10 20 30 40 50 60 70 80 1NDH - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ELECTRON TRANSPORT (FLAVO PROTEIN) 31-OCT-94 1NDH
TITLE CRYSTAL STRUCTURE OF NADH-CYTOCHROME B5 REDUCTASE FROM PIG TITLE 2 LIVER AT 2.4 ANGSTROMS RESOLUTION
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME B5 REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.6.2.2; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823
KEYWDS ELECTRON TRANSPORT (FLAVO PROTEIN)
EXPDTA X-RAY DIFFRACTION
AUTHOR H.NISHIDA,K.MIKI
REVDAT 2 24-FEB-09 1NDH 1 VERSN REVDAT 1 14-FEB-95 1NDH 0
JRNL AUTH H.NISHIDA,K.INAKA,M.YAMANAKA,S.KAIDA,K.KOBAYASHI, JRNL AUTH 2 K.MIKI JRNL TITL CRYSTAL STRUCTURE OF NADH-CYTOCHROME B5 REDUCTASE JRNL TITL 2 FROM PIG LIVER AT 2.4 A RESOLUTION. JRNL REF BIOCHEMISTRY V. 34 2763 1995 JRNL REFN ISSN 0006-2960 JRNL PMID 7893687 JRNL DOI 10.1021/BI00009A004
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.NISHIDA,K.INAKA,K.MIKI REMARK 1 TITL THE SPECIFIC ARRANGEMENT OF THREE AMINO ACIDIC REMARK 1 TITL 2 RESIDUES FOR FLAVIN BINDING BARREL STRUCTURES IN REMARK 1 TITL 3 NADH-CYTOCHROME B5 REDUCTASE AND THE OTHER FLAVIN REMARK 1 TITL 4 DEPENDENT REDUCTASES REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN
REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ, X-PLOR REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 5.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 15457 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2158 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 53 REMARK 3 SOLVENT ATOMS : 48 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1NDH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.45000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.45000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.55000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 24.45000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.45000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.55000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 THR A 2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 191 N LEU A 193 2.06 REMARK 500 O THR A 142 N LYS A 144 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 115 C PRO A 116 N 0.117 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 23 CB - CA - C ANGL. DEV. = 12.6 DEGREES REMARK 500 ASN A 25 CA - CB - CG ANGL. DEV. = -20.7 DEGREES REMARK 500 THR A 28 N - CA - CB ANGL. DEV. = -14.4 DEGREES REMARK 500 ARG A 32 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 32 NE - CZ - NH2 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 55 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A 55 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 ASP A 57 CB - CA - C ANGL. DEV. = 12.1 DEGREES REMARK 500 ASP A 57 OD1 - CG - OD2 ANGL. DEV. = -11.8 DEGREES REMARK 500 ASP A 57 CB - CG - OD2 ANGL. DEV. = 8.9 DEGREES REMARK 500 VAL A 61 CB - CA - C ANGL. DEV. = 11.4 DEGREES REMARK 500 LEU A 60 O - C - N ANGL. DEV. = 11.8 DEGREES REMARK 500 VAL A 68 CG1 - CB - CG2 ANGL. DEV. = 9.9 DEGREES REMARK 500 ASP A 71 CB - CG - OD1 ANGL. DEV. = 8.2 DEGREES REMARK 500 VAL A 77 CA - CB - CG1 ANGL. DEV. = 11.6 DEGREES REMARK 500 VAL A 77 C - N - CA ANGL. DEV. = 19.1 DEGREES REMARK 500 ASP A 78 CA - CB - CG ANGL. DEV. = -14.2 DEGREES REMARK 500 ASP A 78 CA - C - O ANGL. DEV. = 14.5 DEGREES REMARK 500 ASP A 78 C - N - CA ANGL. DEV. = 21.5 DEGREES REMARK 500 ASP A 78 CA - C - N ANGL. DEV. = -16.3 DEGREES REMARK 500 VAL A 80 CA - CB - CG1 ANGL. DEV. = 11.2 DEGREES REMARK 500 PRO A 90 O - C - N ANGL. DEV. = 12.4 DEGREES REMARK 500 PHE A 92 CB - CA - C ANGL. DEV. = 15.7 DEGREES REMARK 500 PHE A 92 C - N - CA ANGL. DEV. = 15.2 DEGREES REMARK 500 GLU A 103 CA - CB - CG ANGL. DEV. = 13.5 DEGREES REMARK 500 GLU A 112 OE1 - CD - OE2 ANGL. DEV. = 7.5 DEGREES REMARK 500 ARG A 114 CD - NE - CZ ANGL. DEV. = 8.6 DEGREES REMARK 500 ARG A 114 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 TYR A 122 CB - CG - CD2 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 131 NE - CZ - NH2 ANGL. DEV. = -6.5 DEGREES REMARK 500 VAL A 139 CB - CA - C ANGL. DEV. = 13.6 DEGREES REMARK 500 VAL A 139 N - CA - C ANGL. DEV. = -17.5 DEGREES REMARK 500 VAL A 139 O - C - N ANGL. DEV. = 10.2 DEGREES REMARK 500 THR A 142 N - CA - CB ANGL. DEV. = 13.1 DEGREES REMARK 500 THR A 142 C - N - CA ANGL. DEV. = 17.7 DEGREES REMARK 500 VAL A 143 C - N - CA ANGL. DEV. = 16.9 DEGREES REMARK 500 LYS A 144 CA - CB - CG ANGL. DEV. = 13.6 DEGREES REMARK 500 LYS A 144 CA - C - O ANGL. DEV. = -16.0 DEGREES REMARK 500 LYS A 144 C - N - CA ANGL. DEV. = 15.5 DEGREES REMARK 500 THR A 156 N - CA - CB ANGL. DEV. = -13.3 DEGREES REMARK 500 ARG A 163 NH1 - CZ - NH2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG A 163 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 168 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 186 N - CA - CB ANGL. DEV. = 15.2 DEGREES REMARK 500 ASP A 186 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 LEU A 188 CB - CA - C ANGL. DEV. = -14.6 DEGREES REMARK 500 PRO A 191 O - C - N ANGL. DEV. = 16.3 DEGREES REMARK 500 GLU A 192 CA - C - N ANGL. DEV. = -17.4 DEGREES REMARK 500 GLU A 192 O - C - N ANGL. DEV. = 15.3 DEGREES REMARK 500 GLU A 195 CB - CA - C ANGL. DEV. = 17.3 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 78 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 7 68.17 -66.52 REMARK 500 ASN A 25 31.50 88.94 REMARK 500 ASP A 27 12.01 150.47 REMARK 500 PHE A 76 -13.59 -153.99 REMARK 500 VAL A 77 8.95 -3.85 REMARK 500 HIS A 89 -158.25 -110.19 REMARK 500 PHE A 92 126.37 10.05 REMARK 500 PRO A 93 -75.09 -10.13 REMARK 500 PRO A 132 -75.73 -91.41 REMARK 500 LYS A 134 121.75 -179.58 REMARK 500 LYS A 135 123.87 91.99 REMARK 500 VAL A 139 61.70 -114.68 REMARK 500 THR A 142 -39.92 161.46 REMARK 500 VAL A 143 -31.83 17.03 REMARK 500 GLU A 192 53.58 -30.41 REMARK 500 HIS A 200 38.64 -144.36 REMARK 500 TYR A 219 -137.66 -107.64 REMARK 500 VAL A 224 -37.46 -22.05 REMARK 500 ASN A 225 -72.33 42.31 REMARK 500 GLU A 226 -30.53 145.11 REMARK 500 CYS A 245 -51.54 -25.61 REMARK 500 PRO A 248 -36.14 -36.90 REMARK 500 PRO A 249 132.94 -34.42 REMARK 500 MET A 250 54.06 13.68 REMARK 500 ILE A 251 49.65 6.83 REMARK 500 TYR A 253 -13.67 108.93 REMARK 500 ALA A 254 -125.02 92.18 REMARK 500 CYS A 255 -149.83 -83.19 REMARK 500 REMARK 500 REMARK: NULL
REMARK 700 REMARK 700 SHEET REMARK 700 SHEET REMARK 700 SHEET_ID: S1, BETA-BARREL.
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 273
DBREF 1NDH A 1 272 UNP P83686 NCB5R_PIG 29 300
SEQADV 1NDH VAL A 24 UNP P83686 ILE 52 CONFLICT SEQADV 1NDH ASN A 25 UNP P83686 SER 53 CONFLICT SEQADV 1NDH SER A 137 UNP P83686 ASP 165 CONFLICT SEQADV 1NDH ARG A 212 UNP P83686 LYS 240 CONFLICT SEQADV 1NDH GLU A 260 UNP P83686 ASP 288 CONFLICT
SEQRES 1 A 272 SER THR PRO ALA ILE THR LEU GLU ASN PRO ASP ILE LYS SEQRES 2 A 272 TYR PRO LEU ARG LEU ILE ASP LYS GLU VAL VAL ASN HIS SEQRES 3 A 272 ASP THR ARG ARG PHE ARG PHE ALA LEU PRO SER PRO GLU SEQRES 4 A 272 HIS ILE LEU GLY LEU PRO VAL GLY GLN HIS ILE TYR LEU SEQRES 5 A 272 SER ALA ARG ILE ASP GLY ASN LEU VAL ILE ARG PRO TYR SEQRES 6 A 272 THR PRO VAL SER SER ASP ASP ASP LYS GLY PHE VAL ASP SEQRES 7 A 272 LEU VAL ILE LYS VAL TYR PHE LYS ASP THR HIS PRO LYS SEQRES 8 A 272 PHE PRO ALA GLY GLY LYS MET SER GLN TYR LEU GLU SER SEQRES 9 A 272 MET LYS ILE GLY ASP THR ILE GLU PHE ARG GLY PRO ASN SEQRES 10 A 272 GLY LEU LEU VAL TYR GLN GLY LYS GLY LYS PHE ALA ILE SEQRES 11 A 272 ARG PRO ASP LYS LYS SER SER PRO VAL ILE LYS THR VAL SEQRES 12 A 272 LYS SER VAL GLY MET ILE ALA GLY GLY THR GLY ILE THR SEQRES 13 A 272 PRO MET LEU GLN VAL ILE ARG ALA ILE MET LYS ASP PRO SEQRES 14 A 272 ASP ASP HIS THR VAL CYS HIS LEU LEU PHE ALA ASN GLN SEQRES 15 A 272 THR GLU LYS ASP ILE LEU LEU ARG PRO GLU LEU GLU GLU SEQRES 16 A 272 LEU ARG ASN GLU HIS SER ALA ARG PHE LYS LEU TRP TYR SEQRES 17 A 272 THR VAL ASP ARG ALA PRO GLU ALA TRP ASP TYR SER GLN SEQRES 18 A 272 GLY PHE VAL ASN GLU GLU MET ILE ARG ASP HIS LEU PRO SEQRES 19 A 272 PRO PRO GLU GLU GLU PRO LEU VAL LEU MET CYS GLY PRO SEQRES 20 A 272 PRO PRO MET ILE GLN TYR ALA CYS LEU PRO ASN LEU GLU SEQRES 21 A 272 ARG VAL GLY HIS PRO LYS GLU ARG CYS PHE ALA PHE
HET FAD A 273 53
HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE
FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 HOH *48(H2 O)
HELIX 1 A LYS A 97 SER A 104 1 8 HELIX 2 B ILE A 155 LYS A 167 1 13 HELIX 3 C ARG A 190 GLU A 194 3 5 HELIX 4 D ARG A 197 HIS A 200 1 4 HELIX 5 E GLU A 227 HIS A 232 1 6 HELIX 6 F PRO A 257 ARG A 261 1 5
SHEET 1 S1 7 LYS A 13 VAL A 23 0 SHEET 2 S1 7 THR A 28 PHE A 33 -1 SHEET 3 S1 7 LEU A 79 VAL A 83 -1 SHEET 4 S1 7 ASN A 59 TYR A 65 -1 SHEET 5 S1 7 THR A 110 ASN A 117 -1 SHEET 6 S1 7 LYS A 13 VAL A 23 -1 SHEET 1 S2 3 LEU A 120 GLY A 124 0 SHEET 2 S2 3 LYS A 127 ILE A 130 -1 SHEET 3 S2 3 SER A 137 VAL A 139 -1 SHEET 1 S3 4 PHE A 204 ARG A 212 0 SHEET 2 S3 4 SER A 145 GLY A 151 1 SHEET 3 S3 4 LEU A 241 LEU A 243 1
CISPEP 1 GLY A 115 PRO A 116 0 -7.73
SITE 1 AC1 21 ARG A 63 PRO A 64 TYR A 65 THR A 66 SITE 2 AC1 21 ILE A 81 LYS A 82 VAL A 83 PHE A 85 SITE 3 AC1 21 LYS A 86 LYS A 91 GLY A 95 GLY A 96 SITE 4 AC1 21 LYS A 97 MET A 98 SER A 99 THR A 153 SITE 5 AC1 21 THR A 156 HOH A 276 HOH A 277 HOH A 279 SITE 6 AC1 21 HOH A 284
CRYST1 86.900 73.100 48.900 90.00 90.00 90.00 P 21 21 21 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011507 0.000000 0.000000 0.00000
SCALE2 0.000000 0.013680 0.000000 0.00000
SCALE3 0.000000 0.000000 0.020450 0.00000