1O12 - Header Asymmetric Unit

HEADER HYDROLASE 15-OCT-02 1O12

TITLE CRYSTAL STRUCTURE OF N-ACETYLGLUCOSAMINE-6-PHOSPHATE TITLE 2 DEACETYLASE (TM0814) FROM THERMOTOGA MARITIMA AT 2.5 A TITLE 3 RESOLUTION

COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.5.1.25; COMPND 5 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: TM0814; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562

KEYWDS STRUCTURAL GENOMICS, TM0814, N-ACETYLGLUCOSAMINE-6- KEYWDS 2 PHOSPHATE DEACETYLASE, JCSG, PSI, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, JOINT CENTER FOR STRUCTURAL GENOMICS, HYDROLASE

EXPDTA X-RAY DIFFRACTION

AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG)

REVDAT 5 24-FEB-09 1O12 1 VERSN REVDAT 4 28-MAR-06 1O12 1 JRNL REVDAT 3 18-JAN-05 1O12 1 AUTHOR KEYWDS REMARK REVDAT 2 08-JUL-03 1O12 1 REMARK REVDAT 1 18-DEC-02 1O12 0

JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF JRNL TITL 2 N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE JRNL TITL 3 (TM0814) FROM THERMOTOGA MARITIMA AT 2.5 A JRNL TITL 4 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH AND HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 30509 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1515 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 30 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.53 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 898 REMARK 3 BIN R VALUE (WORKING SET) : 0.2528 REMARK 3 BIN FREE R VALUE : 0.3027 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.77 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 55 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5620 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 206 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.55200 REMARK 3 B22 (A**2) : -5.55200 REMARK 3 B33 (A**2) : 11.10500 REMARK 3 B12 (A**2) : -4.91200 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.62 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.291 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.089 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.514 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.594 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : BULK SOLVENT CORRECTION REMARK 3 KSOL : 36.61 REMARK 3 BSOL : 0.34 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: EXTRA DENSITY NEAR THE N-TERMINUS. N REMARK 3 -TERMINUS FROM SYMMETRY RELATED MOLECULES ARE CLOSE AND THE REMARK 3 EXTRA DENSITY COULD NOT EASILY BE INTERPRETED. THERE ARE TWO REMARK 3 MONOMERS IN THE ASYMMETRIC UNIT WITH 363 RESIDUES PER MONOMER. REMARK 3 THE C-TERMINAL RESIDUES (ARG 364) IN BOTH MONOMERS ARE REMARK 3 DISORDERED. REFINEMENTS STARTED WITH NCS AND THE NCS RELEASED REMARK 3 DURING THE FINAL STAGES. ONE FE ATOM PER MONOMER. THE FE ATOM REMARK 3 IN THE TM0814 WAS ASSIGNED BASED ON THE DENSITY, COORDINATION, REMARK 3 AND THE PRESENCE OF A FE ATOM AT THIS POSITION IN THE CYTOSINE REMARK 3 DEAMINASE STRUCTURE. THE LOWER NUMBER OF RESIDUES IN THE CORE REMARK 3 REGION SEEMS TO BE RELATED TO THE TYPE OF FOLD.

REMARK 4 REMARK 4 1O12 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-OCT-02. REMARK 100 THE RCSB ID CODE IS RCSB001669.

REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97903, 0.91837, 0.97874 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4, SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30706 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 42.533 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.40800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHAKE-N-BAKE, MLPHARE, CCP4, SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL

REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 % PEG 6000, 1.0 M LICL, 0.1 M REMARK 280 CITRIC ACID, PH 5.0, VAPOR DIFFUSION,SITTING DROP,NANODROP, REMARK 280 TEMPERATURE 293K, PH 5.00

REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.67000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 137.34000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 137.34000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 68.67000 REMARK 290 REMARK 290 REMARK: NULL

REMARK 300 REMARK 300 BIOMOLECULE: REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). THE BIOLOGICAL UNIT IS REMARK 300 UNKNOWN.

REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000

REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MSE B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 ASP B -8 REMARK 465 LYS B -7 REMARK 465 ILE B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0

REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 364 CA C O CB CG CD NE REMARK 470 ARG A 364 CZ NH1 NH2 REMARK 470 ARG B 364 CA C O CB CG CD NE REMARK 470 ARG B 364 CZ NH1 NH2

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 57 O HOH B 411 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 150 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 24 74.41 37.84 REMARK 500 VAL A 53 145.81 -170.92 REMARK 500 THR A 85 -168.99 -162.58 REMARK 500 PRO A 105 -16.03 -49.47 REMARK 500 ALA A 126 -7.46 76.23 REMARK 500 HIS A 197 75.74 19.98 REMARK 500 LYS A 246 173.59 64.77 REMARK 500 ASP A 264 87.40 -60.19 REMARK 500 THR A 267 -147.45 -114.10 REMARK 500 ASP A 271 58.36 -115.71 REMARK 500 SER A 318 -52.54 -155.05 REMARK 500 LEU A 348 30.82 71.01 REMARK 500 CYS B 35 168.91 147.78 REMARK 500 ARG B 38 -71.33 -75.51 REMARK 500 VAL B 54 59.27 37.12 REMARK 500 SER B 145 140.17 -39.90 REMARK 500 HIS B 197 71.66 17.90 REMARK 500 CYS B 228 56.29 -91.87 REMARK 500 LYS B 246 163.00 64.56 REMARK 500 THR B 267 -149.92 -136.04 REMARK 500 SER B 318 -71.75 -152.27 REMARK 500 REMARK 500 REMARK: NULL

REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 430 DISTANCE = 5.10 ANGSTROMS

REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 115 OE2 REMARK 620 2 HIS A 197 NE2 124.6 REMARK 620 3 HIS A 176 NE2 79.0 91.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 197 NE2 REMARK 620 2 HOH B 405 O 106.4 REMARK 620 3 HIS B 176 NE2 94.1 159.4 REMARK 620 4 GLU B 115 OE2 103.8 107.9 68.6 REMARK 620 N 1 2 3

REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 401 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE B 401

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TM0814 RELATED DB: TIGR REMARK 900 RELATED ID: 282684 RELATED DB: TARGETDB

DBREF 1O12 A 1 364 UNP Q9WZS1 Q9WZS1_THEMA 1 364 DBREF 1O12 B 1 364 UNP Q9WZS1 Q9WZS1_THEMA 1 364

SEQADV 1O12 MSE A -11 UNP Q9WZS1 LEADER SEQUENCE SEQADV 1O12 GLY A -10 UNP Q9WZS1 LEADER SEQUENCE SEQADV 1O12 SER A -9 UNP Q9WZS1 LEADER SEQUENCE SEQADV 1O12 ASP A -8 UNP Q9WZS1 LEADER SEQUENCE SEQADV 1O12 LYS A -7 UNP Q9WZS1 LEADER SEQUENCE SEQADV 1O12 ILE A -6 UNP Q9WZS1 LEADER SEQUENCE SEQADV 1O12 HIS A -5 UNP Q9WZS1 EXPRESSION TAG SEQADV 1O12 HIS A -4 UNP Q9WZS1 EXPRESSION TAG SEQADV 1O12 HIS A -3 UNP Q9WZS1 EXPRESSION TAG SEQADV 1O12 HIS A -2 UNP Q9WZS1 EXPRESSION TAG SEQADV 1O12 HIS A -1 UNP Q9WZS1 EXPRESSION TAG SEQADV 1O12 HIS A 0 UNP Q9WZS1 EXPRESSION TAG SEQADV 1O12 MSE A 1 UNP Q9WZS1 MET 1 MODIFIED RESIDUE SEQADV 1O12 MSE A 42 UNP Q9WZS1 MET 42 MODIFIED RESIDUE SEQADV 1O12 MSE A 59 UNP Q9WZS1 MET 59 MODIFIED RESIDUE SEQADV 1O12 MSE A 66 UNP Q9WZS1 MET 66 MODIFIED RESIDUE SEQADV 1O12 MSE A 90 UNP Q9WZS1 MET 90 MODIFIED RESIDUE SEQADV 1O12 MSE A 149 UNP Q9WZS1 MET 149 MODIFIED RESIDUE SEQADV 1O12 MSE A 185 UNP Q9WZS1 MET 185 MODIFIED RESIDUE SEQADV 1O12 MSE A 237 UNP Q9WZS1 MET 237 MODIFIED RESIDUE SEQADV 1O12 MSE A 352 UNP Q9WZS1 MET 352 MODIFIED RESIDUE SEQADV 1O12 MSE B -11 UNP Q9WZS1 LEADER SEQUENCE SEQADV 1O12 GLY B -10 UNP Q9WZS1 LEADER SEQUENCE SEQADV 1O12 SER B -9 UNP Q9WZS1 LEADER SEQUENCE SEQADV 1O12 ASP B -8 UNP Q9WZS1 LEADER SEQUENCE SEQADV 1O12 LYS B -7 UNP Q9WZS1 LEADER SEQUENCE SEQADV 1O12 ILE B -6 UNP Q9WZS1 LEADER SEQUENCE SEQADV 1O12 HIS B -5 UNP Q9WZS1 EXPRESSION TAG SEQADV 1O12 HIS B -4 UNP Q9WZS1 EXPRESSION TAG SEQADV 1O12 HIS B -3 UNP Q9WZS1 EXPRESSION TAG SEQADV 1O12 HIS B -2 UNP Q9WZS1 EXPRESSION TAG SEQADV 1O12 HIS B -1 UNP Q9WZS1 EXPRESSION TAG SEQADV 1O12 HIS B 0 UNP Q9WZS1 EXPRESSION TAG SEQADV 1O12 MSE B 1 UNP Q9WZS1 MET 1 MODIFIED RESIDUE SEQADV 1O12 MSE B 42 UNP Q9WZS1 MET 42 MODIFIED RESIDUE SEQADV 1O12 MSE B 59 UNP Q9WZS1 MET 59 MODIFIED RESIDUE SEQADV 1O12 MSE B 66 UNP Q9WZS1 MET 66 MODIFIED RESIDUE SEQADV 1O12 MSE B 90 UNP Q9WZS1 MET 90 MODIFIED RESIDUE SEQADV 1O12 MSE B 149 UNP Q9WZS1 MET 149 MODIFIED RESIDUE SEQADV 1O12 MSE B 185 UNP Q9WZS1 MET 185 MODIFIED RESIDUE SEQADV 1O12 MSE B 237 UNP Q9WZS1 MET 237 MODIFIED RESIDUE SEQADV 1O12 MSE B 352 UNP Q9WZS1 MET 352 MODIFIED RESIDUE

SEQRES 1 A 376 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 376 ILE VAL GLU LYS VAL LEU ILE VAL ASP PRO ILE ASP GLY SEQRES 3 A 376 GLU PHE THR GLY ASP VAL GLU ILE GLU GLU GLY LYS ILE SEQRES 4 A 376 VAL LYS VAL GLU LYS ARG GLU CYS ILE PRO ARG GLY VAL SEQRES 5 A 376 LEU MSE PRO GLY PHE VAL ASP PRO HIS ILE HIS GLY VAL SEQRES 6 A 376 VAL GLY ALA ASP THR MSE ASN CYS ASP PHE SER GLU MSE SEQRES 7 A 376 GLU GLU PHE LEU TYR SER GLN GLY VAL THR THR PHE LEU SEQRES 8 A 376 ALA THR THR VAL SER THR SER LEU GLU LYS MSE LYS GLU SEQRES 9 A 376 ILE LEU ARG LYS ALA ARG ASP TYR ILE LEU GLU ASN PRO SEQRES 10 A 376 SER THR SER LEU LEU GLY VAL HIS LEU GLU GLY PRO TYR SEQRES 11 A 376 ILE SER LYS GLU LYS LYS GLY ALA HIS SER GLU LYS HIS SEQRES 12 A 376 ILE ARG PRO PRO SER GLU ARG GLU LEU SER GLU ILE ASP SEQRES 13 A 376 SER PRO ALA LYS MSE LEU THR PHE ALA PRO GLU ILE GLU SEQRES 14 A 376 SER SER GLU LEU LEU LEU ARG LEU VAL LYS ARG ASP ILE SEQRES 15 A 376 VAL LEU SER ALA GLY HIS SER ILE ALA THR PHE GLU GLU SEQRES 16 A 376 PHE MSE LYS PHE TYR LYS GLU GLY VAL LYS ARG ILE THR SEQRES 17 A 376 HIS PHE PRO ASN GLY LEU LYS PRO LEU HIS HIS ARG GLU SEQRES 18 A 376 ILE GLY ILE THR GLY ALA GLY LEU LEU LEU ASP ASP VAL SEQRES 19 A 376 LYS LEU GLU LEU ILE CYS ASP GLY VAL HIS LEU SER ARG SEQRES 20 A 376 GLU MSE VAL LYS LEU VAL TYR LYS VAL LYS LYS ALA ASN SEQRES 21 A 376 GLY ILE VAL LEU VAL THR ASP SER ILE SER ALA ALA GLY SEQRES 22 A 376 LEU LYS ASP GLY THR THR THR LEU GLY ASP LEU VAL VAL SEQRES 23 A 376 LYS VAL LYS ASP GLY VAL PRO ARG LEU GLU ASP GLY THR SEQRES 24 A 376 LEU ALA GLY SER THR LEU PHE PHE SER GLN ALA VAL LYS SEQRES 25 A 376 ASN PHE ARG LYS PHE THR GLY CYS SER ILE THR GLU LEU SEQRES 26 A 376 ALA LYS VAL SER SER TYR ASN SER CYS VAL GLU LEU GLY SEQRES 27 A 376 LEU ASP ASP ARG GLY ARG ILE ALA GLU GLY THR ARG ALA SEQRES 28 A 376 ASP LEU VAL LEU LEU ASP GLU ASP LEU ASN VAL VAL MSE SEQRES 29 A 376 THR ILE LYS GLU GLY GLU VAL VAL PHE ARG SER ARG SEQRES 1 B 376 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 B 376 ILE VAL GLU LYS VAL LEU ILE VAL ASP PRO ILE ASP GLY SEQRES 3 B 376 GLU PHE THR GLY ASP VAL GLU ILE GLU GLU GLY LYS ILE SEQRES 4 B 376 VAL LYS VAL GLU LYS ARG GLU CYS ILE PRO ARG GLY VAL SEQRES 5 B 376 LEU MSE PRO GLY PHE VAL ASP PRO HIS ILE HIS GLY VAL SEQRES 6 B 376 VAL GLY ALA ASP THR MSE ASN CYS ASP PHE SER GLU MSE SEQRES 7 B 376 GLU GLU PHE LEU TYR SER GLN GLY VAL THR THR PHE LEU SEQRES 8 B 376 ALA THR THR VAL SER THR SER LEU GLU LYS MSE LYS GLU SEQRES 9 B 376 ILE LEU ARG LYS ALA ARG ASP TYR ILE LEU GLU ASN PRO SEQRES 10 B 376 SER THR SER LEU LEU GLY VAL HIS LEU GLU GLY PRO TYR SEQRES 11 B 376 ILE SER LYS GLU LYS LYS GLY ALA HIS SER GLU LYS HIS SEQRES 12 B 376 ILE ARG PRO PRO SER GLU ARG GLU LEU SER GLU ILE ASP SEQRES 13 B 376 SER PRO ALA LYS MSE LEU THR PHE ALA PRO GLU ILE GLU SEQRES 14 B 376 SER SER GLU LEU LEU LEU ARG LEU VAL LYS ARG ASP ILE SEQRES 15 B 376 VAL LEU SER ALA GLY HIS SER ILE ALA THR PHE GLU GLU SEQRES 16 B 376 PHE MSE LYS PHE TYR LYS GLU GLY VAL LYS ARG ILE THR SEQRES 17 B 376 HIS PHE PRO ASN GLY LEU LYS PRO LEU HIS HIS ARG GLU SEQRES 18 B 376 ILE GLY ILE THR GLY ALA GLY LEU LEU LEU ASP ASP VAL SEQRES 19 B 376 LYS LEU GLU LEU ILE CYS ASP GLY VAL HIS LEU SER ARG SEQRES 20 B 376 GLU MSE VAL LYS LEU VAL TYR LYS VAL LYS LYS ALA ASN SEQRES 21 B 376 GLY ILE VAL LEU VAL THR ASP SER ILE SER ALA ALA GLY SEQRES 22 B 376 LEU LYS ASP GLY THR THR THR LEU GLY ASP LEU VAL VAL SEQRES 23 B 376 LYS VAL LYS ASP GLY VAL PRO ARG LEU GLU ASP GLY THR SEQRES 24 B 376 LEU ALA GLY SER THR LEU PHE PHE SER GLN ALA VAL LYS SEQRES 25 B 376 ASN PHE ARG LYS PHE THR GLY CYS SER ILE THR GLU LEU SEQRES 26 B 376 ALA LYS VAL SER SER TYR ASN SER CYS VAL GLU LEU GLY SEQRES 27 B 376 LEU ASP ASP ARG GLY ARG ILE ALA GLU GLY THR ARG ALA SEQRES 28 B 376 ASP LEU VAL LEU LEU ASP GLU ASP LEU ASN VAL VAL MSE SEQRES 29 B 376 THR ILE LYS GLU GLY GLU VAL VAL PHE ARG SER ARG

MODRES 1O12 MSE A 1 MET SELENOMETHIONINE MODRES 1O12 MSE A 42 MET SELENOMETHIONINE MODRES 1O12 MSE A 59 MET SELENOMETHIONINE MODRES 1O12 MSE A 66 MET SELENOMETHIONINE MODRES 1O12 MSE A 90 MET SELENOMETHIONINE MODRES 1O12 MSE A 149 MET SELENOMETHIONINE MODRES 1O12 MSE A 185 MET SELENOMETHIONINE MODRES 1O12 MSE A 237 MET SELENOMETHIONINE MODRES 1O12 MSE A 352 MET SELENOMETHIONINE MODRES 1O12 MSE B 1 MET SELENOMETHIONINE MODRES 1O12 MSE B 42 MET SELENOMETHIONINE MODRES 1O12 MSE B 59 MET SELENOMETHIONINE MODRES 1O12 MSE B 66 MET SELENOMETHIONINE MODRES 1O12 MSE B 90 MET SELENOMETHIONINE MODRES 1O12 MSE B 149 MET SELENOMETHIONINE MODRES 1O12 MSE B 185 MET SELENOMETHIONINE MODRES 1O12 MSE B 237 MET SELENOMETHIONINE MODRES 1O12 MSE B 352 MET SELENOMETHIONINE

HET MSE A 1 8 HET MSE A 42 8 HET MSE A 59 8 HET MSE A 66 8 HET MSE A 90 8 HET MSE A 149 8 HET MSE A 185 8 HET MSE A 237 8 HET MSE A 352 8 HET MSE B 1 8 HET MSE B 42 8 HET MSE B 59 8 HET MSE B 66 8 HET MSE B 90 8 HET MSE B 149 8 HET MSE B 185 8 HET MSE B 237 8 HET MSE B 352 8 HET FE A 401 1 HET FE B 401 1

HETNAM MSE SELENOMETHIONINE HETNAM FE FE (III) ION

FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 3 FE 2(FE 3+) FORMUL 5 HOH *206(H2 O)

HELIX 1 1 ASP A 62 SER A 72 1 11 HELIX 2 2 SER A 86 ASN A 104 1 19 HELIX 3 3 SER A 120 LYS A 124 5 5 HELIX 4 4 SER A 136 SER A 141 1 6 HELIX 5 5 SER A 158 ASP A 169 5 12 HELIX 6 6 THR A 180 LYS A 189 1 10 HELIX 7 7 ILE A 210 LEU A 219 1 10 HELIX 8 8 SER A 234 LYS A 246 1 13 HELIX 9 9 PHE A 294 GLY A 307 1 14 HELIX 10 10 SER A 309 SER A 318 1 10 HELIX 11 11 SER A 318 LEU A 325 1 8 HELIX 12 12 ASP B 62 SER B 72 1 11 HELIX 13 13 SER B 86 ASN B 104 1 19 HELIX 14 14 SER B 136 GLU B 142 1 7 HELIX 15 15 SER B 158 ASP B 169 5 12 HELIX 16 16 THR B 180 GLU B 190 1 11 HELIX 17 17 ILE B 210 LEU B 219 1 10 HELIX 18 18 SER B 234 LYS B 246 1 13 HELIX 19 19 PHE B 294 GLY B 307 1 14 HELIX 20 20 SER B 309 SER B 318 1 10 HELIX 21 21 SER B 318 GLY B 326 1 9

SHEET 1 A 7 LYS A 26 LYS A 32 0 SHEET 2 A 7 GLY A 14 GLU A 23 -1 N GLU A 21 O LYS A 29 SHEET 3 A 7 ILE A 2 ASP A 10 -1 N VAL A 3 O VAL A 20 SHEET 4 A 7 VAL A 40 PRO A 43 1 O LEU A 41 N LEU A 7 SHEET 5 A 7 LEU A 341 LEU A 344 -1 O LEU A 344 N VAL A 40 SHEET 6 A 7 VAL A 350 LYS A 355 -1 O MSE A 352 N LEU A 343 SHEET 7 A 7 GLU A 358 ARG A 362 -1 O VAL A 360 N THR A 353 SHEET 1 B 5 PHE A 45 ILE A 50 0 SHEET 2 B 5 VAL A 75 THR A 81 1 O THR A 81 N ILE A 50 SHEET 3 B 5 LEU A 109 GLU A 115 1 O LEU A 110 N PHE A 78 SHEET 4 B 5 ALA A 147 PHE A 152 1 O LYS A 148 N VAL A 112 SHEET 5 B 5 VAL A 171 ALA A 174 1 O VAL A 171 N LEU A 150 SHEET 1 C 2 GLY A 52 VAL A 53 0 SHEET 2 C 2 ALA A 56 ASP A 57 -1 O ALA A 56 N VAL A 53 SHEET 1 D 3 ARG A 194 ILE A 195 0 SHEET 2 D 3 LYS A 223 ILE A 227 1 O GLU A 225 N ILE A 195 SHEET 3 D 3 ILE A 250 VAL A 253 1 O VAL A 251 N LEU A 224 SHEET 1 E 3 THR A 266 THR A 268 0 SHEET 2 E 3 VAL A 273 LYS A 277 -1 O VAL A 274 N THR A 267 SHEET 3 E 3 VAL A 280 ARG A 282 -1 O ARG A 282 N LYS A 275 SHEET 1 F 7 LYS B 26 LYS B 32 0 SHEET 2 F 7 GLY B 14 GLU B 23 -1 N GLU B 21 O LYS B 29 SHEET 3 F 7 ILE B 2 ASP B 10 -1 N VAL B 3 O VAL B 20 SHEET 4 F 7 VAL B 40 PRO B 43 1 O LEU B 41 N LEU B 7 SHEET 5 F 7 LEU B 341 LEU B 344 -1 O LEU B 344 N VAL B 40 SHEET 6 F 7 VAL B 350 LYS B 355 -1 O MSE B 352 N LEU B 343 SHEET 7 F 7 GLU B 358 ARG B 362 -1 O GLU B 358 N LYS B 355 SHEET 1 G 5 PHE B 45 ILE B 50 0 SHEET 2 G 5 VAL B 75 THR B 81 1 O THR B 77 N ASP B 47 SHEET 3 G 5 LEU B 109 GLU B 115 1 O HIS B 113 N ALA B 80 SHEET 4 G 5 ALA B 147 PHE B 152 1 O MSE B 149 N LEU B 114 SHEET 5 G 5 VAL B 171 ALA B 174 1 O VAL B 171 N LEU B 150 SHEET 1 H 2 GLY B 52 VAL B 53 0 SHEET 2 H 2 ALA B 56 ASP B 57 -1 O ALA B 56 N VAL B 53 SHEET 1 I 3 ARG B 194 ILE B 195 0 SHEET 2 I 3 LYS B 223 ILE B 227 1 O GLU B 225 N ILE B 195 SHEET 3 I 3 ILE B 250 VAL B 253 1 O VAL B 251 N LEU B 224 SHEET 1 J 3 GLY B 265 LEU B 269 0 SHEET 2 J 3 LEU B 272 LYS B 277 -1 O VAL B 276 N GLY B 265 SHEET 3 J 3 VAL B 280 ARG B 282 -1 O ARG B 282 N LYS B 275

LINK C MSE A 1 N ILE A 2 1555 1555 1.32 LINK C LEU A 41 N MSE A 42 1555 1555 1.33 LINK C MSE A 42 N PRO A 43 1555 1555 1.35 LINK C THR A 58 N MSE A 59 1555 1555 1.33 LINK C MSE A 59 N ASN A 60 1555 1555 1.33 LINK C GLU A 65 N MSE A 66 1555 1555 1.33 LINK C MSE A 66 N GLU A 67 1555 1555 1.34 LINK C LYS A 89 N MSE A 90 1555 1555 1.32 LINK C MSE A 90 N LYS A 91 1555 1555 1.34 LINK C LYS A 148 N MSE A 149 1555 1555 1.33 LINK C MSE A 149 N LEU A 150 1555 1555 1.32 LINK C PHE A 184 N MSE A 185 1555 1555 1.33 LINK C MSE A 185 N LYS A 186 1555 1555 1.33 LINK C GLU A 236 N MSE A 237 1555 1555 1.33 LINK C MSE A 237 N VAL A 238 1555 1555 1.33 LINK C VAL A 351 N MSE A 352 1555 1555 1.32 LINK C MSE A 352 N THR A 353 1555 1555 1.32 LINK FE FE A 401 OE2 GLU A 115 1555 1555 2.20 LINK FE FE A 401 NE2 HIS A 197 1555 1555 2.32 LINK FE FE A 401 NE2 HIS A 176 1555 1555 2.23 LINK C MSE B 1 N ILE B 2 1555 1555 1.33 LINK C LEU B 41 N MSE B 42 1555 1555 1.33 LINK C MSE B 42 N PRO B 43 1555 1555 1.34 LINK C THR B 58 N MSE B 59 1555 1555 1.33 LINK C MSE B 59 N ASN B 60 1555 1555 1.33 LINK C GLU B 65 N MSE B 66 1555 1555 1.33 LINK C MSE B 66 N GLU B 67 1555 1555 1.33 LINK C LYS B 89 N MSE B 90 1555 1555 1.32 LINK C MSE B 90 N LYS B 91 1555 1555 1.33 LINK C LYS B 148 N MSE B 149 1555 1555 1.33 LINK C MSE B 149 N LEU B 150 1555 1555 1.34 LINK C PHE B 184 N MSE B 185 1555 1555 1.34 LINK C MSE B 185 N LYS B 186 1555 1555 1.33 LINK C GLU B 236 N MSE B 237 1555 1555 1.34 LINK C MSE B 237 N VAL B 238 1555 1555 1.33 LINK C VAL B 351 N MSE B 352 1555 1555 1.32 LINK C MSE B 352 N THR B 353 1555 1555 1.33 LINK FE FE B 401 NE2 HIS B 197 1555 1555 2.33 LINK FE FE B 401 O HOH B 405 1555 1555 2.65 LINK FE FE B 401 NE2 HIS B 176 1555 1555 2.35 LINK FE FE B 401 OE2 GLU B 115 1555 1555 2.18

CISPEP 1 GLY A 116 PRO A 117 0 0.63 CISPEP 2 SER A 145 PRO A 146 0 0.58 CISPEP 3 PHE A 198 PRO A 199 0 -0.07 CISPEP 4 GLY B 116 PRO B 117 0 0.23 CISPEP 5 SER B 145 PRO B 146 0 0.31 CISPEP 6 PHE B 198 PRO B 199 0 0.00

SITE 1 AC1 5 GLU A 115 HIS A 176 HIS A 197 HOH A 408 SITE 2 AC1 5 HOH A 491 SITE 1 AC2 5 GLU B 115 HIS B 176 HIS B 197 HOH B 405 SITE 2 AC2 5 HOH B 407

CRYST1 85.070 85.070 206.010 90.00 90.00 120.00 P 31 2 1 12

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 0.011755 0.006787 0.000000 0.00000

SCALE2 0.000000 0.013574 0.000000 0.00000

SCALE3 0.000000 0.000000 0.004854 0.00000