10 20 30 40 50 60 70 80 1O0L - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER APOPTOSIS 22-FEB-03 1O0L
TITLE THE STRUCTURE OF BCL-W REVEALS A ROLE FOR THE C-TERMINAL TITLE 2 RESIDUES IN MODULATING BIOLOGICAL ACTIVITY
COMPND MOL_ID: 1; COMPND 2 MOLECULE: APOPTOSIS REGULATOR BCL-W; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BCL2-LIKE 2 PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL2L2 OR BCLW OR KIAA0271; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX6P-3
KEYWDS APOPTOSIS, BCL-2, HELICAL BUNDLE, BINDING GROOVE, BH3
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.G.HINDS,M.LACKMANN,G.L.SKEA,P.J.HARRISON,D.C.S.HUANG, AUTHOR 2 C.L.DAY
REVDAT 2 24-FEB-09 1O0L 1 VERSN REVDAT 1 01-APR-03 1O0L 0
JRNL AUTH M.G.HINDS,M.LACKMANN,G.L.SKEA,P.J.HARRISON, JRNL AUTH 2 D.C.S.HUANG,C.L.DAY JRNL TITL THE STRUCTURE OF BCL-W REVEALS A ROLE FOR THE JRNL TITL 2 C-TERMINAL RESIDUES IN MODULATING BIOLOGICAL JRNL TITL 3 ACTIVITY JRNL REF EMBO J. V. 22 1497 2003 JRNL REFN ISSN 0261-4189 JRNL PMID 12660157 JRNL DOI 10.1093/EMBOJ/CDG144
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER ET AL. ACTA CRYSTALLOGR. D, 1998, 54, REMARK 3 905-921. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL REMARK 3 OF 3871 CONSTRAINTS. DISTANCE CONSTRAINTS: 694 INTRARESIDUE; REMARK 3 843 SEQUENTIAL; 912 SHORT RANGE; 993 LONG RANGE; 64 HYDROGEN REMARK 3 BONDS DIHEDRAL ANGLE CONSTRAINTS: 136 PHI CONSTRAINTS; 101 PSI REMARK 3 CONSTRAINTS; 34 CHI1 CONSTRAINTS; 30 CHI2 CONSTRAINTS
REMARK 4 REMARK 4 1O0L COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAR-03. REMARK 100 THE RCSB ID CODE IS RCSB018424.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303.15; 303.15; 303.15 REMARK 210 PH : 6.7; 6.7; 6.7 REMARK 210 IONIC STRENGTH : 120MM; 120MM; 120MM REMARK 210 PRESSURE : AMBIENT; AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM BCL-W; 1 MM, U-15N BCL- REMARK 210 W; 1 MM, U-13C, 15N, BCL-W REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 3D_15N-SEPARATED_ REMARK 210 NOESY, HNHA, 3D_13C-SEPARATED_ REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, XEASY 1.3, DYANA REMARK 210 1.5 REMARK 210 METHOD USED : DISTANCE GEOMETRY TORSION REMARK 210 ANGLE DYNAMICS SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 256 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING HETERONUCLEAR 3D NMR.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A -2 -149.77 -122.88 REMARK 500 1 SER A 6 88.65 59.23 REMARK 500 1 PRO A 8 52.38 -69.13 REMARK 500 1 TYR A 27 52.96 -91.20 REMARK 500 1 PRO A 37 -158.07 -93.94 REMARK 500 1 LEU A 42 -32.32 -179.49 REMARK 500 1 THR A 60 -61.02 -120.05 REMARK 500 1 VAL A 70 -60.83 -90.88 REMARK 500 1 THR A 71 145.70 -172.70 REMARK 500 1 PRO A 72 -158.33 -78.11 REMARK 500 1 PRO A 91 41.89 -81.08 REMARK 500 1 ALA A 177 29.29 -79.67 REMARK 500 1 ALA A 182 -168.20 -109.85 REMARK 500 2 PRO A 4 37.18 -82.70 REMARK 500 2 PRO A 37 -159.87 -97.55 REMARK 500 2 PRO A 41 47.03 -80.12 REMARK 500 2 LEU A 42 -31.97 -175.07 REMARK 500 2 ARG A 56 -61.22 -92.92 REMARK 500 2 ARG A 59 46.43 -81.39 REMARK 500 2 VAL A 70 -60.11 -93.01 REMARK 500 2 THR A 71 146.96 -174.69 REMARK 500 2 SER A 74 48.96 -73.81 REMARK 500 2 PRO A 91 38.38 -80.47 REMARK 500 2 LYS A 113 -155.13 -138.27 REMARK 500 2 GLU A 114 53.64 -99.16 REMARK 500 3 LYS A 25 78.43 -153.60 REMARK 500 3 TYR A 27 56.52 -91.85 REMARK 500 3 PRO A 37 -154.63 -94.39 REMARK 500 3 PRO A 41 36.58 -71.36 REMARK 500 3 LEU A 42 -27.78 -167.81 REMARK 500 3 THR A 60 -57.43 -121.33 REMARK 500 3 VAL A 70 -63.47 -91.37 REMARK 500 3 THR A 71 144.47 -172.88 REMARK 500 3 LYS A 113 -151.45 -132.53 REMARK 500 3 GLU A 114 51.09 -108.69 REMARK 500 3 MET A 115 42.24 -146.87 REMARK 500 3 TYR A 151 30.30 -142.35 REMARK 500 4 LEU A -2 92.38 67.84 REMARK 500 4 ASP A 9 -157.58 -90.34 REMARK 500 4 LYS A 25 83.40 -154.56 REMARK 500 4 TYR A 27 54.79 -98.68 REMARK 500 4 PRO A 37 -147.34 -91.33 REMARK 500 4 PRO A 41 48.46 -80.74 REMARK 500 4 LEU A 42 -30.18 -177.27 REMARK 500 4 THR A 60 -70.94 -120.41 REMARK 500 4 VAL A 70 -68.37 -91.86 REMARK 500 4 PRO A 91 39.80 -80.50 REMARK 500 4 LYS A 113 -169.25 -126.90 REMARK 500 5 TYR A 27 51.15 -92.21 REMARK 500 5 PRO A 37 -139.15 -84.54 REMARK 500 5 PRO A 41 45.61 -77.08 REMARK 500 5 LEU A 42 -27.47 -173.93 REMARK 500 5 VAL A 70 -62.37 -90.56 REMARK 500 5 SER A 74 34.87 -76.44 REMARK 500 5 PRO A 91 41.19 -79.90 REMARK 500 5 GLU A 114 46.92 -90.95 REMARK 500 5 MET A 115 37.15 -142.22 REMARK 500 5 ARG A 133 -41.36 -130.59 REMARK 500 5 LEU A 180 63.93 -101.04 REMARK 500 5 ALA A 182 -4.76 -161.45 REMARK 500 6 MET A 1 -171.00 63.53 REMARK 500 6 ASP A 9 -162.27 -78.18 REMARK 500 6 LYS A 25 78.17 -154.71 REMARK 500 6 TYR A 27 50.50 -90.59 REMARK 500 6 PRO A 37 -151.56 -98.41 REMARK 500 6 LEU A 42 -32.23 -178.97 REMARK 500 6 VAL A 70 -70.61 -90.85 REMARK 500 6 SER A 74 46.39 -74.39 REMARK 500 6 PRO A 91 46.95 -75.87 REMARK 500 6 LYS A 113 -152.44 -125.72 REMARK 500 6 GLU A 114 50.81 -108.19 REMARK 500 6 THR A 175 96.91 -57.01 REMARK 500 7 ALA A 5 84.27 -156.73 REMARK 500 7 LYS A 25 77.70 -156.31 REMARK 500 7 PRO A 37 -155.74 -93.50 REMARK 500 7 PRO A 41 49.39 -81.54 REMARK 500 7 LEU A 42 -33.42 -179.68 REMARK 500 7 VAL A 70 -76.39 -91.49 REMARK 500 7 PRO A 91 42.07 -80.65 REMARK 500 7 LYS A 113 -152.79 -121.42 REMARK 500 7 GLU A 114 47.98 -108.68 REMARK 500 8 ASP A 9 -151.70 -89.30 REMARK 500 8 LYS A 25 79.40 -158.16 REMARK 500 8 PRO A 37 -150.27 -96.06 REMARK 500 8 PRO A 41 41.12 -78.27 REMARK 500 8 LEU A 42 -28.84 -170.44 REMARK 500 8 ARG A 59 37.84 -78.19 REMARK 500 8 VAL A 70 -74.99 -90.54 REMARK 500 8 SER A 74 41.81 -74.24 REMARK 500 8 PRO A 91 38.98 -80.70 REMARK 500 8 GLU A 114 57.84 -90.78 REMARK 500 9 PRO A 8 40.75 -72.99 REMARK 500 9 ASP A 9 -156.65 -90.89 REMARK 500 9 LYS A 25 63.09 -156.47 REMARK 500 9 PRO A 37 -133.83 -90.53 REMARK 500 9 PRO A 41 37.03 -81.36 REMARK 500 9 LEU A 42 -29.93 -165.61 REMARK 500 9 THR A 60 -51.07 -121.27 REMARK 500 9 VAL A 70 -65.25 -91.50 REMARK 500 9 PRO A 91 45.78 -77.80 REMARK 500 9 ASN A 166 -71.39 -69.40 REMARK 500 10 MET A 1 146.01 73.81 REMARK 500 10 LEU A 42 -31.55 -178.96 REMARK 500 10 ARG A 56 -65.62 -105.06 REMARK 500 10 ARG A 59 40.90 -87.34 REMARK 500 10 VAL A 70 -68.82 -91.42 REMARK 500 10 SER A 74 44.62 -75.68 REMARK 500 10 PRO A 91 40.81 -80.44 REMARK 500 10 MET A 115 37.23 -140.95 REMARK 500 11 LYS A 25 -56.19 -132.16 REMARK 500 11 TYR A 27 46.06 -78.32 REMARK 500 11 PRO A 37 -150.49 -87.50 REMARK 500 11 LEU A 42 -32.66 179.82 REMARK 500 11 ARG A 59 79.11 -119.65 REMARK 500 11 VAL A 70 -68.87 -91.62 REMARK 500 11 SER A 74 28.19 -74.83 REMARK 500 11 PRO A 91 36.76 -81.37 REMARK 500 11 GLU A 114 143.57 65.35 REMARK 500 11 MET A 115 126.47 76.86 REMARK 500 11 GLU A 116 -58.11 -120.53 REMARK 500 12 LYS A 25 79.90 -150.04 REMARK 500 12 TYR A 27 55.57 -96.68 REMARK 500 12 PRO A 37 -141.90 -94.58 REMARK 500 12 PRO A 41 45.51 -81.31 REMARK 500 12 LEU A 42 -30.44 -174.27 REMARK 500 12 VAL A 70 -77.88 -91.34 REMARK 500 12 SER A 74 42.37 -74.57 REMARK 500 12 PRO A 91 42.18 -78.77 REMARK 500 12 MET A 115 36.87 -140.32 REMARK 500 13 LYS A 25 -58.88 -121.19 REMARK 500 13 TYR A 27 49.44 -81.44 REMARK 500 13 PRO A 37 -143.17 -89.31 REMARK 500 13 ALA A 39 -33.73 -147.59 REMARK 500 13 PRO A 41 48.70 -77.83 REMARK 500 13 LEU A 42 -29.96 -177.27 REMARK 500 13 VAL A 70 -67.90 -92.26 REMARK 500 13 PRO A 72 -153.56 -89.36 REMARK 500 13 SER A 74 47.18 -74.94 REMARK 500 13 PRO A 91 41.36 -80.09 REMARK 500 14 LEU A -2 77.15 65.36 REMARK 500 14 PRO A 8 49.32 -73.56 REMARK 500 14 LYS A 25 76.25 -151.08 REMARK 500 14 TYR A 27 56.43 -90.26 REMARK 500 14 PRO A 41 28.77 -70.76 REMARK 500 14 LEU A 42 -23.51 -166.78 REMARK 500 14 VAL A 70 -73.24 -91.76 REMARK 500 14 SER A 74 24.96 -75.99 REMARK 500 14 PRO A 91 39.06 -82.78 REMARK 500 14 LYS A 113 -167.51 -127.48 REMARK 500 14 MET A 115 37.75 -141.66 REMARK 500 15 LYS A 25 76.14 -160.10 REMARK 500 15 PRO A 37 -155.13 -94.79 REMARK 500 15 PRO A 41 47.20 -81.32 REMARK 500 15 LEU A 42 -30.90 -177.94 REMARK 500 15 VAL A 70 -71.92 -91.92 REMARK 500 15 SER A 74 45.13 -73.61 REMARK 500 15 PRO A 91 41.66 -81.74 REMARK 500 15 LEU A 180 36.03 -92.98 REMARK 500 16 MET A 1 123.92 76.65 REMARK 500 16 LYS A 25 79.93 -153.95 REMARK 500 16 PRO A 37 -138.64 -89.31 REMARK 500 16 LEU A 42 -33.44 179.16 REMARK 500 16 THR A 60 -59.16 -120.10 REMARK 500 16 VAL A 70 -64.74 -91.68 REMARK 500 16 SER A 74 39.81 -73.92 REMARK 500 16 PRO A 91 39.37 -79.90 REMARK 500 17 LEU A -2 -55.36 72.51 REMARK 500 17 ASP A 9 -168.35 -77.48 REMARK 500 17 LYS A 25 -52.70 -146.26 REMARK 500 17 LEU A 42 -31.06 179.53 REMARK 500 17 THR A 60 -55.82 -121.55 REMARK 500 17 VAL A 70 -63.36 -92.01 REMARK 500 17 SER A 74 47.39 -74.45 REMARK 500 17 PRO A 91 44.94 -79.43 REMARK 500 17 LYS A 113 -168.29 -119.67 REMARK 500 17 GLU A 114 58.43 -94.86 REMARK 500 17 ARG A 133 -42.91 -131.95 REMARK 500 17 ALA A 177 25.72 -79.97 REMARK 500 18 LEU A -2 -55.17 73.54 REMARK 500 18 PRO A 4 98.04 -67.54 REMARK 500 18 ALA A 5 42.53 -88.65 REMARK 500 18 LYS A 25 75.34 -158.36 REMARK 500 18 PRO A 37 -148.53 -89.05 REMARK 500 18 ALA A 39 -34.78 -133.70 REMARK 500 18 LEU A 42 -34.12 179.59 REMARK 500 18 THR A 71 144.51 -171.97 REMARK 500 18 SER A 74 48.59 -74.37 REMARK 500 18 PRO A 91 37.01 -81.37 REMARK 500 19 LEU A -2 -83.71 -78.70 REMARK 500 19 MET A 1 152.72 73.83 REMARK 500 19 ALA A 5 -47.28 -170.59 REMARK 500 19 PRO A 8 34.93 -75.13 REMARK 500 19 ASP A 9 -159.08 -84.75 REMARK 500 19 LYS A 25 72.19 -157.43 REMARK 500 19 PRO A 37 -132.08 -88.28 REMARK 500 19 ALA A 39 39.90 -146.93 REMARK 500 19 PRO A 41 49.63 -82.39 REMARK 500 19 LEU A 42 -27.84 179.80 REMARK 500 19 ARG A 59 51.69 -96.88 REMARK 500 19 VAL A 70 -72.69 -91.87 REMARK 500 19 ASN A 112 -70.25 -45.73 REMARK 500 19 LYS A 113 37.45 -175.55 REMARK 500 19 MET A 115 114.84 70.31 REMARK 500 20 MET A 1 -56.41 70.86 REMARK 500 20 SER A 6 96.94 62.68 REMARK 500 20 LYS A 25 77.89 -150.44 REMARK 500 20 TYR A 27 59.67 -92.57 REMARK 500 20 PRO A 37 -112.00 -85.82 REMARK 500 20 ALA A 39 20.12 -146.70 REMARK 500 20 LEU A 42 -33.69 179.29 REMARK 500 20 THR A 60 -62.51 -120.85 REMARK 500 20 VAL A 70 -71.65 -91.07 REMARK 500 20 SER A 74 37.15 -74.41 REMARK 500 20 PRO A 91 43.06 -80.87 REMARK 500 20 GLU A 114 48.74 -84.50 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1O0L A 1 183 UNP Q92843 BCLW_HUMAN 1 183
SEQADV 1O0L GLY A -4 UNP Q92843 CLONING ARTIFACT SEQADV 1O0L PRO A -3 UNP Q92843 CLONING ARTIFACT SEQADV 1O0L LEU A -2 UNP Q92843 CLONING ARTIFACT SEQADV 1O0L GLY A -1 UNP Q92843 CLONING ARTIFACT SEQADV 1O0L SER A 0 UNP Q92843 CLONING ARTIFACT SEQADV 1O0L GLU A 128 UNP Q92843 ALA 128 ENGINEERED
SEQRES 1 A 188 GLY PRO LEU GLY SER MET ALA THR PRO ALA SER ALA PRO SEQRES 2 A 188 ASP THR ARG ALA LEU VAL ALA ASP PHE VAL GLY TYR LYS SEQRES 3 A 188 LEU ARG GLN LYS GLY TYR VAL CYS GLY ALA GLY PRO GLY SEQRES 4 A 188 GLU GLY PRO ALA ALA ASP PRO LEU HIS GLN ALA MET ARG SEQRES 5 A 188 ALA ALA GLY ASP GLU PHE GLU THR ARG PHE ARG ARG THR SEQRES 6 A 188 PHE SER ASP LEU ALA ALA GLN LEU HIS VAL THR PRO GLY SEQRES 7 A 188 SER ALA GLN GLN ARG PHE THR GLN VAL SER ASP GLU LEU SEQRES 8 A 188 PHE GLN GLY GLY PRO ASN TRP GLY ARG LEU VAL ALA PHE SEQRES 9 A 188 PHE VAL PHE GLY ALA ALA LEU CYS ALA GLU SER VAL ASN SEQRES 10 A 188 LYS GLU MET GLU PRO LEU VAL GLY GLN VAL GLN GLU TRP SEQRES 11 A 188 MET VAL GLU TYR LEU GLU THR ARG LEU ALA ASP TRP ILE SEQRES 12 A 188 HIS SER SER GLY GLY TRP ALA GLU PHE THR ALA LEU TYR SEQRES 13 A 188 GLY ASP GLY ALA LEU GLU GLU ALA ARG ARG LEU ARG GLU SEQRES 14 A 188 GLY ASN TRP ALA SER VAL ARG THR VAL LEU THR GLY ALA SEQRES 15 A 188 VAL ALA LEU GLY ALA LEU
HELIX 1 1 ASP A 9 LYS A 25 1 17 HELIX 2 2 GLY A 32 GLY A 36 5 5 HELIX 3 3 LEU A 42 PHE A 57 1 16 HELIX 4 4 THR A 60 LEU A 68 1 9 HELIX 5 5 ALA A 75 PHE A 87 1 13 HELIX 6 6 ASN A 92 ASN A 112 1 21 HELIX 7 7 MET A 115 ARG A 133 1 19 HELIX 8 8 ARG A 133 GLY A 142 1 10 HELIX 9 9 GLY A 143 TYR A 151 1 9 HELIX 10 10 LEU A 156 ARG A 171 1 16
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000