10 20 30 40 50 60 70 80 1P4S - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 24-APR-03 1P4S
TITLE SOLUTION STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ADENYLATE TITLE 2 KINASE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLATE KINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATP-AMP TRANSPHOSPHORYLASE; COMPND 5 EC: 2.7.4.3; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: ADK OR RV0733 OR MT0757 OR MTV041.07; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BLI5/PHL20; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22B
KEYWDS ALPHA/BETA, TRANSFERASE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR S.MIRON,H.MUNIER-LEHMANN,C.T.CRAESCU
REVDAT 2 24-FEB-09 1P4S 1 VERSN REVDAT 1 20-JAN-04 1P4S 0
JRNL AUTH S.MIRON,H.MUNIER-LEHMANN,C.T.CRAESCU JRNL TITL STRUCTURAL AND DYNAMIC STUDIES ON LIGAND-FREE JRNL TITL 2 ADENYLATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS JRNL TITL 3 REVEALED A CLOSED CONFORMATION THAT CAN BE RELATED JRNL TITL 4 TO THE REDUCED CATALYTIC ACTIVITY. JRNL REF BIOCHEMISTRY V. 43 67 2004 JRNL REFN ISSN 0006-2960 JRNL PMID 14705932
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : INSIGHT II REMARK 3 AUTHORS : MSI REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A 1809 REMARK 3 ARE NOE-DERIVED DISTANCE CONSTRAINTS, 191 DIHEDRAL ANGLE REMARK 3 RESTRAINTS,159 DISTANCE RESTRAINTS FROM HYDROGEN BONDS.
REMARK 4 REMARK 4 1P4S COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-APR-03. REMARK 100 THE RCSB ID CODE IS RCSB019006.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 7.1 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 1.2 MM ADENYLATE KINASE 15N, REMARK 210 13C, 50MM POTASSIUM PHOSPHATE REMARK 210 BUFFER PH 7.1; 1.0 MM REMARK 210 ADENYLATE KINASE 50MM REMARK 210 POTASSIUM PHOSPHATE BUFFER PH REMARK 210 7.1; 1.2 MM ADENYLATE KINASE REMARK 210 50MM POTASSIUM PHOSPHATE REMARK 210 BUFFER PH 7.1; 1.2 MM REMARK 210 ADENYLATE KINASE 15N, 50MM REMARK 210 POTASSIUM PHOSPHATE BUFFER PH REMARK 210 7.1 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, TOCSY, COSY, 3D 15N REMARK 210 NOESY-HSQC, TOCSY-HSQC, 3D REMARK 210 15N, 13C HNCA, HNCOCA, HNCACB, REMARK 210 HNCOCACB, HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 750 MHZ REMARK 210 SPECTROMETER MODEL : UNITY, INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING PROTOCOL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 RESTRAINT VIOLATIONS AND REMARK 210 LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 12 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 3 HIS A 97 CG HIS A 97 CD2 0.056 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 ARG A 2 N - CA - CB ANGL. DEV. = -10.9 DEGREES REMARK 500 1 ARG A 2 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 1 ARG A 36 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 1 ARG A 37 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 1 VAL A 47 CA - CB - CG1 ANGL. DEV. = 13.4 DEGREES REMARK 500 1 ARG A 51 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 1 ARG A 51 CA - C - O ANGL. DEV. = -34.2 DEGREES REMARK 500 1 ARG A 51 O - C - N ANGL. DEV. = -13.9 DEGREES REMARK 500 1 ARG A 71 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 1 ASN A 74 N - CA - C ANGL. DEV. = 16.8 DEGREES REMARK 500 1 ARG A 88 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 1 HIS A 97 ND1 - CE1 - NE2 ANGL. DEV. = 8.7 DEGREES REMARK 500 1 ARG A 102 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 1 ARG A 103 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 1 ARG A 114 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 1 VAL A 119 CA - CB - CG2 ANGL. DEV. = 13.6 DEGREES REMARK 500 1 ARG A 123 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 1 LEU A 124 N - CA - C ANGL. DEV. = 18.6 DEGREES REMARK 500 1 LEU A 124 C - N - CA ANGL. DEV. = 18.5 DEGREES REMARK 500 1 ARG A 127 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 1 ARG A 129 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 1 ARG A 140 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 1 ARG A 145 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 1 ARG A 156 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 1 ARG A 174 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 1 ARG A 177 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 2 ARG A 2 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 2 ARG A 36 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 2 ARG A 37 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 2 VAL A 47 CA - CB - CG1 ANGL. DEV. = 12.6 DEGREES REMARK 500 2 ARG A 51 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 2 ARG A 51 CA - C - O ANGL. DEV. = -33.9 DEGREES REMARK 500 2 TYR A 52 CB - CG - CD2 ANGL. DEV. = -4.7 DEGREES REMARK 500 2 TYR A 52 CB - CG - CD1 ANGL. DEV. = 4.2 DEGREES REMARK 500 2 ARG A 51 O - C - N ANGL. DEV. = -13.4 DEGREES REMARK 500 2 ARG A 71 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 2 ARG A 88 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 2 HIS A 97 ND1 - CE1 - NE2 ANGL. DEV. = 8.8 DEGREES REMARK 500 2 ARG A 102 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 2 ARG A 103 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 2 ARG A 114 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 2 ARG A 123 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 2 ARG A 127 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 2 ARG A 129 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 2 ARG A 140 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 2 ARG A 145 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 2 LEU A 152 CA - CB - CG ANGL. DEV. = 17.3 DEGREES REMARK 500 2 TYR A 154 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 2 ARG A 156 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 2 ARG A 174 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 504 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 11 -46.27 -27.29 REMARK 500 1 LYS A 13 -78.09 -172.47 REMARK 500 1 LYS A 44 -41.49 105.84 REMARK 500 1 TYR A 52 -66.22 -27.64 REMARK 500 1 ASN A 74 -28.11 -32.26 REMARK 500 1 PHE A 81 138.93 -176.18 REMARK 500 1 PRO A 87 70.97 -68.79 REMARK 500 1 ASP A 108 -77.04 -100.25 REMARK 500 1 ARG A 123 47.74 -25.15 REMARK 500 1 LEU A 124 27.13 36.04 REMARK 500 1 ARG A 127 110.51 153.30 REMARK 500 1 ARG A 129 -157.25 -146.24 REMARK 500 1 ALA A 130 56.92 -149.88 REMARK 500 1 THR A 133 -165.72 -57.14 REMARK 500 1 ASP A 134 -62.45 70.64 REMARK 500 1 MET A 168 -65.31 -91.39 REMARK 500 1 LEU A 179 -60.03 -102.29 REMARK 500 2 LYS A 13 -92.94 64.80 REMARK 500 2 THR A 43 -65.62 -92.16 REMARK 500 2 LYS A 44 -55.68 128.81 REMARK 500 2 ASN A 73 8.64 -66.81 REMARK 500 2 PHE A 81 135.76 178.58 REMARK 500 2 PRO A 87 70.87 -65.30 REMARK 500 2 ASP A 108 -68.04 -90.33 REMARK 500 2 ARG A 127 -115.61 -150.13 REMARK 500 2 ARG A 129 128.16 158.01 REMARK 500 2 ASP A 132 57.90 -91.54 REMARK 500 2 THR A 133 -118.33 -129.32 REMARK 500 2 GLU A 147 26.73 -140.34 REMARK 500 3 ALA A 11 -80.49 -72.13 REMARK 500 3 LYS A 13 -84.71 153.56 REMARK 500 3 THR A 43 125.29 49.45 REMARK 500 3 LYS A 44 -24.12 -142.46 REMARK 500 3 TYR A 52 -62.23 -28.28 REMARK 500 3 PHE A 81 132.53 -172.63 REMARK 500 3 PRO A 87 72.64 -67.53 REMARK 500 3 ASP A 108 -65.58 -97.76 REMARK 500 3 ARG A 127 -94.92 -149.12 REMARK 500 3 ALA A 130 45.87 -95.10 REMARK 500 3 THR A 133 -79.50 -5.35 REMARK 500 4 LYS A 13 -74.87 170.56 REMARK 500 4 LYS A 44 -40.52 105.87 REMARK 500 4 ASP A 62 -46.12 81.89 REMARK 500 4 ASN A 73 23.43 -75.80 REMARK 500 4 PHE A 81 135.32 -178.39 REMARK 500 4 PRO A 87 70.70 -66.13 REMARK 500 4 ASP A 108 -76.23 -96.50 REMARK 500 4 ARG A 129 112.03 -164.40 REMARK 500 4 ASP A 132 62.00 -116.62 REMARK 500 4 THR A 133 -109.79 -140.45 REMARK 500 4 ALA A 164 101.31 -162.24 REMARK 500 5 LYS A 13 -74.53 -159.61 REMARK 500 5 LYS A 44 -41.54 107.77 REMARK 500 5 ASP A 57 -127.09 -83.78 REMARK 500 5 ASP A 62 -38.39 77.27 REMARK 500 5 ASN A 73 0.40 -58.90 REMARK 500 5 ASN A 74 -144.90 -59.26 REMARK 500 5 PRO A 75 38.79 -59.11 REMARK 500 5 PHE A 81 139.21 171.75 REMARK 500 5 ARG A 88 24.28 41.64 REMARK 500 5 SER A 89 153.64 103.99 REMARK 500 5 ARG A 127 111.13 178.59 REMARK 500 5 ARG A 129 100.32 -160.92 REMARK 500 5 ASP A 131 -92.32 66.89 REMARK 500 5 ASP A 132 -58.16 82.88 REMARK 500 5 THR A 133 -68.66 -27.78 REMARK 500 5 VAL A 165 -127.39 -101.90 REMARK 500 5 THR A 167 94.71 60.50 REMARK 500 5 MET A 168 -91.70 86.94 REMARK 500 6 ALA A 11 -71.17 -84.76 REMARK 500 6 LYS A 13 -85.47 -175.48 REMARK 500 6 THR A 43 -65.59 -90.80 REMARK 500 6 LYS A 44 -57.13 130.27 REMARK 500 6 TYR A 52 -68.81 -26.47 REMARK 500 6 ALA A 55 46.33 -158.24 REMARK 500 6 ASP A 57 -115.05 75.56 REMARK 500 6 ASN A 73 8.10 -68.84 REMARK 500 6 PHE A 81 131.87 -173.44 REMARK 500 6 PRO A 87 68.63 -69.30 REMARK 500 6 ASP A 108 -67.77 -97.51 REMARK 500 6 ARG A 127 89.60 161.99 REMARK 500 6 ARG A 129 -97.00 167.65 REMARK 500 6 ALA A 130 -44.92 -151.29 REMARK 500 6 ASP A 132 61.48 -117.97 REMARK 500 6 THR A 133 -112.50 -140.09 REMARK 500 6 ALA A 164 -132.35 -125.61 REMARK 500 6 VAL A 165 133.69 72.24 REMARK 500 7 PRO A 9 109.83 -52.18 REMARK 500 7 LYS A 13 -73.13 -137.19 REMARK 500 7 GLN A 28 109.11 -58.81 REMARK 500 7 LYS A 44 -40.04 104.84 REMARK 500 7 TYR A 52 -64.46 -27.38 REMARK 500 7 ALA A 55 41.63 -153.03 REMARK 500 7 ASP A 57 -117.70 71.51 REMARK 500 7 ASP A 62 -44.43 86.09 REMARK 500 7 ASN A 73 1.77 -57.45 REMARK 500 7 ASN A 74 -132.52 -48.10 REMARK 500 7 PRO A 75 40.34 -62.74 REMARK 500 7 ALA A 77 -1.05 82.32 REMARK 500 7 PHE A 81 132.63 -170.46 REMARK 500 7 PRO A 87 59.67 -60.59 REMARK 500 7 ASP A 108 -70.32 -95.12 REMARK 500 7 ARG A 129 163.40 170.72 REMARK 500 7 ALA A 130 -38.96 -157.69 REMARK 500 7 ASP A 131 -74.24 -59.94 REMARK 500 7 ASP A 132 40.70 38.47 REMARK 500 7 THR A 133 101.54 14.86 REMARK 500 7 ASP A 134 -67.69 -136.16 REMARK 500 7 GLU A 147 13.84 -145.43 REMARK 500 7 THR A 167 60.66 -158.52 REMARK 500 7 MET A 168 -35.39 -159.31 REMARK 500 7 ASP A 169 -37.62 80.79 REMARK 500 7 LEU A 179 -60.46 -99.65 REMARK 500 8 LYS A 13 -54.77 78.26 REMARK 500 8 LYS A 44 -40.36 104.56 REMARK 500 8 ASN A 74 -120.54 -8.87 REMARK 500 8 PRO A 75 27.29 -64.94 REMARK 500 8 PRO A 87 71.61 -62.08 REMARK 500 8 ARG A 103 41.72 -174.92 REMARK 500 8 ASP A 108 -70.40 -96.92 REMARK 500 8 ARG A 129 -162.11 73.43 REMARK 500 8 THR A 133 108.57 36.69 REMARK 500 8 ASP A 134 -72.85 -151.51 REMARK 500 8 GLU A 147 42.33 -142.55 REMARK 500 8 LEU A 159 156.81 -39.73 REMARK 500 8 ALA A 164 -138.01 -105.41 REMARK 500 8 VAL A 165 92.26 9.76 REMARK 500 8 MET A 168 -68.08 74.62 REMARK 500 9 LYS A 13 59.26 -94.73 REMARK 500 9 THR A 43 -66.40 -96.18 REMARK 500 9 LYS A 44 -54.97 124.88 REMARK 500 9 ASP A 57 -135.94 -103.29 REMARK 500 9 ASP A 62 -47.11 83.17 REMARK 500 9 ASN A 74 -129.05 -73.17 REMARK 500 9 PRO A 75 40.06 -60.71 REMARK 500 9 ALA A 77 -3.35 84.24 REMARK 500 9 PHE A 81 135.84 -171.39 REMARK 500 9 PRO A 87 68.71 -68.41 REMARK 500 9 ASP A 108 -72.00 -103.32 REMARK 500 9 VAL A 115 141.10 179.35 REMARK 500 9 SER A 116 133.11 59.34 REMARK 500 9 ARG A 127 -73.03 -150.50 REMARK 500 9 ARG A 129 -143.51 71.33 REMARK 500 9 ASP A 131 -90.97 75.94 REMARK 500 9 ASP A 132 -56.19 74.30 REMARK 500 9 THR A 133 -113.17 -55.26 REMARK 500 9 ASP A 134 -64.05 72.49 REMARK 500 9 ALA A 164 -101.74 -99.34 REMARK 500 9 VAL A 165 95.22 -57.54 REMARK 500 9 MET A 168 -57.77 80.02 REMARK 500 10 PRO A 8 -177.68 -57.91 REMARK 500 10 ALA A 11 -98.18 53.48 REMARK 500 10 LYS A 13 -33.28 -152.17 REMARK 500 10 THR A 43 -65.47 -91.55 REMARK 500 10 LYS A 44 -55.76 128.30 REMARK 500 10 ASP A 57 -142.94 -119.31 REMARK 500 10 ASP A 62 -45.18 81.04 REMARK 500 10 ASN A 74 -127.58 -5.35 REMARK 500 10 PRO A 75 36.77 -68.38 REMARK 500 10 PHE A 81 136.75 -175.89 REMARK 500 10 PRO A 87 70.04 -60.87 REMARK 500 10 ASP A 108 -74.27 -99.33 REMARK 500 10 ARG A 127 -85.19 -172.56 REMARK 500 10 ARG A 129 -144.37 -154.09 REMARK 500 10 ALA A 130 -25.74 -151.31 REMARK 500 10 ASP A 131 -43.60 81.10 REMARK 500 10 ALA A 164 118.93 -163.61 REMARK 500 11 LYS A 13 -90.20 94.59 REMARK 500 11 LYS A 44 -41.64 105.96 REMARK 500 11 ASP A 57 -132.44 -101.48 REMARK 500 11 ASN A 73 4.76 -68.67 REMARK 500 11 ASN A 74 -156.67 -44.33 REMARK 500 11 PRO A 75 25.74 -40.20 REMARK 500 11 PRO A 87 66.51 -67.56 REMARK 500 11 ASP A 108 -77.45 -98.32 REMARK 500 11 ARG A 129 126.48 101.90 REMARK 500 11 THR A 133 -115.39 -143.00 REMARK 500 11 ALA A 164 99.89 -160.26 REMARK 500 12 PRO A 8 175.41 -57.45 REMARK 500 12 ALA A 11 -111.60 64.02 REMARK 500 12 LYS A 44 -41.37 106.17 REMARK 500 12 ASP A 57 -132.23 -100.28 REMARK 500 12 ASN A 73 45.42 -72.02 REMARK 500 12 ASN A 74 90.71 74.33 REMARK 500 12 PRO A 75 37.04 -80.92 REMARK 500 12 PHE A 81 132.14 -177.60 REMARK 500 12 PRO A 87 63.79 -66.74 REMARK 500 12 ASP A 108 -71.66 -97.95 REMARK 500 12 ARG A 127 -73.42 -76.77 REMARK 500 12 ARG A 129 101.35 108.41 REMARK 500 12 ALA A 130 30.92 -98.25 REMARK 500 12 MET A 168 -60.17 -91.97 REMARK 500 13 LYS A 13 -82.57 80.36 REMARK 500 13 LYS A 44 -41.42 106.24 REMARK 500 13 ASP A 57 -164.53 -118.75 REMARK 500 13 ASP A 62 -52.81 83.05 REMARK 500 13 PHE A 81 133.83 -175.52 REMARK 500 13 TYR A 86 -66.84 -104.68 REMARK 500 13 PRO A 87 60.38 -63.13 REMARK 500 13 ASP A 108 -66.92 -94.27 REMARK 500 13 ARG A 127 -148.24 80.59 REMARK 500 13 ARG A 129 -101.57 -155.99 REMARK 500 13 ALA A 130 -45.07 -148.24 REMARK 500 13 ASP A 132 62.53 -116.72 REMARK 500 13 THR A 133 -114.97 -138.29 REMARK 500 13 LEU A 159 143.04 -39.26 REMARK 500 14 PRO A 9 106.81 -54.45 REMARK 500 14 ALA A 11 76.59 39.88 REMARK 500 14 LYS A 13 -92.29 164.44 REMARK 500 14 LYS A 23 51.93 -53.26 REMARK 500 14 LYS A 44 -40.53 103.62 REMARK 500 14 TYR A 52 -69.12 -26.28 REMARK 500 14 ALA A 55 44.41 -155.21 REMARK 500 14 ASP A 57 -112.94 72.49 REMARK 500 14 ASN A 73 8.07 -66.06 REMARK 500 14 PHE A 81 142.00 179.58 REMARK 500 14 TYR A 86 -62.62 -93.37 REMARK 500 14 PRO A 87 56.99 -63.60 REMARK 500 14 ASP A 108 -70.95 -98.44 REMARK 500 14 VAL A 115 146.41 -179.00 REMARK 500 14 SER A 116 -79.98 56.50 REMARK 500 14 GLU A 117 -34.55 78.02 REMARK 500 14 ARG A 127 91.58 92.71 REMARK 500 14 ARG A 129 -118.11 -156.23 REMARK 500 14 THR A 133 -110.08 -135.26 REMARK 500 14 GLU A 147 -4.76 -142.22 REMARK 500 14 THR A 161 -151.06 -124.44 REMARK 500 14 ALA A 164 -120.39 -103.90 REMARK 500 14 VAL A 165 91.07 -29.01 REMARK 500 14 MET A 168 -64.48 80.57 REMARK 500 15 LYS A 44 -38.75 97.67 REMARK 500 15 PRO A 60 170.10 -57.63 REMARK 500 15 ASP A 62 -51.01 80.55 REMARK 500 15 ASN A 74 -32.91 -30.53 REMARK 500 15 PHE A 81 135.74 -173.98 REMARK 500 15 PRO A 87 50.25 -61.88 REMARK 500 15 ASP A 108 -69.45 -95.78 REMARK 500 15 ARG A 127 93.38 76.14 REMARK 500 15 ASP A 131 12.09 57.72 REMARK 500 15 THR A 133 -118.83 -140.55 REMARK 500 15 ALA A 164 -159.80 -151.53 REMARK 500 15 VAL A 165 178.94 58.28 REMARK 500 16 LYS A 13 -65.63 -158.34 REMARK 500 16 LYS A 44 -39.16 102.35 REMARK 500 16 ASP A 57 -132.47 -105.73 REMARK 500 16 TYR A 86 -66.14 -107.24 REMARK 500 16 PRO A 87 47.97 -61.79 REMARK 500 16 ASP A 108 -68.21 -93.42 REMARK 500 16 ARG A 127 91.76 154.25 REMARK 500 16 ARG A 129 -128.99 89.60 REMARK 500 16 THR A 133 -117.55 -143.70 REMARK 500 17 ALA A 11 -83.47 48.45 REMARK 500 17 LYS A 13 -83.80 78.28 REMARK 500 17 LYS A 44 -40.98 103.99 REMARK 500 17 TYR A 52 -66.53 -24.28 REMARK 500 17 ALA A 55 43.86 -158.42 REMARK 500 17 ASP A 57 -118.46 76.37 REMARK 500 17 ASN A 74 -170.44 -52.58 REMARK 500 17 PRO A 75 39.86 -35.60 REMARK 500 17 PHE A 81 134.42 -170.09 REMARK 500 17 PRO A 87 60.03 -61.18 REMARK 500 17 ASP A 108 -68.37 -97.75 REMARK 500 17 ARG A 127 96.07 107.13 REMARK 500 17 ARG A 129 95.88 -165.30 REMARK 500 17 THR A 133 -113.24 -139.05 REMARK 500 17 GLU A 147 23.08 -141.99 REMARK 500 17 THR A 161 -153.31 -131.44 REMARK 500 18 PRO A 8 173.95 -55.39 REMARK 500 18 LYS A 13 -88.03 79.35 REMARK 500 18 LYS A 44 -42.37 110.61 REMARK 500 18 ASP A 57 -132.53 -105.17 REMARK 500 18 ASP A 62 -51.53 80.33 REMARK 500 18 ASN A 74 -48.47 -15.57 REMARK 500 18 PHE A 81 136.95 -175.83 REMARK 500 18 PRO A 87 61.50 -59.66 REMARK 500 18 ASP A 108 -61.80 -96.08 REMARK 500 18 ARG A 127 -93.04 -151.98 REMARK 500 18 ARG A 129 101.34 82.45 REMARK 500 18 GLU A 147 10.03 -141.33 REMARK 500 18 LYS A 160 -154.15 -92.88 REMARK 500 18 THR A 161 -164.83 -30.93 REMARK 500 18 ALA A 164 -146.03 -143.37 REMARK 500 18 VAL A 165 170.20 59.14 REMARK 500 18 THR A 167 86.82 36.31 REMARK 500 18 MET A 168 -114.01 -159.24 REMARK 500 19 LYS A 13 -69.58 -153.10 REMARK 500 19 THR A 43 -62.81 -96.45 REMARK 500 19 LYS A 44 -42.75 115.83 REMARK 500 19 ASP A 62 -52.03 82.09 REMARK 500 19 ASN A 73 8.37 -68.77 REMARK 500 19 PHE A 81 135.04 -179.08 REMARK 500 19 PRO A 87 70.89 -63.22 REMARK 500 19 ASP A 108 -75.15 -98.55 REMARK 500 19 ARG A 127 134.46 -38.66 REMARK 500 19 ARG A 129 -138.31 73.53 REMARK 500 19 THR A 133 117.92 -0.35 REMARK 500 19 ASP A 134 -42.45 76.69 REMARK 500 19 GLU A 147 -37.31 -132.90 REMARK 500 19 VAL A 165 -127.79 -111.17 REMARK 500 19 THR A 167 80.12 59.51 REMARK 500 19 MET A 168 -75.51 78.01 REMARK 500 20 ALA A 11 159.29 -33.11 REMARK 500 20 LYS A 13 -75.09 -152.30 REMARK 500 20 THR A 43 -60.24 -91.62 REMARK 500 20 LYS A 44 -40.88 114.44 REMARK 500 20 ASP A 57 -129.69 -93.55 REMARK 500 20 ASN A 73 37.06 -77.95 REMARK 500 20 PRO A 87 72.06 -66.41 REMARK 500 20 ASP A 108 -73.29 -98.97 REMARK 500 20 ARG A 127 -86.71 108.76 REMARK 500 20 ASP A 131 -76.92 -56.42 REMARK 500 20 ASP A 132 42.57 35.51 REMARK 500 20 THR A 133 116.67 8.70 REMARK 500 20 GLU A 147 22.82 -148.84 REMARK 500 20 VAL A 165 -115.31 69.50 REMARK 500 20 THR A 167 -153.05 -129.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG A 51 TYR A 52 1 146.00 REMARK 500 ARG A 51 TYR A 52 2 149.35 REMARK 500 THR A 43 LYS A 44 3 146.13 REMARK 500 ARG A 51 TYR A 52 3 147.99 REMARK 500 ARG A 51 TYR A 52 4 146.73 REMARK 500 ARG A 51 TYR A 52 5 148.90 REMARK 500 ARG A 51 TYR A 52 6 146.51 REMARK 500 ARG A 51 TYR A 52 7 146.49 REMARK 500 ARG A 51 TYR A 52 9 146.86 REMARK 500 ARG A 51 TYR A 52 10 147.87 REMARK 500 ARG A 51 TYR A 52 11 146.74 REMARK 500 ARG A 51 TYR A 52 12 146.54 REMARK 500 ASN A 73 ASN A 74 12 146.57 REMARK 500 ASN A 74 PRO A 75 12 149.52 REMARK 500 ARG A 51 TYR A 52 13 145.85 REMARK 500 ARG A 51 TYR A 52 14 144.03 REMARK 500 LYS A 160 THR A 161 14 149.51 REMARK 500 ASP A 163 ALA A 164 14 -147.66 REMARK 500 ARG A 51 TYR A 52 15 147.87 REMARK 500 ARG A 51 TYR A 52 16 146.22 REMARK 500 ARG A 51 TYR A 52 17 145.52 REMARK 500 LYS A 160 THR A 161 17 149.93 REMARK 500 ARG A 51 TYR A 52 18 147.21 REMARK 500 LYS A 160 THR A 161 18 -146.10 REMARK 500 THR A 161 VAL A 162 18 -146.69 REMARK 500 VAL A 165 GLY A 166 18 -149.19 REMARK 500 ARG A 51 TYR A 52 19 145.21 REMARK 500 ARG A 51 TYR A 52 20 146.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 TYR A 154 0.07 SIDE_CHAIN REMARK 500 1 TYR A 155 0.08 SIDE_CHAIN REMARK 500 2 ARG A 2 0.09 SIDE_CHAIN REMARK 500 2 TYR A 52 0.08 SIDE_CHAIN REMARK 500 2 TYR A 154 0.10 SIDE_CHAIN REMARK 500 2 TYR A 155 0.08 SIDE_CHAIN REMARK 500 3 TYR A 154 0.11 SIDE_CHAIN REMARK 500 3 TYR A 155 0.08 SIDE_CHAIN REMARK 500 4 TYR A 154 0.09 SIDE_CHAIN REMARK 500 4 TYR A 155 0.08 SIDE_CHAIN REMARK 500 5 TYR A 52 0.12 SIDE_CHAIN REMARK 500 5 TYR A 86 0.07 SIDE_CHAIN REMARK 500 5 TYR A 154 0.09 SIDE_CHAIN REMARK 500 6 TYR A 155 0.07 SIDE_CHAIN REMARK 500 7 PHE A 35 0.08 SIDE_CHAIN REMARK 500 7 TYR A 154 0.07 SIDE_CHAIN REMARK 500 7 TYR A 155 0.11 SIDE_CHAIN REMARK 500 8 TYR A 154 0.07 SIDE_CHAIN REMARK 500 9 TYR A 86 0.08 SIDE_CHAIN REMARK 500 9 ARG A 88 0.08 SIDE_CHAIN REMARK 500 9 TYR A 155 0.09 SIDE_CHAIN REMARK 500 10 TYR A 155 0.09 SIDE_CHAIN REMARK 500 11 TYR A 154 0.11 SIDE_CHAIN REMARK 500 11 TYR A 155 0.10 SIDE_CHAIN REMARK 500 12 TYR A 154 0.10 SIDE_CHAIN REMARK 500 12 TYR A 155 0.10 SIDE_CHAIN REMARK 500 14 TYR A 155 0.09 SIDE_CHAIN REMARK 500 15 TYR A 154 0.08 SIDE_CHAIN REMARK 500 15 TYR A 155 0.11 SIDE_CHAIN REMARK 500 16 TYR A 154 0.08 SIDE_CHAIN REMARK 500 16 TYR A 155 0.12 SIDE_CHAIN REMARK 500 17 TYR A 155 0.13 SIDE_CHAIN REMARK 500 18 TYR A 154 0.08 SIDE_CHAIN REMARK 500 18 TYR A 155 0.10 SIDE_CHAIN REMARK 500 19 TYR A 155 0.09 SIDE_CHAIN REMARK 500 20 TYR A 155 0.10 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 1 ARG A 51 46.21 REMARK 500 2 ARG A 51 46.09 REMARK 500 3 ARG A 51 47.42 REMARK 500 4 ARG A 51 46.26 REMARK 500 5 ARG A 51 49.92 REMARK 500 6 ARG A 51 44.21 REMARK 500 7 ARG A 51 45.97 REMARK 500 8 ARG A 51 -41.92 REMARK 500 9 ARG A 51 45.91 REMARK 500 10 ARG A 51 48.31 REMARK 500 11 ARG A 51 46.73 REMARK 500 12 ARG A 51 46.52 REMARK 500 13 ARG A 51 47.97 REMARK 500 14 LYS A 23 -19.85 REMARK 500 14 ARG A 51 45.13 REMARK 500 15 ARG A 51 45.47 REMARK 500 16 ARG A 51 44.98 REMARK 500 17 ARG A 51 45.10 REMARK 500 17 LYS A 160 11.50 REMARK 500 18 ARG A 51 46.50 REMARK 500 18 THR A 161 17.37 REMARK 500 19 ARG A 51 46.58 REMARK 500 20 ARG A 51 46.23 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1P4S A 1 181 UNP P69440 KAD_MYCTU 1 181
SEQRES 1 A 181 MET ARG VAL LEU LEU LEU GLY PRO PRO GLY ALA GLY LYS SEQRES 2 A 181 GLY THR GLN ALA VAL LYS LEU ALA GLU LYS LEU GLY ILE SEQRES 3 A 181 PRO GLN ILE SER THR GLY GLU LEU PHE ARG ARG ASN ILE SEQRES 4 A 181 GLU GLU GLY THR LYS LEU GLY VAL GLU ALA LYS ARG TYR SEQRES 5 A 181 LEU ASP ALA GLY ASP LEU VAL PRO SER ASP LEU THR ASN SEQRES 6 A 181 GLU LEU VAL ASP ASP ARG LEU ASN ASN PRO ASP ALA ALA SEQRES 7 A 181 ASN GLY PHE ILE LEU ASP GLY TYR PRO ARG SER VAL GLU SEQRES 8 A 181 GLN ALA LYS ALA LEU HIS GLU MET LEU GLU ARG ARG GLY SEQRES 9 A 181 THR ASP ILE ASP ALA VAL LEU GLU PHE ARG VAL SER GLU SEQRES 10 A 181 GLU VAL LEU LEU GLU ARG LEU LYS GLY ARG GLY ARG ALA SEQRES 11 A 181 ASP ASP THR ASP ASP VAL ILE LEU ASN ARG MET LYS VAL SEQRES 12 A 181 TYR ARG ASP GLU THR ALA PRO LEU LEU GLU TYR TYR ARG SEQRES 13 A 181 ASP GLN LEU LYS THR VAL ASP ALA VAL GLY THR MET ASP SEQRES 14 A 181 GLU VAL PHE ALA ARG ALA LEU ARG ALA LEU GLY LYS
HELIX 1 1 LYS A 13 GLY A 25 1 13 HELIX 2 2 GLY A 32 GLY A 42 1 11 HELIX 3 3 LYS A 44 ASP A 54 1 11 HELIX 4 4 PRO A 60 ASN A 73 1 14 HELIX 5 5 SER A 89 GLU A 101 1 13 HELIX 6 6 GLU A 117 ARG A 123 1 7 HELIX 7 7 ASP A 134 LEU A 159 1 26 HELIX 8 8 MET A 168 LEU A 179 1 12
SHEET 1 A 5 GLN A 28 SER A 30 0 SHEET 2 A 5 ILE A 82 ASP A 84 1 O ILE A 82 N ILE A 29 SHEET 3 A 5 VAL A 3 LEU A 6 1 N VAL A 3 O LEU A 83 SHEET 4 A 5 ALA A 109 ARG A 114 1 O LEU A 111 N LEU A 4 SHEET 5 A 5 LYS A 160 ASP A 163 1 O VAL A 162 N ARG A 114
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000