10 20 30 40 50 60 70 80 1OUQ - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric Unit
HEADER REPLICATION/DNA 25-MAR-03 1OUQ
TITLE CRYSTAL STRUCTURE OF WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: LOXP DNA; COMPND 3 CHAIN: C, G; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: FIRST STRAND OF LOXP SITE, 5'-END; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: LOXP DNA; COMPND 8 CHAIN: X, Y; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: FIRST STRAND OF LOXP SITE, 3'-END; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: LOXP DNA; COMPND 13 CHAIN: D, H; COMPND 14 ENGINEERED: YES; COMPND 15 OTHER_DETAILS: SECOND STRAND OF LOXP SITE; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: CRE RECOMBINASE; COMPND 18 CHAIN: A, B, E, F; COMPND 19 SYNONYM: GST-LOXP-CRE RECOMBINASE FUSION PROTEIN; COMPND 20 RETROFITTING VECTOR PRETROES; COMPND 21 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 SYNTHETIC: YES; SOURCE 7 MOL_ID: 4; SOURCE 8 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE P1; SOURCE 9 ORGANISM_TAXID: 10678; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PGEM
KEYWDS CRE, RECOMBINASE, DNA, REPLICATION/DNA COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR E.ENNIFAR,J.E.W.MEYER,F.BUCHHOLZ,A.F.STEWART,D.SUCK
REVDAT 2 24-FEB-09 1OUQ 1 VERSN REVDAT 1 16-SEP-03 1OUQ 0
JRNL AUTH E.ENNIFAR,J.E.W.MEYER,F.BUCHHOLZ,A.F.STEWART,D.SUCK JRNL TITL CRYSTAL STRUCTURE OF A WILD-TYPE CRE JRNL TITL 2 RECOMBINASE-LOXP SYNAPSE REVEALS A NOVEL SPACER JRNL TITL 3 CONFORMATION SUGGESTING AN ALTERNATIVE MECHANISM JRNL TITL 4 FOR DNA CLEAVAGE ACTIVATION JRNL REF NUCLEIC ACIDS RES. V. 31 5449 2003 JRNL REFN ISSN 0305-1048 JRNL PMID 12954782 JRNL DOI 10.1093/NAR/GKG732
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.7 REMARK 3 NUMBER OF REFLECTIONS : 51908 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2626 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.39 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7413 REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 369 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.018 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10264 REMARK 3 NUCLEIC ACID ATOMS : 3020 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 3 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 63.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.46000 REMARK 3 B22 (A**2) : 8.36000 REMARK 3 B33 (A**2) : -9.83000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.46 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.53 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.022 REMARK 3 BOND ANGLES (DEGREES) : 1.90 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.32 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.520 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.740 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.010 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.390 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 55.79 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : WATER.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1OUQ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAR-03. REMARK 100 THE RCSB ID CODE IS RCSB018683.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-NOV-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51910 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 8.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.15400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1NZB REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NACL, EDTA, GLYCEROL, HEPES, MGCL2, REMARK 280 PEG 2000, MME, PH 7.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 54.75000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 96.85000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 82.80000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 96.85000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.75000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 82.80000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: DIMERIC CRE RECOMBINASE COVALENTLY LINKED TO A LOXP DNA REMARK 300 THROUGH A 3'-PHOSPHOTYROSINE
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, X, D, G, Y, H, A, B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASN A 3 REMARK 465 LEU A 4 REMARK 465 LEU A 5 REMARK 465 THR A 6 REMARK 465 VAL A 7 REMARK 465 HIS A 8 REMARK 465 GLN A 9 REMARK 465 GLY A 342 REMARK 465 ASP A 343 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASN B 3 REMARK 465 LEU B 4 REMARK 465 LEU B 5 REMARK 465 THR B 6 REMARK 465 VAL B 7 REMARK 465 HIS B 8 REMARK 465 GLN B 9 REMARK 465 ASN B 10 REMARK 465 LEU B 11 REMARK 465 PRO B 12 REMARK 465 ALA B 13 REMARK 465 LEU B 14 REMARK 465 PRO B 15 REMARK 465 VAL B 16 REMARK 465 ASP B 17 REMARK 465 ALA B 18 REMARK 465 THR B 19 REMARK 465 GLY B 342 REMARK 465 ASP B 343 REMARK 465 MET E 1 REMARK 465 SER E 2 REMARK 465 ASN E 3 REMARK 465 LEU E 4 REMARK 465 LEU E 5 REMARK 465 THR E 6 REMARK 465 VAL E 7 REMARK 465 HIS E 8 REMARK 465 GLN E 9 REMARK 465 ASN E 10 REMARK 465 LEU E 11 REMARK 465 PRO E 12 REMARK 465 ALA E 13 REMARK 465 LEU E 14 REMARK 465 PRO E 15 REMARK 465 VAL E 16 REMARK 465 ASP E 17 REMARK 465 ALA E 18 REMARK 465 THR E 19 REMARK 465 SER E 20 REMARK 465 GLY E 342 REMARK 465 ASP E 343 REMARK 465 MET F 1 REMARK 465 SER F 2 REMARK 465 ASN F 3 REMARK 465 LEU F 4 REMARK 465 LEU F 5 REMARK 465 THR F 6 REMARK 465 VAL F 7 REMARK 465 HIS F 8 REMARK 465 GLN F 9 REMARK 465 ASN F 10 REMARK 465 LEU F 11 REMARK 465 PRO F 12 REMARK 465 ALA F 13 REMARK 465 LEU F 14 REMARK 465 PRO F 15 REMARK 465 VAL F 16 REMARK 465 ASP F 17 REMARK 465 ALA F 18 REMARK 465 THR F 19 REMARK 465 GLY F 342 REMARK 465 ASP F 343
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 A3P C 115 O6P O2' REMARK 470 A3P G 115 O6P O2'
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1P A3P C 115 OH TYR B 324 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT X 118 C5' DT X 118 C4' 0.047 REMARK 500 DT X 118 C5 DT X 118 C7 0.036 REMARK 500 DT X 120 C5 DT X 120 C7 0.051 REMARK 500 DG Y 117 C5' DG Y 117 C4' 0.059 REMARK 500 DT Y 118 C5' DT Y 118 C4' 0.060 REMARK 500 DT Y 118 C5 DT Y 118 C7 0.046 REMARK 500 DA Y 119 C5' DA Y 119 C4' 0.070 REMARK 500 DT Y 120 C5' DT Y 120 C4' 0.045 REMARK 500 DT Y 120 C5 DT Y 120 C7 0.050 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT X 116 C5' - C4' - C3' ANGL. DEV. = 8.1 DEGREES REMARK 500 DA X 119 O4' - C1' - C2' ANGL. DEV. = 4.0 DEGREES REMARK 500 DT X 120 C2' - C3' - O3' ANGL. DEV. = -15.3 DEGREES REMARK 500 DT X 120 C3' - C2' - C1' ANGL. DEV. = -5.2 DEGREES REMARK 500 DT X 120 N1 - C1' - C2' ANGL. DEV. = 8.5 DEGREES REMARK 500 DT X 120 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DG X 121 C3' - C2' - C1' ANGL. DEV. = -5.2 DEGREES REMARK 500 DG Y 117 O5' - P - OP2 ANGL. DEV. = -5.9 DEGREES REMARK 500 DG Y 117 O4' - C4' - C3' ANGL. DEV. = -4.9 DEGREES REMARK 500 DT Y 118 O4' - C4' - C3' ANGL. DEV. = -5.6 DEGREES REMARK 500 DA Y 119 OP1 - P - OP2 ANGL. DEV. = -9.4 DEGREES REMARK 500 DA Y 119 O4' - C4' - C3' ANGL. DEV. = -2.8 DEGREES REMARK 500 DA Y 119 C3' - C2' - C1' ANGL. DEV. = -6.5 DEGREES REMARK 500 PRO E 105 CA - N - CD ANGL. DEV. = -11.5 DEGREES REMARK 500 TYR F 324 CB - CG - CD2 ANGL. DEV. = 4.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 12 -85.00 -65.67 REMARK 500 ALA A 13 68.39 -164.53 REMARK 500 LEU A 14 100.05 -51.94 REMARK 500 ASP A 21 -106.53 95.28 REMARK 500 LYS A 25 -73.19 -53.25 REMARK 500 ASP A 33 54.79 -105.30 REMARK 500 GLN A 35 4.84 -55.55 REMARK 500 PHE A 64 129.12 -176.28 REMARK 500 PRO A 107 177.60 -59.05 REMARK 500 ASP A 109 10.71 -147.80 REMARK 500 ASN A 111 -52.87 -19.98 REMARK 500 ALA A 178 7.37 -63.21 REMARK 500 VAL A 182 -56.21 -26.54 REMARK 500 LYS A 183 -11.72 -48.17 REMARK 500 MET A 193 162.95 -46.91 REMARK 500 THR A 200 -169.38 -49.35 REMARK 500 SER A 205 88.25 -60.18 REMARK 500 THR A 206 -9.27 -58.89 REMARK 500 GLU A 210 147.07 -176.14 REMARK 500 SER A 214 172.61 -55.94 REMARK 500 ASP A 232 -32.33 -37.65 REMARK 500 LYS A 244 -41.13 -29.89 REMARK 500 ALA A 249 76.50 -154.61 REMARK 500 ALA A 252 12.82 -143.12 REMARK 500 ALA A 275 154.54 -46.41 REMARK 500 ASP A 277 158.36 -39.18 REMARK 500 SER A 279 -157.22 -71.63 REMARK 500 THR A 316 4.56 -156.58 REMARK 500 VAL A 318 -42.37 -23.21 REMARK 500 ILE A 320 -66.32 -90.21 REMARK 500 VAL A 321 -7.97 -52.54 REMARK 500 GLU A 340 58.11 -98.68 REMARK 500 ASP B 33 39.22 -93.93 REMARK 500 ALA B 54 -81.67 -55.47 REMARK 500 TRP B 55 -29.92 -38.10 REMARK 500 LYS B 57 -71.43 -67.06 REMARK 500 LEU B 58 -3.47 -44.73 REMARK 500 PHE B 64 115.97 -175.26 REMARK 500 PRO B 68 -76.54 -27.85 REMARK 500 ARG B 81 6.01 -58.80 REMARK 500 ASN B 111 -25.90 -34.70 REMARK 500 GLU B 129 152.71 -47.07 REMARK 500 ARG B 146 -79.69 -78.40 REMARK 500 SER B 147 83.26 -59.25 REMARK 500 LEU B 148 -13.33 167.49 REMARK 500 MET B 149 -10.68 -145.01 REMARK 500 SER B 152 158.95 -48.17 REMARK 500 ARG B 159 -72.91 -68.59 REMARK 500 ASN B 160 -33.61 -35.22 REMARK 500 LEU B 171 -8.12 71.62 REMARK 500 LEU B 172 153.27 -43.20 REMARK 500 LEU B 194 77.92 -152.19 REMARK 500 ILE B 195 157.15 -49.67 REMARK 500 SER B 214 -175.48 -61.28 REMARK 500 ARG B 223 -75.87 -78.47 REMARK 500 SER B 226 -81.06 -70.77 REMARK 500 VAL B 227 -33.44 -29.51 REMARK 500 ALA B 231 35.63 -91.31 REMARK 500 ASN B 235 41.07 -63.05 REMARK 500 ALA B 248 -158.45 -57.18 REMARK 500 ALA B 249 52.64 171.29 REMARK 500 PRO B 250 166.88 -40.57 REMARK 500 ALA B 252 10.29 -150.82 REMARK 500 LEU B 271 -32.81 -31.47 REMARK 500 ASP B 277 152.15 -49.16 REMARK 500 SER B 279 -0.41 -141.70 REMARK 500 TYR B 283 56.22 34.86 REMARK 500 TRP B 286 145.89 -31.79 REMARK 500 ALA B 312 1.13 -65.84 REMARK 500 ASN B 319 32.19 -75.48 REMARK 500 ILE B 320 -47.64 -138.70 REMARK 500 ARG B 326 52.05 -148.29 REMARK 500 ASN B 327 -172.59 -38.80 REMARK 500 LEU B 328 127.35 -24.83 REMARK 500 SER B 330 -127.12 44.83 REMARK 500 GLU B 331 -8.22 -45.92 REMARK 500 THR B 332 -132.68 42.10 REMARK 500 ALA B 334 -128.15 56.13 REMARK 500 MET B 335 -44.31 -29.18 REMARK 500 LEU E 58 -20.60 156.17 REMARK 500 ASN E 60 77.48 75.15 REMARK 500 LYS E 86 -9.94 -50.96 REMARK 500 ARG E 101 47.33 -73.65 REMARK 500 SER E 102 39.48 -168.69 REMARK 500 ALA E 127 2.27 -60.16 REMARK 500 SER E 147 -79.36 -55.98 REMARK 500 LEU E 148 71.78 -67.83 REMARK 500 MET E 149 -6.71 160.21 REMARK 500 ASN E 151 36.69 -98.23 REMARK 500 ASP E 153 -38.23 -140.93 REMARK 500 ARG E 154 128.29 -38.71 REMARK 500 CYS E 155 -5.58 -54.84 REMARK 500 ASP E 157 -5.00 -49.62 REMARK 500 THR E 170 -6.19 -145.06 REMARK 500 VAL E 182 -64.55 -10.94 REMARK 500 ASP E 189 -4.77 -54.09 REMARK 500 ILE E 197 39.67 -98.50 REMARK 500 THR E 200 -160.61 -64.50 REMARK 500 LYS E 201 44.76 -145.33 REMARK 500 THR E 202 137.90 -179.15 REMARK 500 VAL E 209 14.11 -145.11 REMARK 500 GLU E 210 107.36 -171.49 REMARK 500 SER E 214 -153.66 -66.35 REMARK 500 ASP E 232 -83.88 -27.35 REMARK 500 LYS E 244 -7.20 -51.11 REMARK 500 ALA E 249 77.83 -112.18 REMARK 500 SER E 257 153.37 -14.38 REMARK 500 ALA E 267 -70.84 -64.16 REMARK 500 ASP E 277 -154.65 -59.76 REMARK 500 SER E 279 178.44 -55.44 REMARK 500 TRP E 286 137.12 -28.03 REMARK 500 ALA E 296 -72.42 -40.19 REMARK 500 GLU E 331 39.22 -81.14 REMARK 500 ALA F 54 -73.71 -51.93 REMARK 500 LEU F 58 47.34 -74.07 REMARK 500 ASN F 59 -6.19 -167.82 REMARK 500 PHE F 64 128.75 -172.70 REMARK 500 ARG F 81 -9.69 -56.11 REMARK 500 LYS F 86 -16.73 -49.22 REMARK 500 GLN F 89 -76.68 -51.39 REMARK 500 GLN F 90 -39.56 -27.90 REMARK 500 SER F 108 14.77 -65.53 REMARK 500 ALA F 127 -4.38 -53.02 REMARK 500 ALA F 134 141.84 -23.27 REMARK 500 VAL F 227 -9.20 -46.90 REMARK 500 ALA F 249 74.97 -106.14 REMARK 500 PRO F 250 160.43 -47.58 REMARK 500 ALA F 252 18.93 -154.55 REMARK 500 THR F 268 4.54 -64.73 REMARK 500 LEU F 271 -71.83 -105.56 REMARK 500 ALA F 275 116.35 13.95 REMARK 500 ASP F 277 176.27 -31.55 REMARK 500 TYR F 283 71.56 54.53 REMARK 500 ASP F 298 -27.62 -39.35 REMARK 500 ASN F 323 -73.00 -49.34 REMARK 500 TYR F 324 -4.98 -36.12 REMARK 500 ASN F 327 -179.78 43.81 REMARK 500 LEU F 328 155.98 -29.39 REMARK 500 ASP F 329 -82.02 -141.65 REMARK 500 SER F 330 -95.03 -2.79 REMARK 500 THR F 332 -133.08 76.66 REMARK 500 ALA F 334 -108.66 90.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG X 117 0.06 SIDE_CHAIN REMARK 500 DC D 116 0.06 SIDE_CHAIN REMARK 500 DA D 117 0.07 SIDE_CHAIN REMARK 500 DT D 118 0.08 SIDE_CHAIN REMARK 500 DA D 119 0.06 SIDE_CHAIN REMARK 500 DA D 126 0.08 SIDE_CHAIN REMARK 500 DA G 105 0.08 SIDE_CHAIN REMARK 500 DC G 106 0.07 SIDE_CHAIN REMARK 500 DA H 105 0.06 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 344 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 345 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 346 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 347 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG F 344 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 310
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NZB RELATED DB: PDB REMARK 900 PRE-CLEAVAGE COMPLEX (LOW RESOLUTION) REMARK 900 RELATED ID: 1Q3U RELATED DB: PDB REMARK 900 PRE-CLEAVAGE COMPLEX (HIGH RESOLUTION) REMARK 900 RELATED ID: 1Q3V RELATED DB: PDB REMARK 900 COVALENT INTERMEDIATE (HIGH RESOLUTION)
DBREF 1OUQ A 1 343 UNP P06956 RECR_BPP1 1 343 DBREF 1OUQ B 1 343 UNP P06956 RECR_BPP1 1 343 DBREF 1OUQ E 1 343 UNP P06956 RECR_BPP1 1 343 DBREF 1OUQ F 1 343 UNP P06956 RECR_BPP1 1 343 DBREF 1OUQ C 100 115 PDB 1OUQ 1OUQ 100 115 DBREF 1OUQ X 116 136 PDB 1OUQ 1OUQ 116 136 DBREF 1OUQ D 100 136 PDB 1OUQ 1OUQ 100 136 DBREF 1OUQ G 100 115 PDB 1OUQ 1OUQ 100 115 DBREF 1OUQ Y 116 136 PDB 1OUQ 1OUQ 116 136 DBREF 1OUQ H 100 136 PDB 1OUQ 1OUQ 100 136
SEQRES 1 C 16 DC DG DA DT DA DA DC UMP DT DC DG DT DA SEQRES 2 C 16 DT DA A3P SEQRES 1 X 21 DT DG DT DA DT DG DC DT DA DT DA DC DG SEQRES 2 X 21 DA DA DG DT DT DA DT DC SEQRES 1 D 37 DG DG DA DT DA DA DC DT DT DC DG DT DA SEQRES 2 D 37 DT DA DG DC DA DT DA DC DA DT DT DA DT SEQRES 3 D 37 DA DC DG DA DA DG DT DT DA DT DC SEQRES 1 G 16 DC DG DA DT DA DA DC UMP DT DC DG DT DA SEQRES 2 G 16 DT DA A3P SEQRES 1 Y 21 DT DG DT DA DT DG DC DT DA DT DA DC DG SEQRES 2 Y 21 DA DA DG DT DT DA DT DC SEQRES 1 H 37 DG DG DA DT DA DA DC DT DT DC DG DT DA SEQRES 2 H 37 DT DA DG DC DA DT DA DC DA DT DT DA DT SEQRES 3 H 37 DA DC DG DA DA DG DT DT DA DT DC SEQRES 1 A 343 MET SER ASN LEU LEU THR VAL HIS GLN ASN LEU PRO ALA SEQRES 2 A 343 LEU PRO VAL ASP ALA THR SER ASP GLU VAL ARG LYS ASN SEQRES 3 A 343 LEU MET ASP MET PHE ARG ASP ARG GLN ALA PHE SER GLU SEQRES 4 A 343 HIS THR TRP LYS MET LEU LEU SER VAL CYS ARG SER TRP SEQRES 5 A 343 ALA ALA TRP CYS LYS LEU ASN ASN ARG LYS TRP PHE PRO SEQRES 6 A 343 ALA GLU PRO GLU ASP VAL ARG ASP TYR LEU LEU TYR LEU SEQRES 7 A 343 GLN ALA ARG GLY LEU ALA VAL LYS THR ILE GLN GLN HIS SEQRES 8 A 343 LEU GLY GLN LEU ASN MET LEU HIS ARG ARG SER GLY LEU SEQRES 9 A 343 PRO ARG PRO SER ASP SER ASN ALA VAL SER LEU VAL MET SEQRES 10 A 343 ARG ARG ILE ARG LYS GLU ASN VAL ASP ALA GLY GLU ARG SEQRES 11 A 343 ALA LYS GLN ALA LEU ALA PHE GLU ARG THR ASP PHE ASP SEQRES 12 A 343 GLN VAL ARG SER LEU MET GLU ASN SER ASP ARG CYS GLN SEQRES 13 A 343 ASP ILE ARG ASN LEU ALA PHE LEU GLY ILE ALA TYR ASN SEQRES 14 A 343 THR LEU LEU ARG ILE ALA GLU ILE ALA ARG ILE ARG VAL SEQRES 15 A 343 LYS ASP ILE SER ARG THR ASP GLY GLY ARG MET LEU ILE SEQRES 16 A 343 HIS ILE GLY ARG THR LYS THR LEU VAL SER THR ALA GLY SEQRES 17 A 343 VAL GLU LYS ALA LEU SER LEU GLY VAL THR LYS LEU VAL SEQRES 18 A 343 GLU ARG TRP ILE SER VAL SER GLY VAL ALA ASP ASP PRO SEQRES 19 A 343 ASN ASN TYR LEU PHE CYS ARG VAL ARG LYS ASN GLY VAL SEQRES 20 A 343 ALA ALA PRO SER ALA THR SER GLN LEU SER THR ARG ALA SEQRES 21 A 343 LEU GLU GLY ILE PHE GLU ALA THR HIS ARG LEU ILE TYR SEQRES 22 A 343 GLY ALA LYS ASP ASP SER GLY GLN ARG TYR LEU ALA TRP SEQRES 23 A 343 SER GLY HIS SER ALA ARG VAL GLY ALA ALA ARG ASP MET SEQRES 24 A 343 ALA ARG ALA GLY VAL SER ILE PRO GLU ILE MET GLN ALA SEQRES 25 A 343 GLY GLY TRP THR ASN VAL ASN ILE VAL MET ASN TYR ILE SEQRES 26 A 343 ARG ASN LEU ASP SER GLU THR GLY ALA MET VAL ARG LEU SEQRES 27 A 343 LEU GLU ASP GLY ASP SEQRES 1 B 343 MET SER ASN LEU LEU THR VAL HIS GLN ASN LEU PRO ALA SEQRES 2 B 343 LEU PRO VAL ASP ALA THR SER ASP GLU VAL ARG LYS ASN SEQRES 3 B 343 LEU MET ASP MET PHE ARG ASP ARG GLN ALA PHE SER GLU SEQRES 4 B 343 HIS THR TRP LYS MET LEU LEU SER VAL CYS ARG SER TRP SEQRES 5 B 343 ALA ALA TRP CYS LYS LEU ASN ASN ARG LYS TRP PHE PRO SEQRES 6 B 343 ALA GLU PRO GLU ASP VAL ARG ASP TYR LEU LEU TYR LEU SEQRES 7 B 343 GLN ALA ARG GLY LEU ALA VAL LYS THR ILE GLN GLN HIS SEQRES 8 B 343 LEU GLY GLN LEU ASN MET LEU HIS ARG ARG SER GLY LEU SEQRES 9 B 343 PRO ARG PRO SER ASP SER ASN ALA VAL SER LEU VAL MET SEQRES 10 B 343 ARG ARG ILE ARG LYS GLU ASN VAL ASP ALA GLY GLU ARG SEQRES 11 B 343 ALA LYS GLN ALA LEU ALA PHE GLU ARG THR ASP PHE ASP SEQRES 12 B 343 GLN VAL ARG SER LEU MET GLU ASN SER ASP ARG CYS GLN SEQRES 13 B 343 ASP ILE ARG ASN LEU ALA PHE LEU GLY ILE ALA TYR ASN SEQRES 14 B 343 THR LEU LEU ARG ILE ALA GLU ILE ALA ARG ILE ARG VAL SEQRES 15 B 343 LYS ASP ILE SER ARG THR ASP GLY GLY ARG MET LEU ILE SEQRES 16 B 343 HIS ILE GLY ARG THR LYS THR LEU VAL SER THR ALA GLY SEQRES 17 B 343 VAL GLU LYS ALA LEU SER LEU GLY VAL THR LYS LEU VAL SEQRES 18 B 343 GLU ARG TRP ILE SER VAL SER GLY VAL ALA ASP ASP PRO SEQRES 19 B 343 ASN ASN TYR LEU PHE CYS ARG VAL ARG LYS ASN GLY VAL SEQRES 20 B 343 ALA ALA PRO SER ALA THR SER GLN LEU SER THR ARG ALA SEQRES 21 B 343 LEU GLU GLY ILE PHE GLU ALA THR HIS ARG LEU ILE TYR SEQRES 22 B 343 GLY ALA LYS ASP ASP SER GLY GLN ARG TYR LEU ALA TRP SEQRES 23 B 343 SER GLY HIS SER ALA ARG VAL GLY ALA ALA ARG ASP MET SEQRES 24 B 343 ALA ARG ALA GLY VAL SER ILE PRO GLU ILE MET GLN ALA SEQRES 25 B 343 GLY GLY TRP THR ASN VAL ASN ILE VAL MET ASN TYR ILE SEQRES 26 B 343 ARG ASN LEU ASP SER GLU THR GLY ALA MET VAL ARG LEU SEQRES 27 B 343 LEU GLU ASP GLY ASP SEQRES 1 E 343 MET SER ASN LEU LEU THR VAL HIS GLN ASN LEU PRO ALA SEQRES 2 E 343 LEU PRO VAL ASP ALA THR SER ASP GLU VAL ARG LYS ASN SEQRES 3 E 343 LEU MET ASP MET PHE ARG ASP ARG GLN ALA PHE SER GLU SEQRES 4 E 343 HIS THR TRP LYS MET LEU LEU SER VAL CYS ARG SER TRP SEQRES 5 E 343 ALA ALA TRP CYS LYS LEU ASN ASN ARG LYS TRP PHE PRO SEQRES 6 E 343 ALA GLU PRO GLU ASP VAL ARG ASP TYR LEU LEU TYR LEU SEQRES 7 E 343 GLN ALA ARG GLY LEU ALA VAL LYS THR ILE GLN GLN HIS SEQRES 8 E 343 LEU GLY GLN LEU ASN MET LEU HIS ARG ARG SER GLY LEU SEQRES 9 E 343 PRO ARG PRO SER ASP SER ASN ALA VAL SER LEU VAL MET SEQRES 10 E 343 ARG ARG ILE ARG LYS GLU ASN VAL ASP ALA GLY GLU ARG SEQRES 11 E 343 ALA LYS GLN ALA LEU ALA PHE GLU ARG THR ASP PHE ASP SEQRES 12 E 343 GLN VAL ARG SER LEU MET GLU ASN SER ASP ARG CYS GLN SEQRES 13 E 343 ASP ILE ARG ASN LEU ALA PHE LEU GLY ILE ALA TYR ASN SEQRES 14 E 343 THR LEU LEU ARG ILE ALA GLU ILE ALA ARG ILE ARG VAL SEQRES 15 E 343 LYS ASP ILE SER ARG THR ASP GLY GLY ARG MET LEU ILE SEQRES 16 E 343 HIS ILE GLY ARG THR LYS THR LEU VAL SER THR ALA GLY SEQRES 17 E 343 VAL GLU LYS ALA LEU SER LEU GLY VAL THR LYS LEU VAL SEQRES 18 E 343 GLU ARG TRP ILE SER VAL SER GLY VAL ALA ASP ASP PRO SEQRES 19 E 343 ASN ASN TYR LEU PHE CYS ARG VAL ARG LYS ASN GLY VAL SEQRES 20 E 343 ALA ALA PRO SER ALA THR SER GLN LEU SER THR ARG ALA SEQRES 21 E 343 LEU GLU GLY ILE PHE GLU ALA THR HIS ARG LEU ILE TYR SEQRES 22 E 343 GLY ALA LYS ASP ASP SER GLY GLN ARG TYR LEU ALA TRP SEQRES 23 E 343 SER GLY HIS SER ALA ARG VAL GLY ALA ALA ARG ASP MET SEQRES 24 E 343 ALA ARG ALA GLY VAL SER ILE PRO GLU ILE MET GLN ALA SEQRES 25 E 343 GLY GLY TRP THR ASN VAL ASN ILE VAL MET ASN TYR ILE SEQRES 26 E 343 ARG ASN LEU ASP SER GLU THR GLY ALA MET VAL ARG LEU SEQRES 27 E 343 LEU GLU ASP GLY ASP SEQRES 1 F 343 MET SER ASN LEU LEU THR VAL HIS GLN ASN LEU PRO ALA SEQRES 2 F 343 LEU PRO VAL ASP ALA THR SER ASP GLU VAL ARG LYS ASN SEQRES 3 F 343 LEU MET ASP MET PHE ARG ASP ARG GLN ALA PHE SER GLU SEQRES 4 F 343 HIS THR TRP LYS MET LEU LEU SER VAL CYS ARG SER TRP SEQRES 5 F 343 ALA ALA TRP CYS LYS LEU ASN ASN ARG LYS TRP PHE PRO SEQRES 6 F 343 ALA GLU PRO GLU ASP VAL ARG ASP TYR LEU LEU TYR LEU SEQRES 7 F 343 GLN ALA ARG GLY LEU ALA VAL LYS THR ILE GLN GLN HIS SEQRES 8 F 343 LEU GLY GLN LEU ASN MET LEU HIS ARG ARG SER GLY LEU SEQRES 9 F 343 PRO ARG PRO SER ASP SER ASN ALA VAL SER LEU VAL MET SEQRES 10 F 343 ARG ARG ILE ARG LYS GLU ASN VAL ASP ALA GLY GLU ARG SEQRES 11 F 343 ALA LYS GLN ALA LEU ALA PHE GLU ARG THR ASP PHE ASP SEQRES 12 F 343 GLN VAL ARG SER LEU MET GLU ASN SER ASP ARG CYS GLN SEQRES 13 F 343 ASP ILE ARG ASN LEU ALA PHE LEU GLY ILE ALA TYR ASN SEQRES 14 F 343 THR LEU LEU ARG ILE ALA GLU ILE ALA ARG ILE ARG VAL SEQRES 15 F 343 LYS ASP ILE SER ARG THR ASP GLY GLY ARG MET LEU ILE SEQRES 16 F 343 HIS ILE GLY ARG THR LYS THR LEU VAL SER THR ALA GLY SEQRES 17 F 343 VAL GLU LYS ALA LEU SER LEU GLY VAL THR LYS LEU VAL SEQRES 18 F 343 GLU ARG TRP ILE SER VAL SER GLY VAL ALA ASP ASP PRO SEQRES 19 F 343 ASN ASN TYR LEU PHE CYS ARG VAL ARG LYS ASN GLY VAL SEQRES 20 F 343 ALA ALA PRO SER ALA THR SER GLN LEU SER THR ARG ALA SEQRES 21 F 343 LEU GLU GLY ILE PHE GLU ALA THR HIS ARG LEU ILE TYR SEQRES 22 F 343 GLY ALA LYS ASP ASP SER GLY GLN ARG TYR LEU ALA TRP SEQRES 23 F 343 SER GLY HIS SER ALA ARG VAL GLY ALA ALA ARG ASP MET SEQRES 24 F 343 ALA ARG ALA GLY VAL SER ILE PRO GLU ILE MET GLN ALA SEQRES 25 F 343 GLY GLY TRP THR ASN VAL ASN ILE VAL MET ASN TYR ILE SEQRES 26 F 343 ARG ASN LEU ASP SER GLU THR GLY ALA MET VAL ARG LEU SEQRES 27 F 343 LEU GLU ASP GLY ASP
MODRES 1OUQ UMP C 107 U 2'-DEOXYURIDINE 5'-MONOPHOSPHATE MODRES 1OUQ A3P C 115 A ADENOSINE-3'-5'-DIPHOSPHATE MODRES 1OUQ UMP G 107 U 2'-DEOXYURIDINE 5'-MONOPHOSPHATE MODRES 1OUQ A3P G 115 A ADENOSINE-3'-5'-DIPHOSPHATE
HET UMP C 107 19 HET A3P C 115 24 HET UMP G 107 19 HET A3P G 115 24 HET MG A 344 1 HET MG A 345 1 HET MG A 346 1 HET MG A 347 1 HET MG H 307 1 HET MG F 344 1 HET MG D 310 1 HET IOD C1107 1 HET IOD F2107 1
HETNAM UMP 2'-DEOXYURIDINE 5'-MONOPHOSPHATE HETNAM A3P ADENOSINE-3'-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM IOD IODIDE ION
HETSYN UMP DUMP
FORMUL 1 UMP 2(C9 H13 N2 O8 P) FORMUL 1 A3P 2(C10 H15 N5 O10 P2) FORMUL 11 MG 7(MG 2+) FORMUL 18 IOD 2(I 1-) FORMUL 20 HOH *3(H2 O)
HELIX 1 1 GLU A 22 ASP A 33 1 12 HELIX 2 2 ARG A 34 PHE A 37 5 4 HELIX 3 3 SER A 38 ASN A 60 1 23 HELIX 4 4 GLU A 67 GLY A 82 1 16 HELIX 5 5 ALA A 84 ARG A 101 1 18 HELIX 6 6 SER A 110 ALA A 127 1 18 HELIX 7 7 GLU A 138 GLU A 150 1 13 HELIX 8 8 ARG A 154 LEU A 171 1 18 HELIX 9 9 ARG A 173 ALA A 178 1 6 HELIX 10 10 ARG A 179 ILE A 180 5 2 HELIX 11 11 ARG A 181 LYS A 183 5 3 HELIX 12 12 SER A 214 GLY A 229 1 16 HELIX 13 13 SER A 257 GLY A 274 1 18 HELIX 14 14 HIS A 289 ALA A 302 1 14 HELIX 15 15 SER A 305 GLY A 314 1 10 HELIX 16 16 VAL A 318 ILE A 325 1 8 HELIX 17 17 LEU A 328 THR A 332 5 5 HELIX 18 18 GLY A 333 GLU A 340 1 8 HELIX 19 19 GLU B 22 ASP B 33 1 12 HELIX 20 20 ARG B 34 PHE B 37 5 4 HELIX 21 21 SER B 38 LEU B 58 1 21 HELIX 22 22 GLU B 67 ARG B 81 1 15 HELIX 23 23 ALA B 84 SER B 102 1 19 HELIX 24 24 ARG B 106 ASP B 109 5 4 HELIX 25 25 SER B 110 GLY B 128 1 19 HELIX 26 26 GLU B 138 SER B 147 1 10 HELIX 27 27 ARG B 154 LEU B 171 1 18 HELIX 28 28 ARG B 173 ILE B 180 1 8 HELIX 29 29 ARG B 181 ILE B 185 5 5 HELIX 30 30 SER B 214 GLY B 229 1 16 HELIX 31 31 SER B 257 GLY B 274 1 18 HELIX 32 32 HIS B 289 GLY B 303 1 15 HELIX 33 33 SER B 305 ALA B 312 1 8 HELIX 34 34 ASN B 317 MET B 322 1 6 HELIX 35 35 ASN B 323 ILE B 325 5 3 HELIX 36 36 ALA B 334 ASP B 341 1 8 HELIX 37 37 GLU E 22 ASP E 33 1 12 HELIX 38 38 ARG E 34 PHE E 37 5 4 HELIX 39 39 SER E 38 LYS E 57 1 20 HELIX 40 40 GLU E 67 ARG E 81 1 15 HELIX 41 41 ALA E 84 ARG E 101 1 18 HELIX 42 42 SER E 110 ALA E 127 1 18 HELIX 43 43 GLU E 138 LEU E 148 1 11 HELIX 44 44 ARG E 154 LEU E 171 1 18 HELIX 45 45 ARG E 173 ILE E 180 1 8 HELIX 46 46 ARG E 181 ILE E 185 5 5 HELIX 47 47 LEU E 215 SER E 228 1 14 HELIX 48 48 SER E 257 GLY E 274 1 18 HELIX 49 49 HIS E 289 GLY E 303 1 15 HELIX 50 50 SER E 305 GLY E 314 1 10 HELIX 51 51 VAL E 318 ARG E 326 1 9 HELIX 52 52 ASP E 329 THR E 332 5 4 HELIX 53 53 GLY E 333 GLU E 340 1 8 HELIX 54 54 SER F 20 ARG F 32 1 13 HELIX 55 55 ASP F 33 PHE F 37 5 5 HELIX 56 56 SER F 38 LEU F 58 1 21 HELIX 57 57 GLU F 67 ARG F 81 1 15 HELIX 58 58 ALA F 84 GLY F 103 1 20 HELIX 59 59 ARG F 106 ASP F 109 5 4 HELIX 60 60 SER F 110 ALA F 127 1 18 HELIX 61 61 GLU F 138 GLU F 150 1 13 HELIX 62 62 ARG F 154 LEU F 171 1 18 HELIX 63 63 ARG F 173 ARG F 179 1 7 HELIX 64 64 ARG F 181 LYS F 183 5 3 HELIX 65 65 SER F 214 GLY F 229 1 16 HELIX 66 66 SER F 257 TYR F 273 1 17 HELIX 67 67 HIS F 289 ALA F 302 1 14 HELIX 68 68 SER F 305 GLY F 314 1 10 HELIX 69 69 ASN F 317 TYR F 324 1 8 HELIX 70 70 ALA F 334 GLU F 340 1 7
SHEET 1 A 3 ILE A 185 SER A 186 0 SHEET 2 A 3 LEU A 194 HIS A 196 -1 O LEU A 194 N SER A 186 SHEET 3 A 3 GLU A 210 ALA A 212 -1 O LYS A 211 N ILE A 195 SHEET 1 B 2 ILE B 197 ARG B 199 0 SHEET 2 B 2 VAL B 204 VAL B 209 -1 O VAL B 209 N ILE B 197 SHEET 1 C 2 ARG E 187 THR E 188 0 SHEET 2 C 2 ARG E 192 MET E 193 -1 O ARG E 192 N THR E 188 SHEET 1 D 2 ILE E 195 HIS E 196 0 SHEET 2 D 2 GLU E 210 LYS E 211 -1 O LYS E 211 N ILE E 195 SHEET 1 E 3 ILE F 185 ARG F 187 0 SHEET 2 E 3 MET F 193 ARG F 199 -1 O LEU F 194 N SER F 186 SHEET 3 E 3 VAL F 204 LYS F 211 -1 O LYS F 211 N ILE F 195
LINK O3' DC C 106 P UMP C 107 1555 1555 1.61 LINK O3' UMP C 107 P DT C 108 1555 1555 1.60 LINK O3' DA C 114 P2 A3P C 115 1555 1555 1.59 LINK P1 A3P C 115 OH TYR B 324 1555 1555 1.60 LINK O3' DC G 106 P UMP G 107 1555 1555 1.63 LINK O3' UMP G 107 P DT G 108 1555 1555 1.61 LINK O3' DA G 114 P2 A3P G 115 1555 1555 1.60 LINK P1 A3P G 115 OH TYR F 324 1555 1555 1.75 LINK MG MG A 344 O4 DT D 111 1555 1555 3.15 LINK MG MG D 310 N7 DA D 105 1555 1555 3.01 LINK MG MG F 344 NE2 HIS F 91 1555 1555 2.27
CISPEP 1 PHE A 64 PRO A 65 0 -0.60 CISPEP 2 PHE B 64 PRO B 65 0 -0.97 CISPEP 3 PHE E 64 PRO E 65 0 -0.05 CISPEP 4 PHE F 64 PRO F 65 0 -0.53
SITE 1 AC1 2 LYS A 43 DT D 111 SITE 1 AC2 1 HIS A 269 SITE 1 AC3 1 GLU A 138 SITE 1 AC4 1 DC D 106 SITE 1 AC5 3 THR F 87 HIS F 91 DA G 112 SITE 1 AC6 1 DA D 105
CRYST1 109.500 165.600 193.700 90.00 90.00 90.00 P 21 21 21 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009132 0.000000 0.000000 0.00000
SCALE2 0.000000 0.006039 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005163 0.00000