10 20 30 40 50 60 70 80 1NSO - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 28-JAN-03 1NSO
TITLE FOLDED MONOMER OF PROTEASE FROM MASON-PFIZER MONKEY VIRUS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.23.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SIMIAN RETROVIRUS 1; SOURCE 3 ORGANISM_TAXID: 11942; SOURCE 4 GENE: PRT; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID
KEYWDS M-PMV, PROTEASE, VIRUS MATURATION, FOLDED MONOMER, HYDROLASE
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR V.VEVERKA,H.BAUEROVA,A.ZABRANSKY,J.LANG,T.RUML,I.PICHOVA, AUTHOR 2 R.HRABAL
REVDAT 3 24-FEB-09 1NSO 1 VERSN REVDAT 2 18-NOV-03 1NSO 1 JRNL REVDAT 1 18-FEB-03 1NSO 0
JRNL AUTH V.VEVERKA,H.BAUEROVA,A.ZABRANSKY,J.LANG,T.RUML, JRNL AUTH 2 I.PICHOVA,R.HRABAL JRNL TITL THREE-DIMENSIONAL STRUCTURE OF A MONOMERIC FORM OF JRNL TITL 2 A RETROVIRAL PROTEASE JRNL REF J.MOL.BIOL. V. 333 771 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 14568536 JRNL DOI 10.1016/J.JMB.2003.08.049
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.1 REMARK 3 AUTHORS : LINGE, J., O'DONOGHUE, S., NILGES, M. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1NSO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-03. REMARK 100 THE RCSB ID CODE IS RCSB018165.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4.2 REMARK 210 IONIC STRENGTH : 50 MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM PROTEASE U-15N,13C; 50MM REMARK 210 ACETATE BUFFER NA REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY, 4D_13C/ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.1, NMRPIPE 2.1, REMARK 210 SPARKY 3.106, ARIA 1.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 4 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 47 CA LYS A 62 2.02 REMARK 500 O ASP A 47 CB LYS A 62 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 7 153.76 61.38 REMARK 500 1 GLN A 8 90.31 -66.90 REMARK 500 1 ASP A 17 -66.78 67.06 REMARK 500 1 ASP A 18 34.96 -173.52 REMARK 500 1 GLN A 57 93.12 -43.32 REMARK 500 1 SER A 64 163.23 -34.50 REMARK 500 1 LYS A 66 111.77 -33.97 REMARK 500 1 LYS A 73 -27.30 -39.78 REMARK 500 1 ASN A 75 45.04 75.39 REMARK 500 1 ASN A 76 140.68 174.64 REMARK 500 1 SER A 77 -47.11 -168.73 REMARK 500 1 LEU A 88 84.61 68.36 REMARK 500 1 PRO A 89 29.61 -77.25 REMARK 500 1 ASN A 91 90.33 40.61 REMARK 500 1 LYS A 102 49.75 179.04 REMARK 500 1 MET A 105 72.97 -65.40 REMARK 500 2 ALA A 7 -171.19 60.68 REMARK 500 2 ASP A 17 34.30 24.07 REMARK 500 2 ASP A 18 -47.80 167.97 REMARK 500 2 ASP A 30 -36.70 -147.45 REMARK 500 2 LYS A 35 162.94 -46.61 REMARK 500 2 PRO A 40 107.85 -53.50 REMARK 500 2 THR A 46 -179.78 -65.99 REMARK 500 2 ASP A 47 -58.73 148.56 REMARK 500 2 GLN A 57 93.44 -42.81 REMARK 500 2 LYS A 66 119.77 -18.79 REMARK 500 2 LYS A 73 -30.20 -36.69 REMARK 500 2 ASN A 76 144.32 177.88 REMARK 500 2 SER A 77 -45.64 177.53 REMARK 500 2 PRO A 86 48.29 -86.09 REMARK 500 2 ASN A 87 13.67 -144.99 REMARK 500 2 LEU A 88 78.53 66.17 REMARK 500 2 PRO A 89 9.18 -69.20 REMARK 500 2 VAL A 90 -8.01 95.09 REMARK 500 2 ASN A 91 86.53 54.71 REMARK 500 2 LYS A 102 -29.79 -147.10 REMARK 500 2 ILE A 103 -87.41 -76.36 REMARK 500 2 MET A 105 81.61 -62.29 REMARK 500 3 ALA A 7 -178.53 61.74 REMARK 500 3 GLN A 57 94.20 -41.41 REMARK 500 3 SER A 64 154.77 -27.67 REMARK 500 3 LYS A 66 146.22 -31.59 REMARK 500 3 LYS A 73 -33.31 -35.50 REMARK 500 3 SER A 77 -68.06 -174.21 REMARK 500 3 PRO A 86 43.41 -83.75 REMARK 500 3 LEU A 88 86.03 65.69 REMARK 500 3 PRO A 89 27.13 -77.87 REMARK 500 3 MET A 104 -174.82 -63.81 REMARK 500 3 MET A 105 72.73 -67.80 REMARK 500 4 ALA A 7 -162.08 60.51 REMARK 500 4 PRO A 10 60.29 -68.41 REMARK 500 4 ASP A 30 12.56 -156.28 REMARK 500 4 LYS A 35 163.24 -49.80 REMARK 500 4 THR A 46 -179.83 -65.89 REMARK 500 4 ASP A 47 -48.97 173.40 REMARK 500 4 GLN A 57 95.91 -47.37 REMARK 500 4 ASN A 60 -179.90 -68.23 REMARK 500 4 LYS A 66 114.52 -22.98 REMARK 500 4 LYS A 73 -29.13 -38.57 REMARK 500 4 ASN A 76 145.34 -175.45 REMARK 500 4 SER A 77 -43.33 179.98 REMARK 500 4 PRO A 86 35.83 -81.97 REMARK 500 4 LEU A 88 81.40 66.56 REMARK 500 4 PRO A 89 22.23 -77.97 REMARK 500 4 ASN A 91 90.50 44.67 REMARK 500 4 LYS A 102 42.01 -178.07 REMARK 500 4 MET A 105 76.99 -65.67 REMARK 500 5 ALA A 7 130.33 62.77 REMARK 500 5 GLN A 8 90.19 -67.26 REMARK 500 5 ASP A 17 -67.90 63.85 REMARK 500 5 ASP A 18 41.65 -179.52 REMARK 500 5 LYS A 19 148.58 -170.13 REMARK 500 5 THR A 27 -9.98 -54.99 REMARK 500 5 LYS A 35 163.24 -48.02 REMARK 500 5 GLN A 57 90.40 -47.79 REMARK 500 5 SER A 64 164.19 -27.02 REMARK 500 5 LYS A 66 121.63 -22.40 REMARK 500 5 ASN A 75 44.31 76.79 REMARK 500 5 ASN A 76 150.36 173.89 REMARK 500 5 SER A 77 -61.83 -173.11 REMARK 500 5 LEU A 88 79.50 66.49 REMARK 500 5 PRO A 89 23.81 -79.07 REMARK 500 5 ASN A 91 81.09 44.97 REMARK 500 5 LYS A 102 39.29 -169.77 REMARK 500 5 MET A 104 175.55 -52.08 REMARK 500 6 ALA A 7 -163.12 62.68 REMARK 500 6 PRO A 10 48.80 -70.92 REMARK 500 6 ASP A 18 41.17 78.10 REMARK 500 6 ASP A 30 -43.56 -131.92 REMARK 500 6 PRO A 40 109.24 -56.15 REMARK 500 6 GLN A 57 92.49 -44.28 REMARK 500 6 PRO A 61 179.47 -32.33 REMARK 500 6 LYS A 66 111.73 -12.23 REMARK 500 6 ASN A 75 44.52 70.14 REMARK 500 6 ASN A 76 144.35 -176.05 REMARK 500 6 SER A 77 -51.71 176.94 REMARK 500 6 PRO A 86 43.60 -83.09 REMARK 500 6 LEU A 88 81.25 68.18 REMARK 500 6 PRO A 89 21.73 -78.27 REMARK 500 6 LYS A 102 34.96 -177.66 REMARK 500 6 MET A 105 97.22 -62.30 REMARK 500 7 PRO A 4 98.05 -58.61 REMARK 500 7 ALA A 7 -175.40 64.52 REMARK 500 7 PRO A 10 47.63 -82.46 REMARK 500 7 ASP A 30 -46.57 -132.40 REMARK 500 7 THR A 32 102.27 -54.66 REMARK 500 7 THR A 48 93.56 -69.51 REMARK 500 7 GLN A 57 95.93 -46.34 REMARK 500 7 SER A 64 -161.50 -103.42 REMARK 500 7 LYS A 66 100.81 22.36 REMARK 500 7 LYS A 73 -29.75 -38.40 REMARK 500 7 ASN A 76 136.40 -176.60 REMARK 500 7 SER A 77 -47.72 -178.08 REMARK 500 7 LEU A 88 70.92 77.90 REMARK 500 7 PRO A 89 25.32 -72.47 REMARK 500 7 LYS A 102 33.92 -172.28 REMARK 500 7 ILE A 103 -66.14 -107.50 REMARK 500 8 PRO A 4 90.13 -52.91 REMARK 500 8 ALA A 7 169.27 61.25 REMARK 500 8 GLN A 8 90.29 -61.15 REMARK 500 8 PRO A 10 48.43 -84.73 REMARK 500 8 ASP A 17 -74.36 64.01 REMARK 500 8 ASP A 18 37.95 -168.10 REMARK 500 8 ASP A 30 -44.98 -133.07 REMARK 500 8 ASP A 47 -32.54 174.46 REMARK 500 8 GLN A 57 104.44 -56.19 REMARK 500 8 LYS A 66 107.77 -15.74 REMARK 500 8 SER A 77 -75.21 -178.25 REMARK 500 8 PRO A 86 36.52 -81.59 REMARK 500 8 LEU A 88 81.66 77.54 REMARK 500 8 VAL A 90 -3.03 83.03 REMARK 500 8 ASN A 91 77.47 58.45 REMARK 500 8 LYS A 102 51.76 -161.69 REMARK 500 8 ILE A 103 -73.20 -133.15 REMARK 500 9 ALA A 7 127.85 64.27 REMARK 500 9 GLN A 8 99.54 -53.20 REMARK 500 9 PRO A 10 57.29 -68.83 REMARK 500 9 PHE A 21 143.23 -179.02 REMARK 500 9 ASP A 30 11.68 -155.10 REMARK 500 9 LYS A 35 163.08 -46.64 REMARK 500 9 ASP A 47 -63.75 159.80 REMARK 500 9 ILE A 55 27.08 47.56 REMARK 500 9 LYS A 66 137.75 -30.01 REMARK 500 9 LYS A 73 -27.63 -37.75 REMARK 500 9 SER A 77 -83.53 174.76 REMARK 500 9 PRO A 86 48.42 -82.71 REMARK 500 9 LEU A 88 77.66 62.07 REMARK 500 9 PRO A 89 22.86 -74.38 REMARK 500 9 ASN A 91 84.06 47.37 REMARK 500 9 LYS A 102 29.75 -158.87 REMARK 500 9 ILE A 103 -68.34 -101.22 REMARK 500 9 MET A 105 87.34 -58.62 REMARK 500 10 ALA A 7 173.24 64.50 REMARK 500 10 ASP A 17 28.65 46.97 REMARK 500 10 ASP A 18 47.98 74.45 REMARK 500 10 LYS A 35 162.11 -45.59 REMARK 500 10 THR A 46 -179.67 -65.95 REMARK 500 10 ASP A 47 -16.37 174.59 REMARK 500 10 GLN A 57 100.93 -46.78 REMARK 500 10 SER A 64 155.21 -35.94 REMARK 500 10 LYS A 66 130.72 -31.51 REMARK 500 10 LYS A 73 -33.99 -31.17 REMARK 500 10 SER A 77 -74.27 170.65 REMARK 500 10 ASN A 87 11.93 -151.97 REMARK 500 10 LEU A 88 80.87 61.45 REMARK 500 10 PRO A 89 21.18 -76.38 REMARK 500 10 VAL A 90 -1.68 76.37 REMARK 500 10 ASN A 91 84.48 52.60 REMARK 500 10 LYS A 102 45.40 178.75 REMARK 500 10 MET A 105 75.72 -65.92 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1NSO A 1 107 UNP P04024 VPRT_SRV1 163 269
SEQADV 1NSO ALA A 7 UNP P04024 CYS 169 ENGINEERED SEQADV 1NSO ASN A 26 UNP P04024 ASP 188 ENGINEERED SEQADV 1NSO ALA A 106 UNP P04024 CYS 268 ENGINEERED
SEQRES 1 A 107 TRP VAL GLN PRO ILE THR ALA GLN LYS PRO SER LEU THR SEQRES 2 A 107 LEU TRP LEU ASP ASP LYS MET PHE THR GLY LEU ILE ASN SEQRES 3 A 107 THR GLY ALA ASP VAL THR ILE ILE LYS LEU GLU ASP TRP SEQRES 4 A 107 PRO PRO ASN TRP PRO ILE THR ASP THR LEU THR ASN LEU SEQRES 5 A 107 ARG GLY ILE GLY GLN SER ASN ASN PRO LYS GLN SER SER SEQRES 6 A 107 LYS TYR LEU THR TRP ARG ASP LYS GLU ASN ASN SER GLY SEQRES 7 A 107 LEU ILE LYS PRO PHE VAL ILE PRO ASN LEU PRO VAL ASN SEQRES 8 A 107 LEU TRP GLY ARG ASP LEU LEU SER GLN MET LYS ILE MET SEQRES 9 A 107 MET ALA SER
HELIX 1 1 LYS A 35 TRP A 39 5 5 HELIX 2 2 GLY A 94 ILE A 103 1 10
SHEET 1 A 4 LYS A 19 GLY A 23 0 SHEET 2 A 4 LEU A 12 LEU A 16 -1 N LEU A 16 O LYS A 19 SHEET 3 A 4 LEU A 68 ASP A 72 -1 O ARG A 71 N TRP A 15 SHEET 4 A 4 ASN A 76 ILE A 80 -1 O GLY A 78 N TRP A 70 SHEET 1 B 2 LEU A 49 LEU A 52 0 SHEET 2 B 2 GLN A 57 ASN A 60 -1 O ASN A 60 N LEU A 49
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000