET CA G1003 1 HET CD A1004 1 HET ATP A 380 31
HETNAM CD CADMIUM ION HETNAM CA CALCIUM ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE
FORMUL 3 CD 3(CD 2+) FORMUL 5 CA CA 2+ FORMUL 7 ATP C10 H16 N5 O13 P3 FORMUL 8 HOH *184(H2 O)
HELIX 1 1 HIS G 29 ALA G 35 1 7 HELIX 2 2 PRO G 55 TYR G 59 5 5 HELIX 3 3 SER G 94 LEU G 112 1 19 HELIX 4 4 SER G 127 TYR G 133 1 7 HELIX 5 5 GLY A 55 LYS A 61 1 7 HELIX 6 6 ARG A 62 LEU A 65 5 4 HELIX 7 7 ASN A 78 TYR A 91 1 14 HELIX 8 8 ALA A 97 HIS A 101 5 5 HELIX 9 9 PRO A 112 THR A 126 1 15 HELIX 10 10 GLN A 137 SER A 145 1 9 HELIX 11 11 ALA A 181 ARG A 196 1 16 HELIX 12 12 THR A 202 CYS A 217 1 16 HELIX 13 13 ASP A 222 SER A 233 1 12 HELIX 14 14 ASN A 252 GLN A 263 1 12 HELIX 15 15 PRO A 264 GLY A 268 5 5 HELIX 16 16 GLY A 273 LYS A 284 1 12 HELIX 17 17 CYS A 285 CYS A 285 5 1 HELIX 18 18 ASP A 286 ASP A 288 5 3 HELIX 19 19 ILE A 289 ALA A 295 1 7 HELIX 20 20 GLY A 301 MET A 305 5 5 HELIX 21 21 GLY A 308 ALA A 321 1 14 HELIX 22 22 GLU A 334 LYS A 336 5 3 HELIX 23 23 TYR A 337 ALA A 347 1 11 HELIX 24 24 SER A 348 SER A 350 5 3 HELIX 25 25 THR A 351 TRP A 356 1 6 HELIX 26 26 LYS A 359 GLY A 366 1 8 HELIX 27 27 PRO A 367 VAL A 370 5 4
SHEET 1 A 5 ASP G 50 PRO G 53 0 SHEET 2 A 5 GLY G 40 GLU G 47 -1 N ARG G 45 O VAL G 52 SHEET 3 A 5 ALA G 67 VAL G 74 -1 O THR G 73 N GLY G 40 SHEET 4 A 5 GLN G 82 LEU G 89 -1 O HIS G 86 N ILE G 70 SHEET 5 A 5 VAL G 117 VAL G 122 1 O GLU G 121 N TYR G 87 SHEET 1 B 2 ASP G 61 PHE G 63 0 SHEET 2 B 2 LYS G 139 LYS G 141 1 O LYS G 139 N PHE G 62 SHEET 1 C 6 ALA A 29 PRO A 32 0 SHEET 2 C 6 LEU A 16 PHE A 21 -1 N ALA A 19 O ALA A 29 SHEET 3 C 6 LEU A 8 ASN A 12 -1 N ASP A 11 O LYS A 18 SHEET 4 C 6 THR A 103 GLU A 107 1 O LEU A 104 N LEU A 8 SHEET 5 C 6 ALA A 131 ILE A 136 1 O ALA A 131 N THR A 103 SHEET 6 C 6 ILE A 357 THR A 358 -1 O ILE A 357 N MET A 132 SHEET 1 D 3 TYR A 53 VAL A 54 0 SHEET 2 D 3 VAL A 35 ARG A 37 -1 N GLY A 36 O TYR A 53 SHEET 3 D 3 THR A 66 LYS A 68 -1 O THR A 66 N ARG A 37 SHEET 1 E 2 ILE A 71 GLU A 72 0 SHEET 2 E 2 ILE A 75 ILE A 76 -1 O ILE A 75 N GLU A 72 SHEET 1 F 3 TYR A 169 ALA A 170 0 SHEET 2 F 3 THR A 160 TYR A 166 -1 N TYR A 166 O TYR A 169 SHEET 3 F 3 MET A 176 LEU A 178 -1 O LEU A 178 N THR A 160 SHEET 1 G 5 TYR A 169 ALA A 170 0 SHEET 2 G 5 THR A 160 TYR A 166 -1 N TYR A 166 O TYR A 169 SHEET 3 G 5 GLY A 150 SER A 155 -1 N VAL A 152 O VAL A 163 SHEET 4 G 5 ASN A 297 SER A 300 1 O VAL A 298 N LEU A 153 SHEET 5 G 5 ILE A 329 ILE A 330 1 O ILE A 330 N ASN A 297 SHEET 1 H 2 LYS A 238 GLU A 241 0 SHEET 2 H 2 VAL A 247 ILE A 250 -1 O ILE A 248 N TYR A 240
LINK CD CD A1001 O3G ATP A 380 1555 1555 2.46 LINK CD CD A1001 O2B ATP A 380 1555 1555 2.45 LINK CD CD A1004 OD1 ASP A 222 1555 1555 2.64 LINK CD CD A1004 OD2 ASP A 222 1555 1555 2.73 LINK CD CD G1002 OD2 ASP G 109 1555 1555 2.55 LINK CD CD G1002 OE1 GLU A 167 1555 1555 2.48 LINK CD CD G1002 OD1 ASP G 109 1555 1555 2.94 LINK CD CD G1002 O GLY G 114 1555 1555 2.52 LINK CD CD G1002 O ALA G 116 1555 1555 2.31 LINK CA CA G1003 OE1 GLU G 97 1555 1555 2.83 LINK CA CA G1003 OE2 GLU G 97 1555 1555 2.62 LINK CA CA G1003 OD2 ASP G 66 1555 1555 2.44 LINK CA CA G1003 O VAL G 145 1555 1555 2.53 LINK CA CA G1003 O GLY G 65 1555 1555 2.53 LINK CD CD A1004 OE1 GLU A 276 1555 6555 2.64
SITE 1 AC1 1 ATP A 380 SITE 1 AC2 5 GLU A 167 HIS A 173 ASP G 109 GLY G 114 SITE 2 AC2 5 ALA G 116 SITE 1 AC3 4 GLY G 65 ASP G 66 GLU G 97 VAL G 145 SITE 1 AC4 2 ASP A 222 GLU A 276 SITE 1 AC5 21 GLY A 13 SER A 14 GLY A 15 LEU A 16 SITE 2 AC5 21 LYS A 18 GLY A 156 ASP A 157 GLY A 158 SITE 3 AC5 21 VAL A 159 GLY A 182 LYS A 213 GLU A 214 SITE 4 AC5 21 GLY A 301 GLY A 302 THR A 303 MET A 305 SITE 5 AC5 21 LYS A 336 CD A1001 HOH A1012 HOH A1118 SITE 6 AC5 21 HOH A1136
CRYST1 114.220 114.220 93.770 90.00 90.00 120.00 P 31 1 2 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.008755 0.005055 0.000000 0.00000
SCALE2 0.000000 0.010109 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010664 0.00000