10 20 30 40 50 60 70 80 1O6Z - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 22-OCT-02 1O6Z
TITLE 1.95 A RESOLUTION STRUCTURE OF (R207S,R292S) MUTANT OF TITLE 2 MALATE DEHYDROGENASE FROM THE HALOPHILIC ARCHAEON TITLE 3 HALOARCULA MARISMORTUI (HOLO FORM)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALATE DEHYDROGENASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: MDH; COMPND 5 EC: 1.1.1.37; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: COMPLEXED WITH NADH
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALOARCULA MARISMORTUI; SOURCE 3 ORGANISM_TAXID: 2238; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: HMS174(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET11A
KEYWDS HALOPHILIC, ION-BINDING, PROTEIN-SOLVENT INTERACTION, KEYWDS 2 MALATE DEHYDROGENASE, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR A.IRIMIA,C.EBEL,D.MADERN,S.B.RICHARD,L.W.COSENZA,G.ZACCAI, AUTHOR 2 F.M.D.VELLIEUX
REVDAT 2 24-FEB-09 1O6Z 1 VERSN REVDAT 1 06-FEB-03 1O6Z 0
JRNL AUTH A.IRIMIA,C.EBEL,D.MADERN,S.B.RICHARD,L.W.COSENZA, JRNL AUTH 2 G.ZACCAI,F.M.D.VELLIEUX JRNL TITL THE OLIGOMERIC STATES OF HALOARCULA MARISMORTUI JRNL TITL 2 MALATE DEHYDROGENASE ARE MODULATED BY SOLVENT JRNL TITL 3 COMPONENTS AS SHOWN BY CRYSTALLOGRAPHIC AND JRNL TITL 4 BIOCHEMICAL STUDIES JRNL REF J.MOL.BIOL. V. 326 859 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 12581646 JRNL DOI 10.1016/S0022-2836(02)01450-X
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.MADERN,C.EBEL,M.MEVARECH,S.B.RICHARD,C.PFISTER, REMARK 1 AUTH 2 G.ZACCAI REMARK 1 TITL INSIGHTS INTO THE MOLECULAR RELATIONSHIPS BETWEEN REMARK 1 TITL 2 MALATE AND LACTATE DEHYDROGENASES: STRUCTURAL AND REMARK 1 TITL 3 BIOCHEMICAL PROPERTIES OF MONOMERIC AND DIMERIC REMARK 1 TITL 4 INTERMEDIATES OF A MUTANT OF TETRAMERIC REMARK 1 TITL 5 L-[LDH-LIKE] MALATE DEHYDROGENASE FROM THE REMARK 1 TITL 6 HALOPHILIC ARCHAEON HALOARCULA MARISMORTUI REMARK 1 REF BIOCHEMISTRY V. 39 1001 2000 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 10653644 REMARK 1 DOI 10.1021/BI9910023 REMARK 1 REFERENCE 2 REMARK 1 AUTH S.B.RICHARD,D.MADERN,E.GARCIN,G.ZACCAI REMARK 1 TITL HALOPHILIC ADAPTATION: NOVEL SOLVENT PROTEIN REMARK 1 TITL 2 INTERACTIONS OBSERVED IN THE 2.9 AND 2.6 A REMARK 1 TITL 3 RESOLUTION STRUCTURES OF THE WILD TYPE AND A REMARK 1 TITL 4 MUTANT OF MALATE DEHYDROGENASE FROM HALOARCULA REMARK 1 TITL 5 MARISMORTUI REMARK 1 REF BIOCHEMISTRY V. 39 992 2000 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 10653643 REMARK 1 DOI 10.1021/BI991001A REMARK 1 REFERENCE 3 REMARK 1 AUTH O.DYM,M.MEVARECH,J.L.SUSSMAN REMARK 1 TITL STRUCTURAL FEATURES THAT STABILIZE HALOPHILIC REMARK 1 TITL 2 MALATE DEHYDROGENASE FROM AN ARCHAEBACTERIUM REMARK 1 REF SCIENCE V. 267 1344 1995 REMARK 1 REFN ISSN 0036-8075 REMARK 1 PMID 17812611 REMARK 1 DOI 10.1126/SCIENCE.267.5202.1344 REMARK 1 REFERENCE 4 REMARK 1 AUTH D.MADERN,C.PFISTER,G.ZACCAI REMARK 1 TITL MUTATION AT A SINGLE ACIDIC AMINO ACID ENHANCES REMARK 1 TITL 2 THE HALOPHILIC BEHAVIOUR OF MALATE DEHYDROGENASE REMARK 1 TITL 3 FROM HALOARCULA MARISMORTUI IN PHYSIOLOGICAL SALTS REMARK 1 REF EUR.J.BIOCHEM. V. 230 1088 1995 REMARK 1 REFN ISSN 0014-2956 REMARK 1 PMID 7601139 REMARK 1 DOI 10.1111/J.1432-1033.1995.TB20659.X REMARK 1 REFERENCE 5 REMARK 1 AUTH F.CENDRIN,J.CHROBOCZEK,G.ZACCAI,H.EISENBERG, REMARK 1 AUTH 2 M.MEVARECH REMARK 1 TITL CLONING, SEQUENCING, AND EXPRESSION IN ESCHERICHIA REMARK 1 TITL 2 COLI OF THE GENE CODING FOR MALATE DEHYDROGENASE REMARK 1 TITL 3 OF THE EXTREMELY HALOPHILIC ARCHAEBACTERIUM REMARK 1 TITL 4 HALOARCULA MARISMORTUI REMARK 1 REF BIOCHEMISTRY V. 32 4308 1993 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 8476859 REMARK 1 DOI 10.1021/BI00067A020
REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 12.0 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 78.8 REMARK 3 NUMBER OF REFLECTIONS : 94883 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.19365 REMARK 3 R VALUE (WORKING SET) : 0.18991 REMARK 3 FREE R VALUE : 0.26328 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 FREE R VALUE TEST SET COUNT : 5049 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9150 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 184 REMARK 3 SOLVENT ATOMS : 677 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.478 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.63 REMARK 3 B22 (A**2) : 0.36 REMARK 3 B33 (A**2) : -1.91 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.75 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.260 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.170 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.167 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.089 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. THE REGION 100-107 OF B AND D CHAIN IS REMARK 3 DISORDERED. THE RESIDUES 101-106 IN THESE DISORDERED REGIONS REMARK 3 COULD NOT BE MODELLED AND ARE OMITTED FROM THE MODEL.
REMARK 4 REMARK 4 1O6Z COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-OCT-02. REMARK 100 THE PDBE ID CODE IS EBI-11557.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-00 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.60 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : GE(220) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : BIOMOL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 100475 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 42.260 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 77.8 REMARK 200 DATA REDUNDANCY : 3.340 REMARK 200 R MERGE (I) : 0.06420 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.8600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 43.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.12 REMARK 200 R MERGE FOR SHELL (I) : 0.14270 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.030 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1GT2 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M NACL, 25 MM TRIS REMARK 280 PH 7.6, 2.5 MM NADH, 50% MPD
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 63.32000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.21000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 63.32000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 57.21000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 HOH C2056 LIES ON A SPECIAL POSITION.
REMARK 400 REMARK 400 COMPOUND REMARK 400 REMARK 400 ENGINEERED MUTATION ARG 188 SER AND ARG 267 SER IN REMARK 400 CHAINS A, B, C AND D
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO B 101 REMARK 465 ARG B 102 REMARK 465 GLN B 103 REMARK 465 PRO B 105 REMARK 465 GLY B 106 REMARK 465 PRO D 101 REMARK 465 ARG D 102 REMARK 465 GLN D 103 REMARK 465 PRO D 105 REMARK 465 GLY D 106
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN A 103 - N PRO A 105 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 38 CZ TYR A 38 OH 0.121 REMARK 500 TYR A 72 CG TYR A 72 CD1 0.092 REMARK 500 VAL A 93 CB VAL A 93 CG2 0.139 REMARK 500 PHE A 163 CD2 PHE A 163 CE2 0.124 REMARK 500 PHE A 163 CE1 PHE A 163 CZ 0.164 REMARK 500 PHE A 163 CG PHE A 163 CD2 0.093 REMARK 500 PHE A 172 CE2 PHE A 172 CZ 0.115 REMARK 500 GLU A 178 CD GLU A 178 OE2 -0.089 REMARK 500 PHE A 180 CB PHE A 180 CG -0.110 REMARK 500 PHE A 180 CE2 PHE A 180 CZ -0.122 REMARK 500 VAL A 184 CB VAL A 184 CG2 0.134 REMARK 500 VAL A 202 CB VAL A 202 CG1 -0.134 REMARK 500 GLU A 247 CD GLU A 247 OE1 0.098 REMARK 500 HIS A 256 C HIS A 256 O 0.125 REMARK 500 GLU A 267 CD GLU A 267 OE1 -0.067 REMARK 500 VAL A 268 CB VAL A 268 CG1 0.128 REMARK 500 TYR A 310 CD2 TYR A 310 CE2 0.093 REMARK 500 GLU A 311 CD GLU A 311 OE1 0.075 REMARK 500 GLU A 320 CD GLU A 320 OE1 0.083 REMARK 500 GLU A 320 CD GLU A 320 OE2 0.078 REMARK 500 TYR B 38 CD1 TYR B 38 CE1 -0.100 REMARK 500 VAL B 50 CA VAL B 50 CB -0.131 REMARK 500 THR B 138 CB THR B 138 CG2 0.212 REMARK 500 SER B 156 CB SER B 156 OG 0.085 REMARK 500 GLU B 158 CD GLU B 158 OE1 0.078 REMARK 500 ALA B 170 CA ALA B 170 CB -0.169 REMARK 500 TYR B 174 CD2 TYR B 174 CE2 -0.103 REMARK 500 TYR B 174 CE1 TYR B 174 CZ -0.082 REMARK 500 TRP B 248 CZ3 TRP B 248 CH2 -0.097 REMARK 500 GLY B 249 C GLY B 249 O 0.131 REMARK 500 VAL B 254 CB VAL B 254 CG2 -0.198 REMARK 500 GLU B 267 CD GLU B 267 OE2 0.079 REMARK 500 SER B 272 CB SER B 272 OG 0.087 REMARK 500 VAL B 291 CB VAL B 291 CG1 0.140 REMARK 500 GLU B 320 CD GLU B 320 OE2 0.067 REMARK 500 VAL C 24 CB VAL C 24 CG1 0.135 REMARK 500 TYR C 38 CD2 TYR C 38 CE2 0.117 REMARK 500 ILE C 40 C ILE C 40 O -0.118 REMARK 500 LYS C 55 CB LYS C 55 CG 0.180 REMARK 500 HIS C 68 C HIS C 68 O 0.115 REMARK 500 TYR C 72 CZ TYR C 72 OH 0.151 REMARK 500 GLN C 80 C GLN C 80 O -0.117 REMARK 500 GLU C 86 CG GLU C 86 CD 0.091 REMARK 500 ASP C 111 CB ASP C 111 CG 0.156 REMARK 500 TYR C 150 CE2 TYR C 150 CZ -0.081 REMARK 500 GLU C 151 CD GLU C 151 OE1 0.069 REMARK 500 ALA C 152 CA ALA C 152 CB 0.165 REMARK 500 TYR C 174 CD2 TYR C 174 CE2 -0.091 REMARK 500 GLU C 179 CD GLU C 179 OE2 0.071 REMARK 500 PHE C 180 CG PHE C 180 CD1 0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 44 CB - CG - OD2 ANGL. DEV. = 8.2 DEGREES REMARK 500 ASP A 53 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 54C CB - CG - OD2 ANGL. DEV. = 7.9 DEGREES REMARK 500 ASP A 65 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG A 77 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP A 115 CB - CG - OD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP A 122 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 154 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG A 171 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP A 211 CB - CG - OD2 ANGL. DEV. = 7.8 DEGREES REMARK 500 ASP A 264 CB - CG - OD2 ANGL. DEV. = 7.6 DEGREES REMARK 500 GLU A 276 OE1 - CD - OE2 ANGL. DEV. = -7.3 DEGREES REMARK 500 GLU A 304 OE1 - CD - OE2 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASP A 306 CB - CG - OD2 ANGL. DEV. = 10.4 DEGREES REMARK 500 ASP A 309 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 313 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 54C CB - CG - OD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASP B 57 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP B 65 CB - CG - OD2 ANGL. DEV. = 7.6 DEGREES REMARK 500 ASP B 92 CB - CG - OD2 ANGL. DEV. = 10.5 DEGREES REMARK 500 ASP B 111 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP B 115 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG B 157 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP B 168 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG B 173 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP B 211 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP B 223 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG B 252 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ASP B 306 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP B 317 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG C 43 NE - CZ - NH2 ANGL. DEV. = 3.9 DEGREES REMARK 500 ASP C 53 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 ASP C 58 CB - CG - OD2 ANGL. DEV. = 9.3 DEGREES REMARK 500 ASP C 65 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP C 87 CB - CG - OD2 ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG C 109 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ASP C 111 CB - CG - OD2 ANGL. DEV. = 7.4 DEGREES REMARK 500 ASP C 122 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP C 168 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP C 181 CB - CG - OD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP C 181 CB - CG - OD2 ANGL. DEV. = 10.3 DEGREES REMARK 500 ASP C 197 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP C 211 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP C 223 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP C 238 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ALA C 245 CB - CA - C ANGL. DEV. = -9.9 DEGREES REMARK 500 ARG C 252 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ASP C 264 CB - CG - OD1 ANGL. DEV. = 7.8 DEGREES REMARK 500 ASP C 284 CB - CG - OD1 ANGL. DEV. = 7.4 DEGREES REMARK 500 ASP C 306 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 64 ANGLE DEVIATIONS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 139 128.36 -39.50 REMARK 500 ALA A 198 49.37 -81.81 REMARK 500 GLU A 247 -72.79 -139.41 REMARK 500 ASP B 44 43.78 75.87 REMARK 500 PRO B 54B -34.51 -37.08 REMARK 500 THR B 76 130.99 -38.69 REMARK 500 ALA B 198 52.19 -93.64 REMARK 500 GLU B 247 -69.20 -125.09 REMARK 500 ALA C 198 49.13 -91.64 REMARK 500 VAL C 202 73.61 -101.34 REMARK 500 ALA C 245 132.85 179.17 REMARK 500 GLU C 247 -71.04 -129.32 REMARK 500 ASP D 54C -38.87 -35.75 REMARK 500 GLU D 247 -60.67 -132.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG C 166 -10.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LEU C 314 24.8 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL D1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL D1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B3002 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD C3003 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD D3004
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1D3A RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE WILD TYPE REMARK 900 HALOPHILIC MALATE DEHYDROGENASE IN THE APO REMARK 900 FORM REMARK 900 RELATED ID: 1GT2 RELATED DB: PDB REMARK 900 R207S,R292S MUTANT OF MALATE DEHYDROGENASE REMARK 900 FROM THE HALOPHILIC ARCHAEON HALOARCULA REMARK 900 MARISMORTUI (HOLO FORM) REMARK 900 RELATED ID: 1HLP RELATED DB: PDB REMARK 900 MALATE DEHYDROGENASE (HALOPHILIC) COMPLEXED WITH REMARK 900 NICOTINAMIDE ADENINE DINUCLEOTIDE (NAD) REMARK 900 RELATED ID: 2HLP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE E267R MUTANT OF A REMARK 900 HALOPHILIC MALATE DEHYDROGENASE IN THE APO FORM
DBREF 1O6Z A 22 81 UNP Q07841 MDH_HALMA 2 64 DBREF 1O6Z A 84 103 UNP Q07841 MDH_HALMA 65 84 DBREF 1O6Z A 105 212 UNP Q07841 MDH_HALMA 85 194 DBREF 1O6Z A 219 280 UNP Q07841 MDH_HALMA 195 256 DBREF 1O6Z A 282 299 UNP Q07841 MDH_HALMA 257 274 DBREF 1O6Z A 301 330 UNP Q07841 MDH_HALMA 275 304 DBREF 1O6Z B 22 81 UNP Q07841 MDH_HALMA 2 64 DBREF 1O6Z B 84 103 UNP Q07841 MDH_HALMA 65 84 DBREF 1O6Z B 105 212 UNP Q07841 MDH_HALMA 85 194 DBREF 1O6Z B 219 280 UNP Q07841 MDH_HALMA 195 256 DBREF 1O6Z B 282 299 UNP Q07841 MDH_HALMA 257 274 DBREF 1O6Z B 301 330 UNP Q07841 MDH_HALMA 275 304 DBREF 1O6Z C 22 81 UNP Q07841 MDH_HALMA 2 64 DBREF 1O6Z C 84 103 UNP Q07841 MDH_HALMA 65 84 DBREF 1O6Z C 105 212 UNP Q07841 MDH_HALMA 85 194 DBREF 1O6Z C 219 280 UNP Q07841 MDH_HALMA 195 256 DBREF 1O6Z C 282 299 UNP Q07841 MDH_HALMA 257 274 DBREF 1O6Z C 301 330 UNP Q07841 MDH_HALMA 275 304 DBREF 1O6Z D 22 81 UNP Q07841 MDH_HALMA 2 64 DBREF 1O6Z D 84 103 UNP Q07841 MDH_HALMA 65 84 DBREF 1O6Z D 105 212 UNP Q07841 MDH_HALMA 85 194 DBREF 1O6Z D 219 280 UNP Q07841 MDH_HALMA 195 256 DBREF 1O6Z D 282 299 UNP Q07841 MDH_HALMA 257 274 DBREF 1O6Z D 301 330 UNP Q07841 MDH_HALMA 275 304
SEQADV 1O6Z SER A 207 UNP Q07841 ARG 188 ENGINEERED MUTATION SEQADV 1O6Z SER A 292 UNP Q07841 ARG 267 ENGINEERED MUTATION SEQADV 1O6Z SER B 207 UNP Q07841 ARG 188 ENGINEERED MUTATION SEQADV 1O6Z SER B 292 UNP Q07841 ARG 267 ENGINEERED MUTATION SEQADV 1O6Z SER C 207 UNP Q07841 ARG 188 ENGINEERED MUTATION SEQADV 1O6Z SER C 292 UNP Q07841 ARG 267 ENGINEERED MUTATION SEQADV 1O6Z SER D 207 UNP Q07841 ARG 188 ENGINEERED MUTATION SEQADV 1O6Z SER D 292 UNP Q07841 ARG 267 ENGINEERED MUTATION
SEQRES 1 A 303 THR LYS VAL SER VAL VAL GLY ALA ALA GLY THR VAL GLY SEQRES 2 A 303 ALA ALA ALA GLY TYR ASN ILE ALA LEU ARG ASP ILE ALA SEQRES 3 A 303 ASP GLU VAL VAL PHE VAL ASP ILE PRO ASP LYS GLU ASP SEQRES 4 A 303 ASP THR VAL GLY GLN ALA ALA ASP THR ASN HIS GLY ILE SEQRES 5 A 303 ALA TYR ASP SER ASN THR ARG VAL ARG GLN GLY GLY TYR SEQRES 6 A 303 GLU ASP THR ALA GLY SER ASP VAL VAL VAL ILE THR ALA SEQRES 7 A 303 GLY ILE PRO ARG GLN PRO GLY GLN THR ARG ILE ASP LEU SEQRES 8 A 303 ALA GLY ASP ASN ALA PRO ILE MET GLU ASP ILE GLN SER SEQRES 9 A 303 SER LEU ASP GLU HIS ASN ASP ASP TYR ILE SER LEU THR SEQRES 10 A 303 THR SER ASN PRO VAL ASP LEU LEU ASN ARG HIS LEU TYR SEQRES 11 A 303 GLU ALA GLY ASP ARG SER ARG GLU GLN VAL ILE GLY PHE SEQRES 12 A 303 GLY GLY ARG LEU ASP SER ALA ARG PHE ARG TYR VAL LEU SEQRES 13 A 303 SER GLU GLU PHE ASP ALA PRO VAL GLN ASN VAL GLU GLY SEQRES 14 A 303 THR ILE LEU GLY GLU HIS GLY ASP ALA GLN VAL PRO VAL SEQRES 15 A 303 PHE SER LYS VAL SER VAL ASP GLY THR ASP PRO GLU PHE SEQRES 16 A 303 SER GLY ASP GLU LYS GLU GLN LEU LEU GLY ASP LEU GLN SEQRES 17 A 303 GLU SER ALA MET ASP VAL ILE GLU ARG LYS GLY ALA THR SEQRES 18 A 303 GLU TRP GLY PRO ALA ARG GLY VAL ALA HIS MET VAL GLU SEQRES 19 A 303 ALA ILE LEU HIS ASP THR GLY GLU VAL LEU PRO ALA SER SEQRES 20 A 303 VAL LYS LEU GLU GLY GLU PHE GLY HIS GLU ASP THR ALA SEQRES 21 A 303 PHE GLY VAL PRO VAL SER LEU GLY SER ASN GLY VAL GLU SEQRES 22 A 303 GLU ILE VAL GLU TRP ASP LEU ASP ASP TYR GLU GLN ASP SEQRES 23 A 303 LEU MET ALA ASP ALA ALA GLU LYS LEU SER ASP GLN TYR SEQRES 24 A 303 ASP LYS ILE SER SEQRES 1 B 303 THR LYS VAL SER VAL VAL GLY ALA ALA GLY THR VAL GLY SEQRES 2 B 303 ALA ALA ALA GLY TYR ASN ILE ALA LEU ARG ASP ILE ALA SEQRES 3 B 303 ASP GLU VAL VAL PHE VAL ASP ILE PRO ASP LYS GLU ASP SEQRES 4 B 303 ASP THR VAL GLY GLN ALA ALA ASP THR ASN HIS GLY ILE SEQRES 5 B 303 ALA TYR ASP SER ASN THR ARG VAL ARG GLN GLY GLY TYR SEQRES 6 B 303 GLU ASP THR ALA GLY SER ASP VAL VAL VAL ILE THR ALA SEQRES 7 B 303 GLY ILE PRO ARG GLN PRO GLY GLN THR ARG ILE ASP LEU SEQRES 8 B 303 ALA GLY ASP ASN ALA PRO ILE MET GLU ASP ILE GLN SER SEQRES 9 B 303 SER LEU ASP GLU HIS ASN ASP ASP TYR ILE SER LEU THR SEQRES 10 B 303 THR SER ASN PRO VAL ASP LEU LEU ASN ARG HIS LEU TYR SEQRES 11 B 303 GLU ALA GLY ASP ARG SER ARG GLU GLN VAL ILE GLY PHE SEQRES 12 B 303 GLY GLY ARG LEU ASP SER ALA ARG PHE ARG TYR VAL LEU SEQRES 13 B 303 SER GLU GLU PHE ASP ALA PRO VAL GLN ASN VAL GLU GLY SEQRES 14 B 303 THR ILE LEU GLY GLU HIS GLY ASP ALA GLN VAL PRO VAL SEQRES 15 B 303 PHE SER LYS VAL SER VAL ASP GLY THR ASP PRO GLU PHE SEQRES 16 B 303 SER GLY ASP GLU LYS GLU GLN LEU LEU GLY ASP LEU GLN SEQRES 17 B 303 GLU SER ALA MET ASP VAL ILE GLU ARG LYS GLY ALA THR SEQRES 18 B 303 GLU TRP GLY PRO ALA ARG GLY VAL ALA HIS MET VAL GLU SEQRES 19 B 303 ALA ILE LEU HIS ASP THR GLY GLU VAL LEU PRO ALA SER SEQRES 20 B 303 VAL LYS LEU GLU GLY GLU PHE GLY HIS GLU ASP THR ALA SEQRES 21 B 303 PHE GLY VAL PRO VAL SER LEU GLY SER ASN GLY VAL GLU SEQRES 22 B 303 GLU ILE VAL GLU TRP ASP LEU ASP ASP TYR GLU GLN ASP SEQRES 23 B 303 LEU MET ALA ASP ALA ALA GLU LYS LEU SER ASP GLN TYR SEQRES 24 B 303 ASP LYS ILE SER SEQRES 1 C 303 THR LYS VAL SER VAL VAL GLY ALA ALA GLY THR VAL GLY SEQRES 2 C 303 ALA ALA ALA GLY TYR ASN ILE ALA LEU ARG ASP ILE ALA SEQRES 3 C 303 ASP GLU VAL VAL PHE VAL ASP ILE PRO ASP LYS GLU ASP SEQRES 4 C 303 ASP THR VAL GLY GLN ALA ALA ASP THR ASN HIS GLY ILE SEQRES 5 C 303 ALA TYR ASP SER ASN THR ARG VAL ARG GLN GLY GLY TYR SEQRES 6 C 303 GLU ASP THR ALA GLY SER ASP VAL VAL VAL ILE THR ALA SEQRES 7 C 303 GLY ILE PRO ARG GLN PRO GLY GLN THR ARG ILE ASP LEU SEQRES 8 C 303 ALA GLY ASP ASN ALA PRO ILE MET GLU ASP ILE GLN SER SEQRES 9 C 303 SER LEU ASP GLU HIS ASN ASP ASP TYR ILE SER LEU THR SEQRES 10 C 303 THR SER ASN PRO VAL ASP LEU LEU ASN ARG HIS LEU TYR SEQRES 11 C 303 GLU ALA GLY ASP ARG SER ARG GLU GLN VAL ILE GLY PHE SEQRES 12 C 303 GLY GLY ARG LEU ASP SER ALA ARG PHE ARG TYR VAL LEU SEQRES 13 C 303 SER GLU GLU PHE ASP ALA PRO VAL GLN ASN VAL GLU GLY SEQRES 14 C 303 THR ILE LEU GLY GLU HIS GLY ASP ALA GLN VAL PRO VAL SEQRES 15 C 303 PHE SER LYS VAL SER VAL ASP GLY THR ASP PRO GLU PHE SEQRES 16 C 303 SER GLY ASP GLU LYS GLU GLN LEU LEU GLY ASP LEU GLN SEQRES 17 C 303 GLU SER ALA MET ASP VAL ILE GLU ARG LYS GLY ALA THR SEQRES 18 C 303 GLU TRP GLY PRO ALA ARG GLY VAL ALA HIS MET VAL GLU SEQRES 19 C 303 ALA ILE LEU HIS ASP THR GLY GLU VAL LEU PRO ALA SER SEQRES 20 C 303 VAL LYS LEU GLU GLY GLU PHE GLY HIS GLU ASP THR ALA SEQRES 21 C 303 PHE GLY VAL PRO VAL SER LEU GLY SER ASN GLY VAL GLU SEQRES 22 C 303 GLU ILE VAL GLU TRP ASP LEU ASP ASP TYR GLU GLN ASP SEQRES 23 C 303 LEU MET ALA ASP ALA ALA GLU LYS LEU SER ASP GLN TYR SEQRES 24 C 303 ASP LYS ILE SER SEQRES 1 D 303 THR LYS VAL SER VAL VAL GLY ALA ALA GLY THR VAL GLY SEQRES 2 D 303 ALA ALA ALA GLY TYR ASN ILE ALA LEU ARG ASP ILE ALA SEQRES 3 D 303 ASP GLU VAL VAL PHE VAL ASP ILE PRO ASP LYS GLU ASP SEQRES 4 D 303 ASP THR VAL GLY GLN ALA ALA ASP THR ASN HIS GLY ILE SEQRES 5 D 303 ALA TYR ASP SER ASN THR ARG VAL ARG GLN GLY GLY TYR SEQRES 6 D 303 GLU ASP THR ALA GLY SER ASP VAL VAL VAL ILE THR ALA SEQRES 7 D 303 GLY ILE PRO ARG GLN PRO GLY GLN THR ARG ILE ASP LEU SEQRES 8 D 303 ALA GLY ASP ASN ALA PRO ILE MET GLU ASP ILE GLN SER SEQRES 9 D 303 SER LEU ASP GLU HIS ASN ASP ASP TYR ILE SER LEU THR SEQRES 10 D 303 THR SER ASN PRO VAL ASP LEU LEU ASN ARG HIS LEU TYR SEQRES 11 D 303 GLU ALA GLY ASP ARG SER ARG GLU GLN VAL ILE GLY PHE SEQRES 12 D 303 GLY GLY ARG LEU ASP SER ALA ARG PHE ARG TYR VAL LEU SEQRES 13 D 303 SER GLU GLU PHE ASP ALA PRO VAL GLN ASN VAL GLU GLY SEQRES 14 D 303 THR ILE LEU GLY GLU HIS GLY ASP ALA GLN VAL PRO VAL SEQRES 15 D 303 PHE SER LYS VAL SER VAL ASP GLY THR ASP PRO GLU PHE SEQRES 16 D 303 SER GLY ASP GLU LYS GLU GLN LEU LEU GLY ASP LEU GLN SEQRES 17 D 303 GLU SER ALA MET ASP VAL ILE GLU ARG LYS GLY ALA THR SEQRES 18 D 303 GLU TRP GLY PRO ALA ARG GLY VAL ALA HIS MET VAL GLU SEQRES 19 D 303 ALA ILE LEU HIS ASP THR GLY GLU VAL LEU PRO ALA SER SEQRES 20 D 303 VAL LYS LEU GLU GLY GLU PHE GLY HIS GLU ASP THR ALA SEQRES 21 D 303 PHE GLY VAL PRO VAL SER LEU GLY SER ASN GLY VAL GLU SEQRES 22 D 303 GLU ILE VAL GLU TRP ASP LEU ASP ASP TYR GLU GLN ASP SEQRES 23 D 303 LEU MET ALA ASP ALA ALA GLU LYS LEU SER ASP GLN TYR SEQRES 24 D 303 ASP LYS ILE SER
HET CL A1001 1 HET CL A1005 1 HET CL B1003 1 HET CL B1006 1 HET CL C1004 1 HET CL C1007 1 HET CL D1002 1 HET CL D1008 1 HET NAD A3001 44 HET NAD B3002 44 HET NAD C3003 44 HET NAD D3004 44
HETNAM CL CHLORIDE ION HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE
FORMUL 5 CL 8(CL 1-) FORMUL 13 NAD 4(C21 H27 N7 O14 P2) FORMUL 17 HOH *677(H2 O1)
HELIX 1 1 GLY A 30 ARG A 43 1 14 HELIX 2 2 ILE A 54A ASP A 54C 5 3 HELIX 3 3 LYS A 55 ALA A 71 1 17 HELIX 4 4 GLY A 84 ALA A 89 5 6 HELIX 5 5 THR A 108 GLU A 129 1 22 HELIX 6 6 PRO A 141 GLY A 153 1 13 HELIX 7 7 SER A 156 GLU A 158 5 3 HELIX 8 8 GLY A 164 ASP A 181 1 18 HELIX 9 9 PRO A 183 GLN A 185 5 3 HELIX 10 10 PHE A 203 VAL A 206 5 4 HELIX 11 11 SER A 221 GLU A 241 1 21 HELIX 12 12 GLU A 247 HIS A 263 1 17 HELIX 13 13 GLU A 278 GLY A 280 5 3 HELIX 14 14 ASP A 308 SER A 330 1 23 HELIX 15 15 GLY B 30 ARG B 43 1 14 HELIX 16 16 ILE B 54A ASP B 54C 5 3 HELIX 17 17 LYS B 55 ALA B 71 1 17 HELIX 18 18 GLY B 84 ALA B 89 5 6 HELIX 19 19 THR B 108 GLU B 129 1 22 HELIX 20 20 PRO B 141 GLY B 153 1 13 HELIX 21 21 GLY B 164 ASP B 181 1 18 HELIX 22 22 PRO B 183 GLN B 185 5 3 HELIX 23 23 PHE B 203 VAL B 206 5 4 HELIX 24 24 SER B 221 GLU B 241 1 21 HELIX 25 25 GLU B 247 HIS B 263 1 17 HELIX 26 26 GLY B 277 HIS B 282 5 5 HELIX 27 27 ASP B 308 SER B 330 1 23 HELIX 28 28 GLY C 30 ARG C 43 1 14 HELIX 29 29 ILE C 54A ASP C 54C 5 3 HELIX 30 30 LYS C 55 ALA C 71 1 17 HELIX 31 31 GLY C 84 ALA C 89 5 6 HELIX 32 32 THR C 108 GLU C 129 1 22 HELIX 33 33 PRO C 141 GLY C 153 1 13 HELIX 34 34 SER C 156 GLU C 158 5 3 HELIX 35 35 GLY C 164 ASP C 181 1 18 HELIX 36 36 PRO C 183 GLN C 185 5 3 HELIX 37 37 PHE C 203 VAL C 206 5 4 HELIX 38 38 SER C 221 ARG C 242 1 22 HELIX 39 39 GLU C 247 HIS C 263 1 17 HELIX 40 40 GLU C 278 GLY C 280 5 3 HELIX 41 41 ASP C 308 SER C 330 1 23 HELIX 42 42 GLY D 30 ARG D 43 1 14 HELIX 43 43 ILE D 54A ASP D 54C 5 3 HELIX 44 44 LYS D 55 ALA D 71 1 17 HELIX 45 45 TYR D 85 ALA D 89 5 5 HELIX 46 46 THR D 108 GLU D 129 1 22 HELIX 47 47 PRO D 141 GLY D 153 1 13 HELIX 48 48 SER D 156 GLU D 158 5 3 HELIX 49 49 GLY D 164 ASP D 181 1 18 HELIX 50 50 PRO D 183 GLN D 185 5 3 HELIX 51 51 PHE D 203 VAL D 206 5 4 HELIX 52 52 SER D 221 GLU D 241 1 21 HELIX 53 53 GLU D 247 HIS D 263 1 17 HELIX 54 54 GLU D 278 GLY D 280 5 3 HELIX 55 55 ASP D 308 SER D 330 1 23
SHEET 1 AA 6 ARG A 77 GLN A 80 0 SHEET 2 AA 6 GLU A 48 VAL A 52 1 O VAL A 49 N ARG A 79 SHEET 3 AA 6 LYS A 23 VAL A 27 1 O VAL A 24 N VAL A 50 SHEET 4 AA 6 VAL A 93 ILE A 96 1 O VAL A 93 N SER A 25 SHEET 5 AA 6 ILE A 134 THR A 137 1 O ILE A 134 N VAL A 94 SHEET 6 AA 6 VAL A 160 GLY A 162 1 O ILE A 161 N THR A 137 SHEET 1 AB 2 VAL A 187 GLU A 188 0 SHEET 2 AB 2 SER A 207 VAL A 208 -1 O SER A 207 N GLU A 188 SHEET 1 AC 2 ILE A 191 GLY A 193 0 SHEET 2 AC 2 GLN A 199 PRO A 201 -1 O VAL A 200 N LEU A 192 SHEET 1 AD 3 VAL A 268 GLU A 276 0 SHEET 2 AD 3 GLU A 283 GLY A 294 -1 N ASP A 284 O LEU A 275 SHEET 3 AD 3 GLY A 297 ILE A 302 -1 O GLY A 297 N GLY A 294 SHEET 1 BA 6 ARG B 77 GLN B 80 0 SHEET 2 BA 6 GLU B 48 VAL B 52 1 O VAL B 49 N ARG B 79 SHEET 3 BA 6 LYS B 23 VAL B 27 1 O VAL B 24 N VAL B 50 SHEET 4 BA 6 VAL B 93 ILE B 96 1 O VAL B 93 N SER B 25 SHEET 5 BA 6 ILE B 134 THR B 137 1 O ILE B 134 N VAL B 94 SHEET 6 BA 6 VAL B 160 GLY B 162 1 O ILE B 161 N THR B 137 SHEET 1 BB 2 VAL B 187 GLU B 188 0 SHEET 2 BB 2 SER B 207 VAL B 208 -1 O SER B 207 N GLU B 188 SHEET 1 BC 2 ILE B 191 GLY B 193 0 SHEET 2 BC 2 GLN B 199 PRO B 201 -1 O VAL B 200 N LEU B 192 SHEET 1 BD 3 VAL B 268 LEU B 275 0 SHEET 2 BD 3 THR B 285 GLY B 294 -1 O THR B 285 N LEU B 275 SHEET 3 BD 3 GLY B 297 ILE B 302 -1 O GLY B 297 N GLY B 294 SHEET 1 CA 6 ARG C 77 GLN C 80 0 SHEET 2 CA 6 GLU C 48 VAL C 52 1 O VAL C 49 N ARG C 79 SHEET 3 CA 6 LYS C 23 VAL C 27 1 O VAL C 24 N VAL C 50 SHEET 4 CA 6 VAL C 93 ILE C 96 1 O VAL C 93 N SER C 25 SHEET 5 CA 6 ILE C 134 THR C 137 1 O ILE C 134 N VAL C 94 SHEET 6 CA 6 VAL C 160 GLY C 162 1 O ILE C 161 N THR C 137 SHEET 1 CB 2 VAL C 187 GLU C 188 0 SHEET 2 CB 2 SER C 207 VAL C 208 -1 O SER C 207 N GLU C 188 SHEET 1 CC 2 ILE C 191 GLY C 193 0 SHEET 2 CC 2 GLN C 199 PRO C 201 -1 O VAL C 200 N LEU C 192 SHEET 1 CD 3 VAL C 268 GLU C 276 0 SHEET 2 CD 3 GLU C 283 GLY C 294 -1 N ASP C 284 O LEU C 275 SHEET 3 CD 3 GLY C 297 ILE C 302 -1 O GLY C 297 N GLY C 294 SHEET 1 DA 6 ARG D 77 GLN D 80 0 SHEET 2 DA 6 GLU D 48 VAL D 52 1 O VAL D 49 N ARG D 79 SHEET 3 DA 6 LYS D 23 VAL D 27 1 O VAL D 24 N VAL D 50 SHEET 4 DA 6 VAL D 93 ILE D 96 1 O VAL D 93 N SER D 25 SHEET 5 DA 6 ILE D 134 THR D 137 1 O ILE D 134 N VAL D 94 SHEET 6 DA 6 VAL D 160 GLY D 162 1 O ILE D 161 N THR D 137 SHEET 1 DB 2 VAL D 187 GLU D 188 0 SHEET 2 DB 2 SER D 207 VAL D 208 -1 O SER D 207 N GLU D 188 SHEET 1 DC 2 ILE D 191 GLY D 193 0 SHEET 2 DC 2 GLN D 199 PRO D 201 -1 O VAL D 200 N LEU D 192 SHEET 1 DD 3 VAL D 268 GLU D 276 0 SHEET 2 DD 3 GLU D 283 GLY D 294 -1 N ASP D 284 O LEU D 275 SHEET 3 DD 3 GLY D 297 ILE D 302 -1 O GLY D 297 N GLY D 294
CISPEP 1 ASN A 140 PRO A 141 0 -10.80 CISPEP 2 ASN B 140 PRO B 141 0 -2.83 CISPEP 3 ASN C 140 PRO C 141 0 -3.70 CISPEP 4 ASN D 140 PRO D 141 0 -7.00
SITE 1 AC1 4 LYS A 205 ASP A 306 THR D 210B ASP D 211 SITE 1 AC2 6 ARG A 166 ARG A 252 HIS A 256 HOH A2113 SITE 2 AC2 6 TYR B 72 ASP B 73 SITE 1 AC3 4 LYS B 205 ASP B 306 THR C 210B ASP C 211 SITE 1 AC4 5 TYR A 72 ASP A 73 ARG B 166 ARG B 252 SITE 2 AC4 5 HIS B 256 SITE 1 AC5 4 THR B 210B ASP B 211 LYS C 205 ASP C 306 SITE 1 AC6 6 ARG C 166 ARG C 252 HIS C 256 TYR D 72 SITE 2 AC6 6 ASP D 73 HOH D2030 SITE 1 AC7 4 THR A 210B ASP A 211 LYS D 205 ASP D 306 SITE 1 AC8 6 TYR C 72 ASP C 73 ARG D 166 ARG D 252 SITE 2 AC8 6 HIS D 256 HOH D2129 SITE 1 AC9 22 GLY A 30 THR A 31 VAL A 32 ASP A 53 SITE 2 AC9 22 LYS A 55 THR A 97 ALA A 98 GLY A 99 SITE 3 AC9 22 ILE A 119 THR A 138 ASN A 140 VAL A 142 SITE 4 AC9 22 PHE A 163 GLY A 164 LEU A 167 HIS A 195 SITE 5 AC9 22 HOH A2004 HOH A2107 HOH A2156 HOH A2157 SITE 6 AC9 22 HOH A2159 HOH A2160 SITE 1 BC1 23 VAL B 27 ALA B 29B GLY B 30 THR B 31 SITE 2 BC1 23 VAL B 32 ASP B 53 ILE B 54A LYS B 55 SITE 3 BC1 23 TYR B 85 THR B 97 ALA B 98 GLY B 99 SITE 4 BC1 23 THR B 138 ASN B 140 VAL B 142 PHE B 163 SITE 5 BC1 23 LEU B 167 HIS B 195 HOH B2165 HOH B2166 SITE 6 BC1 23 HOH B2168 HOH B2169 HOH B2170 SITE 1 BC2 21 GLY C 30 THR C 31 VAL C 32 ASP C 53 SITE 2 BC2 21 LYS C 55 THR C 97 ALA C 98 GLY C 99 SITE 3 BC2 21 ILE C 119 THR C 138 ASN C 140 PHE C 163 SITE 4 BC2 21 LEU C 167 HIS C 195 HOH C2039 HOH C2044 SITE 5 BC2 21 HOH C2065 HOH C2123 HOH C2163 HOH C2164 SITE 6 BC2 21 HOH C2165 SITE 1 BC3 21 VAL D 27 GLY D 28 ALA D 29B GLY D 30 SITE 2 BC3 21 THR D 31 VAL D 32 ASP D 53 LYS D 55 SITE 3 BC3 21 TYR D 85 THR D 97 ALA D 98 GLY D 99 SITE 4 BC3 21 ILE D 119 THR D 138 ASN D 140 VAL D 142 SITE 5 BC3 21 LEU D 167 HIS D 195 HOH D2178 HOH D2179 SITE 6 BC3 21 HOH D2180
CRYST1 126.640 114.420 124.870 90.00 93.11 90.00 C 1 2 1 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007896 0.000000 0.000429 0.00000
SCALE2 0.000000 0.008740 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008020 0.00000
MTRIX1 1 -0.996350 -0.084004 -0.015169 55.65631 1
MTRIX2 1 -0.081693 0.886791 0.454893 -11.70613 1
MTRIX3 1 -0.024761 0.454471 -0.890417 58.82204 1
MTRIX1 2 0.993927 0.065860 0.088160 -2.73505 1
MTRIX2 2 0.065578 -0.997829 0.006093 -1.78311 1
MTRIX3 2 0.088370 -0.000274 -0.996088 59.14408 1
MTRIX1 3 -0.997705 0.016570 -0.065642 56.88684 1
MTRIX2 3 0.015789 -0.885900 -0.463607 13.81413 1
MTRIX3 3 -0.065834 -0.463580 0.883606 5.43093 1
MTRIX1 4 -0.997866 0.016972 -0.063046 56.75201 1
MTRIX2 4 0.013663 -0.889958 -0.455837 13.61702 1
MTRIX3 4 -0.063845 -0.455726 0.887827 5.10483 1
MTRIX1 5 0.994406 0.067311 0.081389 -2.42347 1
MTRIX2 5 0.067865 -0.997686 -0.004053 -2.17316 1
MTRIX3 5 0.080928 0.009554 -0.996674 59.48046 1
MTRIX1 6 -0.996524 -0.081403 -0.017663 55.33687 1
MTRIX2 6 -0.080407 0.884688 0.459195 -11.94307 1
MTRIX3 6 -0.021752 0.459019 -0.888159 58.76286 1