10 20 30 40 50 60 70 80 1NCA - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE(O-GLYCOSYL) 21-JAN-92 1NCA
TITLE REFINED CRYSTAL STRUCTURE OF THE INFLUENZA VIRUS N9 NEURAMINIDASE-NC41 TITLE 2 FAB COMPLEX
COMPND MOL_ID: 1; COMPND 2 MOLECULE: INFLUENZA A SUBTYPE N9 NEURAMINIDASE; COMPND 3 CHAIN: N; COMPND 4 EC: 3.2.1.18; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: IGG2A-KAPPA NC41 FAB (LIGHT CHAIN); COMPND 7 CHAIN: L; COMPND 8 MOL_ID: 3; COMPND 9 MOLECULE: IGG2A-KAPPA NC41 FAB (HEAVY CHAIN); COMPND 10 CHAIN: H
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 384509; SOURCE 4 STRAIN: (A/TERN/AUSTRALIA/G70C/1975(H11N9)); SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 8 ORGANISM_TAXID: 10090; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 12 ORGANISM_TAXID: 10090
KEYWDS HYDROLASE(O-GLYCOSYL)
EXPDTA X-RAY DIFFRACTION
AUTHOR W.R.TULIP,J.N.VARGHESE,P.M.COLMAN
REVDAT 3 13-JUL-11 1NCA 1 VERSN REVDAT 2 24-FEB-09 1NCA 1 VERSN REVDAT 1 31-JAN-94 1NCA 0
JRNL AUTH W.R.TULIP,J.N.VARGHESE,W.G.LAVER,R.G.WEBSTER,P.M.COLMAN JRNL TITL REFINED CRYSTAL STRUCTURE OF THE INFLUENZA VIRUS N9 JRNL TITL 2 NEURAMINIDASE-NC41 FAB COMPLEX. JRNL REF J.MOL.BIOL. V. 227 122 1992 JRNL REFN ISSN 0022-2836 JRNL PMID 1381757 JRNL DOI 10.1016/0022-2836(92)90687-F
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.R.TULIP,J.N.VARGHESE,R.G.WEBSTER,W.G.LAVER,P.M.COLMAN REMARK 1 TITL CRYSTAL STRUCTURES OF TWO MUTANT NEURAMINIDASE-ANTIBODY REMARK 1 TITL 2 COMPLEXES WITH AMINO ACID SUBSTITUTIONS IN THE INTERFACE REMARK 1 REF J.MOL.BIOL. V. 227 149 1992 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH W.R.TULIP,J.N.VARGHESE,R.G.WEBSTER,G.M.AIR,W.G.LAVER, REMARK 1 AUTH 2 P.M.COLMAN REMARK 1 TITL CRYSTAL STRUCTURES OF NEURAMINIDASE-ANTIBODY COMPLEXES REMARK 1 REF COLD SPRING HARBOR V. 54 257 1989 REMARK 1 REF 2 SYMP.QUANT.BIOL. REMARK 1 REFN ISSN 0091-7451 REMARK 1 REFERENCE 3 REMARK 1 AUTH P.M.COLMAN,W.G.LAVER,J.N.VARGHESE,A.T.BAKER,P.A.TULLOCH, REMARK 1 AUTH 2 G.M.AIR,R.G.WEBSTER REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF A COMPLEX OF ANTIBODY WITH REMARK 1 TITL 2 INFLUENZA VIRUS NEURAMINIDASE REMARK 1 REF NATURE V. 326 358 1987 REMARK 1 REFN ISSN 0028-0836
REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 31846 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6404 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 101 REMARK 3 SOLVENT ATOMS : 72 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.016 REMARK 3 BOND ANGLES (DEGREES) : 3.60 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE COORDINATES OF THE CALCIUM ATOM ARE REMARK 3 NOT WELL DETERMINED. THE REFERENCE STRUCTURE FOR THE CALCIUM ATOM REMARK 3 IS THE N9 MUTANT S370L (PDB ENTRY 2NN9).
REMARK 4 REMARK 4 1NCA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 83.50000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 83.50000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 83.50000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 83.50000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 83.50000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 83.50000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 83.50000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 83.50000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE COORDINATES OF THE CARBOHYDRATE IN THE EPITOPE CAN BE REMARK 300 GENERATED FORM THE COORDINATES OF RESIDUES C 200A-C 200F BY REMARK 300 APPLYING THE FOLLOWING TRANSFORMATION: REMARK 300 REMARK 300 0.0 1.0 0.0 83.5 REMARK 300 -1.0 0.0 0.0 83.5 REMARK 300 0.0 0.0 1.0 0.0
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: N, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 167.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 83.50000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 -83.50000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 83.50000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 83.50000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: EICOSAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 42910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 120040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: N, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 167.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 83.50000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 -83.50000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 83.50000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 83.50000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: N, H, L REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 83.50000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 -83.50000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 248.00000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 83.50000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 83.50000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 248.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 248.00000 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 167.00000 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 248.00000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS N 98 NE2 HIS N 98 CD2 -0.068 REMARK 500 HIS N 144 NE2 HIS N 144 CD2 -0.082 REMARK 500 HIS N 233 NE2 HIS N 233 CD2 -0.073 REMARK 500 HIS N 274 NE2 HIS N 274 CD2 -0.071 REMARK 500 HIS N 312 NE2 HIS N 312 CD2 -0.078 REMARK 500 HIS L 189 NE2 HIS L 189 CD2 -0.066 REMARK 500 HIS L 198 NE2 HIS L 198 CD2 -0.074 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP N 97 CD1 - CG - CD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP N 97 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG N 107 CA - CB - CG ANGL. DEV. = 15.1 DEGREES REMARK 500 ARG N 107 CB - CG - CD ANGL. DEV. = -27.0 DEGREES REMARK 500 ARG N 107 CG - CD - NE ANGL. DEV. = 16.5 DEGREES REMARK 500 ARG N 107 CD - NE - CZ ANGL. DEV. = -20.9 DEGREES REMARK 500 ARG N 107 NH1 - CZ - NH2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG N 118 CD - NE - CZ ANGL. DEV. = -9.2 DEGREES REMARK 500 ARG N 118 NE - CZ - NH2 ANGL. DEV. = -7.0 DEGREES REMARK 500 ARG N 130 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG N 152 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 TRP N 161 CD1 - CG - CD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 TRP N 161 CB - CG - CD1 ANGL. DEV. = -8.1 DEGREES REMARK 500 TRP N 161 CE2 - CD2 - CG ANGL. DEV. = -6.3 DEGREES REMARK 500 TRP N 161 CG - CD2 - CE3 ANGL. DEV. = 7.6 DEGREES REMARK 500 TYR N 169A CB - CG - CD1 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG N 172 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG N 172 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 TRP N 178 CD1 - CG - CD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP N 178 CE2 - CD2 - CG ANGL. DEV. = -6.2 DEGREES REMARK 500 TRP N 218 CD1 - CG - CD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 TRP N 218 CE2 - CD2 - CG ANGL. DEV. = -5.3 DEGREES REMARK 500 VAL N 239 CG1 - CB - CG2 ANGL. DEV. = -12.4 DEGREES REMARK 500 THR N 247 N - CA - CB ANGL. DEV. = -11.9 DEGREES REMARK 500 LYS N 264 CA - CB - CG ANGL. DEV. = 17.8 DEGREES REMARK 500 TRP N 265 CD1 - CG - CD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 TRP N 265 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG N 284 CB - CG - CD ANGL. DEV. = -21.2 DEGREES REMARK 500 TRP N 295 CD1 - CG - CD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 GLY N 297 CA - C - N ANGL. DEV. = -15.3 DEGREES REMARK 500 GLY N 297 O - C - N ANGL. DEV. = 11.2 DEGREES REMARK 500 ARG N 300 CD - NE - CZ ANGL. DEV. = -9.7 DEGREES REMARK 500 ARG N 300 NE - CZ - NH1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ARG N 300 NE - CZ - NH2 ANGL. DEV. = -7.8 DEGREES REMARK 500 TRP N 361 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP N 361 CB - CG - CD1 ANGL. DEV. = -8.6 DEGREES REMARK 500 TRP N 361 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 TRP N 361 CG - CD2 - CE3 ANGL. DEV. = 7.1 DEGREES REMARK 500 TRP N 403 CD1 - CG - CD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 TRP N 403 CE2 - CD2 - CG ANGL. DEV. = -6.2 DEGREES REMARK 500 TRP N 403 CG - CD2 - CE3 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP N 412 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 TYR N 412A CB - CG - CD1 ANGL. DEV. = -4.9 DEGREES REMARK 500 TRP N 412B CD1 - CG - CD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 TRP N 412B CE2 - CD2 - CG ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG N 428 CG - CD - NE ANGL. DEV. = 14.8 DEGREES REMARK 500 ARG N 428 CD - NE - CZ ANGL. DEV. = -11.7 DEGREES REMARK 500 ARG N 428 NE - CZ - NH1 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG N 428 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG N 430 NE - CZ - NH2 ANGL. DEV. = -6.3 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 95 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER N 96 -179.52 176.14 REMARK 500 THR N 188 -159.45 -144.71 REMARK 500 ASN N 200 48.37 -157.90 REMARK 500 VAL N 212 -60.32 -99.16 REMARK 500 ILE N 222 79.42 44.44 REMARK 500 CYS N 291 -163.51 -122.02 REMARK 500 PRO N 331 -153.64 -76.66 REMARK 500 ASN N 359 42.21 -82.74 REMARK 500 SER N 404 -138.51 -123.95 REMARK 500 GLU N 433 67.45 -113.51 REMARK 500 ILE N 464 -6.73 -54.38 REMARK 500 PRO L 8 171.83 -59.45 REMARK 500 ALA L 51 -25.97 61.59 REMARK 500 ALA L 84 175.79 177.53 REMARK 500 ASP L 151 45.86 36.23 REMARK 500 ASN L 190 -44.83 -137.58 REMARK 500 LYS L 199 -35.95 -35.83 REMARK 500 THR L 200 -2.85 -59.82 REMARK 500 ASN L 210 126.93 -173.15 REMARK 500 PHE H 29 -46.32 -29.29 REMARK 500 PRO H 41 -57.92 -15.29 REMARK 500 LYS H 43 -19.87 -35.28 REMARK 500 THR H 52A 3.60 -64.51 REMARK 500 ASN H 53 -62.73 -96.29 REMARK 500 ALA H 88 -175.94 173.02 REMARK 500 PHE H 99 -20.65 92.29 REMARK 500 TYR H 102 99.87 54.91 REMARK 500 CYS H 128 -117.20 24.39 REMARK 500 ASP H 130 100.12 -40.05 REMARK 500 THR H 134 153.52 80.36 REMARK 500 ASN H 162 71.88 56.27 REMARK 500 SER H 163 18.20 55.84 REMARK 500 SER H 180 -81.05 64.20 REMARK 500 ARG H 226 57.27 14.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG N 107 0.23 SIDE CHAIN REMARK 500 ARG N 118 0.16 SIDE CHAIN REMARK 500 ARG N 172 0.11 SIDE CHAIN REMARK 500 ARG N 209 0.07 SIDE CHAIN REMARK 500 ARG N 224 0.08 SIDE CHAIN REMARK 500 ARG N 300 0.21 SIDE CHAIN REMARK 500 ARG N 428 0.14 SIDE CHAIN REMARK 500 ARG L 61 0.14 SIDE CHAIN REMARK 500 ARG L 108 0.16 SIDE CHAIN REMARK 500 TYR L 140 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 THR N 247 46.4 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH N 68 DISTANCE = 5.17 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA N 1 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN N 347 O REMARK 620 2 ASP N 324 OD2 105.4 REMARK 620 3 GLY N 297 O 141.8 110.4 REMARK 620 4 ASP N 293 O 81.4 106.0 100.9 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG N 469A REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG N 470B REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BMA N 471C REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN N 472D REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN N 473E REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN N 474F REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG N 475A REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG N 476A REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA N 1
DBREF 1NCA N 81 468 UNP P03472 NRAM_IATRA 82 470 DBREF 1NCA L 1 214 EMBL Y11589 CAA72328 1 214 DBREF 1NCA H 114 227 UNP P01865 GCAM_MOUSE 1 101
SEQADV 1NCA THR L 20 EMBL Y11589 SER 20 CONFLICT SEQADV 1NCA ILE L 21 EMBL Y11589 VAL 21 CONFLICT SEQADV 1NCA ASP L 28 EMBL Y11589 ILE 28 CONFLICT SEQADV 1NCA SER L 30 EMBL Y11589 GLY 30 CONFLICT SEQADV 1NCA ALA L 32 EMBL Y11589 ASN 32 CONFLICT SEQADV 1NCA VAL L 34 EMBL Y11589 ALA 34 CONFLICT SEQADV 1NCA LEU L 46 EMBL Y11589 ALA 46 CONFLICT SEQADV 1NCA TRP L 50 EMBL Y11589 SER 50 CONFLICT SEQADV 1NCA THR L 53 EMBL Y11589 TYR 53 CONFLICT SEQADV 1NCA HIS L 55 EMBL Y11589 TYR 55 CONFLICT SEQADV 1NCA ILE L 56 EMBL Y11589 SER 56 CONFLICT SEQADV 1NCA ALA L 63 EMBL Y11589 THR 63 CONFLICT SEQADV 1NCA TYR L 71 EMBL Y11589 PHE 71 CONFLICT SEQADV 1NCA SER L 77 EMBL Y11589 ASN 77 CONFLICT SEQADV 1NCA ALA L 80 EMBL Y11589 SER 80 CONFLICT SEQADV 1NCA LEU L 85 EMBL Y11589 GLU 85 CONFLICT SEQADV 1NCA TYR L 87 EMBL Y11589 PHE 87 CONFLICT SEQADV 1NCA HIS L 91 EMBL Y11589 TYR 91 CONFLICT SEQADV 1NCA TYR L 92 EMBL Y11589 ASN 92 CONFLICT SEQADV 1NCA SER L 93 EMBL Y11589 ARG 93 CONFLICT SEQADV 1NCA PRO L 94 EMBL Y11589 TYR 94 CONFLICT
SEQRES 1 N 389 ILE ARG ASP PHE ASN ASN LEU THR LYS GLY LEU CYS THR SEQRES 2 N 389 ILE ASN SER TRP HIS ILE TYR GLY LYS ASP ASN ALA VAL SEQRES 3 N 389 ARG ILE GLY GLU ASP SER ASP VAL LEU VAL THR ARG GLU SEQRES 4 N 389 PRO TYR VAL SER CYS ASP PRO ASP GLU CYS ARG PHE TYR SEQRES 5 N 389 ALA LEU SER GLN GLY THR THR ILE ARG GLY LYS HIS SER SEQRES 6 N 389 ASN GLY THR ILE HIS ASP ARG SER GLN TYR ARG ALA LEU SEQRES 7 N 389 ILE SER TRP PRO LEU SER SER PRO PRO THR VAL TYR ASN SEQRES 8 N 389 SER ARG VAL GLU CYS ILE GLY TRP SER SER THR SER CYS SEQRES 9 N 389 HIS ASP GLY LYS THR ARG MET SER ILE CYS ILE SER GLY SEQRES 10 N 389 PRO ASN ASN ASN ALA SER ALA VAL ILE TRP TYR ASN ARG SEQRES 11 N 389 ARG PRO VAL THR GLU ILE ASN THR TRP ALA ARG ASN ILE SEQRES 12 N 389 LEU ARG THR GLN GLU SER GLU CYS VAL CYS HIS ASN GLY SEQRES 13 N 389 VAL CYS PRO VAL VAL PHE THR ASP GLY SER ALA THR GLY SEQRES 14 N 389 PRO ALA GLU THR ARG ILE TYR TYR PHE LYS GLU GLY LYS SEQRES 15 N 389 ILE LEU LYS TRP GLU PRO LEU ALA GLY THR ALA LYS HIS SEQRES 16 N 389 ILE GLU GLU CYS SER CYS TYR GLY GLU ARG ALA GLU ILE SEQRES 17 N 389 THR CYS THR CYS ARG ASP ASN TRP GLN GLY SER ASN ARG SEQRES 18 N 389 PRO VAL ILE ARG ILE ASP PRO VAL ALA MET THR HIS THR SEQRES 19 N 389 SER GLN TYR ILE CYS SER PRO VAL LEU THR ASP ASN PRO SEQRES 20 N 389 ARG PRO ASN ASP PRO THR VAL GLY LYS CYS ASN ASP PRO SEQRES 21 N 389 TYR PRO GLY ASN ASN ASN ASN GLY VAL LYS GLY PHE SER SEQRES 22 N 389 TYR LEU ASP GLY VAL ASN THR TRP LEU GLY ARG THR ILE SEQRES 23 N 389 SER ILE ALA SER ARG SER GLY TYR GLU MET LEU LYS VAL SEQRES 24 N 389 PRO ASN ALA LEU THR ASP ASP LYS SER LYS PRO THR GLN SEQRES 25 N 389 GLY GLN THR ILE VAL LEU ASN THR ASP TRP SER GLY TYR SEQRES 26 N 389 SER GLY SER PHE MET ASP TYR TRP ALA GLU GLY GLU CYS SEQRES 27 N 389 TYR ARG ALA CYS PHE TYR VAL GLU LEU ILE ARG GLY ARG SEQRES 28 N 389 PRO LYS GLU ASP LYS VAL TRP TRP THR SER ASN SER ILE SEQRES 29 N 389 VAL SER MET CYS SER SER THR GLU PHE LEU GLY GLN TRP SEQRES 30 N 389 ASP TRP PRO ASP GLY ALA LYS ILE GLU TYR PHE LEU SEQRES 1 L 214 ASP ILE VAL MET THR GLN SER PRO LYS PHE MET SER THR SEQRES 2 L 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS LYS ALA SER SEQRES 3 L 214 GLN ASP VAL SER THR ALA VAL VAL TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY GLN SER PRO LYS LEU LEU ILE TYR TRP ALA SER SEQRES 5 L 214 THR ARG HIS ILE GLY VAL PRO ASP ARG PHE ALA GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP TYR THR LEU THR ILE SER SER VAL SEQRES 7 L 214 GLN ALA GLU ASP LEU ALA LEU TYR TYR CYS GLN GLN HIS SEQRES 8 L 214 TYR SER PRO PRO TRP THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 L 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 L 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 L 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 L 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 L 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 L 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 L 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 L 214 PHE ASN ARG ASN GLU CYS SEQRES 1 H 221 GLN ILE GLN LEU VAL GLN SER GLY PRO GLU LEU LYS LYS SEQRES 2 H 221 PRO GLY GLU THR VAL LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 H 221 TYR THR PHE THR ASN TYR GLY MET ASN TRP VAL LYS GLN SEQRES 4 H 221 ALA PRO GLY LYS GLY LEU LYS TRP MET GLY TRP ILE ASN SEQRES 5 H 221 THR ASN THR GLY GLU PRO THR TYR GLY GLU GLU PHE LYS SEQRES 6 H 221 GLY ARG PHE ALA PHE SER LEU GLU THR SER ALA SER THR SEQRES 7 H 221 ALA ASN LEU GLN ILE ASN ASN LEU LYS ASN GLU ASP THR SEQRES 8 H 221 ALA THR PHE PHE CYS ALA ARG GLY GLU ASP ASN PHE GLY SEQRES 9 H 221 SER LEU SER ASP TYR TRP GLY GLN GLY THR THR VAL THR SEQRES 10 H 221 VAL SER SER ALA LYS THR THR ALA PRO SER VAL TYR PRO SEQRES 11 H 221 LEU ALA PRO VAL CYS GLY ASP THR THR GLY SER SER VAL SEQRES 12 H 221 THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO SEQRES 13 H 221 VAL THR LEU THR TRP ASN SER GLY SER LEU SER SER GLY SEQRES 14 H 221 VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR SEQRES 15 H 221 THR LEU SER SER SER VAL THR VAL THR SER SER THR TRP SEQRES 16 H 221 PRO SER GLN SER ILE THR CYS ASN VAL ALA HIS PRO ALA SEQRES 17 H 221 SER SER THR LYS VAL ASP LYS LYS ILE GLU PRO ARG GLY
MODRES 1NCA ASN N 86 ASN GLYCOSYLATION SITE MODRES 1NCA ASN N 146 ASN GLYCOSYLATION SITE MODRES 1NCA ASN N 200 ASN GLYCOSYLATION SITE
HET NAG N 469A 14 HET NAG N 470B 14 HET BMA N 471C 11 HET MAN N 472D 11 HET MAN N 473E 11 HET MAN N 474F 11 HET NAG N 475A 14 HET NAG N 476A 14 HET CA N 1 1
HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM BMA BETA-D-MANNOSE HETNAM MAN ALPHA-D-MANNOSE HETNAM CA CALCIUM ION
FORMUL 4 NAG 4(C8 H15 N O6) FORMUL 4 BMA C6 H12 O6 FORMUL 4 MAN 3(C6 H12 O6) FORMUL 7 CA CA 2+ FORMUL 8 HOH *72(H2 O)
HELIX 1 H1 ASN N 104 ASP N 111 1 8 HELIX 2 H2 GLY N 142 ASN N 146 1 5 HELIX 3 H3 ASN N 381 ASP N 385 1 5 HELIX 4 H4 LYS N 463 LEU N 468 1 6
SHEET 1 A 4 SER N 96 LYS N 102 0 SHEET 2 A 4 THR N 439 SER N 449 -1 O SER N 445 N TYR N 100 SHEET 3 A 4 ALA N 420 GLY N 429 -1 O ALA N 420 N SER N 448 SHEET 4 A 4 SER N 407 MET N 411 -1 O GLY N 408 N TYR N 423 SHEET 1 B 4 LEU N 115 CYS N 124 0 SHEET 2 B 4 CYS N 129 THR N 139 -1 N ARG N 130 O SER N 123 SHEET 3 B 4 ALA N 157 PRO N 162 -1 O ALA N 157 N SER N 135 SHEET 4 B 4 ARG N 172 ILE N 176 -1 N ARG N 172 O SER N 160 SHEET 1 C 4 SER N 179 HIS N 184 0 SHEET 2 C 4 ARG N 189 SER N 195 -1 N MET N 190 O CYS N 183 SHEET 3 C 4 SER N 202 TYR N 207 -1 O SER N 202 N SER N 195 SHEET 4 C 4 ARG N 210 ASN N 216 -1 O ARG N 210 N TYR N 207 SHEET 1 D 4 ARG N 224 THR N 225 0 SHEET 2 D 4 VAL N 236 GLY N 244 -1 O THR N 242 N ARG N 224 SHEET 3 D 4 ALA N 250 LYS N 258 -1 N GLU N 251 O ASP N 243 SHEET 4 D 4 LYS N 261 PRO N 267 -1 N LYS N 261 O LYS N 258 SHEET 1 E 4 SER N 279 GLU N 283 0 SHEET 2 E 4 GLU N 286 THR N 290 -1 N GLU N 286 O GLU N 283 SHEET 3 E 4 PRO N 301 ASP N 306 -1 O ILE N 303 N CYS N 289 SHEET 4 E 4 THR N 311 TYR N 316 -1 O THR N 311 N ASP N 306 SHEET 1 F 4 SER N 353 TYR N 354 0 SHEET 2 F 4 TRP N 361 ARG N 364 -1 N TRP N 361 O TYR N 354 SHEET 3 F 4 SER N 372 LYS N 378 -1 N GLU N 375 O ARG N 364 SHEET 4 F 4 GLN N 392 TRP N 403 -1 O GLN N 392 N LYS N 378 SHEET 1 G 4 MET L 4 GLN L 6 0 SHEET 2 G 4 VAL L 19 ALA L 25 -1 O LYS L 24 N THR L 5 SHEET 3 G 4 ASP L 70 ILE L 75 -1 N TYR L 71 O CYS L 23 SHEET 4 G 4 PHE L 62 SER L 67 -1 O ALA L 63 N THR L 74 SHEET 1 H 6 PHE L 10 THR L 13 0 SHEET 2 H 6 THR L 102 ILE L 106 1 O LYS L 103 N MET L 11 SHEET 3 H 6 ALA L 84 GLN L 90 -1 O ALA L 84 N LEU L 104 SHEET 4 H 6 VAL L 33 GLN L 38 -1 N VAL L 34 O GLN L 89 SHEET 5 H 6 PRO L 44 TYR L 49 -1 N LYS L 45 O GLN L 37 SHEET 6 H 6 THR L 53 ARG L 54 -1 N THR L 53 O TYR L 49 SHEET 1 I 4 THR L 114 PHE L 118 0 SHEET 2 I 4 GLY L 129 PHE L 139 -1 O VAL L 133 N PHE L 118 SHEET 3 I 4 TYR L 173 THR L 182 -1 N TYR L 173 O PHE L 139 SHEET 4 I 4 VAL L 159 TRP L 163 -1 O LEU L 160 N THR L 178 SHEET 1 J 4 SER L 153 ARG L 155 0 SHEET 2 J 4 ILE L 144 ILE L 150 -1 O TRP L 148 N ARG L 155 SHEET 3 J 4 TYR L 192 HIS L 198 -1 N THR L 193 O LYS L 149 SHEET 4 J 4 ILE L 205 PHE L 209 -1 O ILE L 205 N ALA L 196 SHEET 1 K 4 GLN H 3 GLN H 6 0 SHEET 2 K 4 VAL H 18 SER H 25 -1 N LYS H 23 O VAL H 5 SHEET 3 K 4 THR H 77 ILE H 82 -1 N ALA H 78 O CYS H 22 SHEET 4 K 4 PHE H 67 GLU H 72 -1 N ALA H 68 O GLN H 81 SHEET 1 L 5 PRO H 57 TYR H 59 0 SHEET 2 L 5 GLY H 44 ILE H 51 -1 O TRP H 50 N THR H 58 SHEET 3 L 5 MET H 34 ALA H 40 -1 O MET H 34 N ILE H 51 SHEET 4 L 5 ALA H 88 GLY H 95 -1 O THR H 89 N GLN H 39 SHEET 1 M 6 PRO H 57 TYR H 59 0 SHEET 2 M 6 GLY H 44 ILE H 51 -1 O TRP H 50 N THR H 58 SHEET 3 M 6 MET H 34 ALA H 40 -1 O MET H 34 N ILE H 51 SHEET 4 M 6 ALA H 88 GLY H 95 -1 O THR H 89 N GLN H 39 SHEET 5 M 6 THR H 107 VAL H 111 -1 O THR H 107 N PHE H 90 SHEET 6 M 6 GLU H 10 LYS H 12 1 O GLU H 10 N THR H 110 SHEET 1 N 4 SER H 120 LEU H 124 0 SHEET 2 N 4 SER H 137 TYR H 147 -1 O GLY H 141 N LEU H 124 SHEET 3 N 4 LEU H 184 THR H 194 -1 N TYR H 185 O TYR H 147 SHEET 4 N 4 VAL H 171 THR H 173 -1 N HIS H 172 O SER H 190 SHEET 1 O 4 SER H 120 LEU H 124 0 SHEET 2 O 4 SER H 137 TYR H 147 -1 O GLY H 141 N LEU H 124 SHEET 3 O 4 LEU H 184 THR H 194 -1 N TYR H 185 O TYR H 147 SHEET 4 O 4 VAL H 177 GLN H 179 -1 O VAL H 177 N THR H 186 SHEET 1 P 3 THR H 153 TRP H 157 0 SHEET 2 P 3 THR H 206 HIS H 212 -1 N ASN H 209 O THR H 156 SHEET 3 P 3 THR H 217 LYS H 222 -1 N THR H 217 O HIS H 212
SSBOND 1 CYS N 92 CYS N 417 1555 1555 2.01 SSBOND 2 CYS N 124 CYS N 129 1555 1555 2.01 SSBOND 3 CYS N 175 CYS N 193 1555 1555 2.00 SSBOND 4 CYS N 183 CYS N 230 1555 1555 2.00 SSBOND 5 CYS N 232 CYS N 237 1555 1555 2.02 SSBOND 6 CYS N 278 CYS N 291 1555 1555 2.01 SSBOND 7 CYS N 280 CYS N 289 1555 1555 2.02 SSBOND 8 CYS N 318 CYS N 337 1555 1555 1.98 SSBOND 9 CYS N 421 CYS N 447 1555 1555 2.01 SSBOND 10 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 11 CYS L 134 CYS L 194 1555 1555 2.02 SSBOND 12 CYS L 214 CYS H 128 1555 1555 2.02 SSBOND 13 CYS H 22 CYS H 92 1555 1555 1.98 SSBOND 14 CYS H 142 CYS H 208 1555 1555 2.02
LINK ND2 ASN N 86 C1 NAG N 475A 1555 1555 1.45 LINK ND2 ASN N 146 C1 NAG N 476A 1555 1555 1.43 LINK ND2 ASN N 200 C1 NAG N 469A 1555 1555 1.47 LINK O4 NAG N 469A C1 NAG N 470B 1555 1555 1.44 LINK O4 NAG N 470B C1 BMA N 471C 1555 1555 1.42 LINK O3 BMA N 471C C1 MAN N 472D 1555 1555 1.42 LINK O2 MAN N 472D C1 MAN N 473E 1555 1555 1.42 LINK O2 MAN N 473E C1 MAN N 474F 1555 1555 1.44 LINK CA CA N 1 O ASN N 347 1555 1555 3.01 LINK CA CA N 1 OD2 ASP N 324 1555 1555 1.68 LINK CA CA N 1 O GLY N 297 1555 1555 1.66 LINK CA CA N 1 O ASP N 293 1555 1555 2.03
CISPEP 1 ASN N 325 PRO N 326 0 0.25 CISPEP 2 ARG N 430 PRO N 431 0 -1.21 CISPEP 3 SER L 7 PRO L 8 0 1.67 CISPEP 4 PRO L 94 PRO L 95 0 -23.35 CISPEP 5 TYR L 140 PRO L 141 0 -1.70 CISPEP 6 PHE H 148 PRO H 149 0 -7.86 CISPEP 7 GLU H 150 PRO H 151 0 25.69 CISPEP 8 TRP H 199 PRO H 200 0 7.04
SITE 1 AC1 7 HOH N 72 ASN N 199 ASN N 200 LEU N 453 SITE 2 AC1 7 GLY N 454 GLN N 455 NAG N 470B SITE 1 AC2 6 HOH N 32 GLN N 392 GLY N 394 PHE N 452 SITE 2 AC2 6 NAG N 469A BMA N 471C SITE 1 AC3 6 HOH N 69 LEU N 377 THR N 391 GLY N 394 SITE 2 AC3 6 NAG N 470B MAN N 472D SITE 1 AC4 5 ARG N 364 GLU N 375 BMA N 471C MAN N 473E SITE 2 AC4 5 MAN N 474F SITE 1 AC5 5 ASP N 330 LYS N 389 PRO N 390 MAN N 472D SITE 2 AC5 5 MAN N 474F SITE 1 AC6 8 ARG N 327 ASN N 329 ASP N 330 ARG N 364 SITE 2 AC6 8 ILE N 366 ILE N 368 MAN N 472D MAN N 473E SITE 1 AC7 3 ASN N 86 HIS N 233 ASN N 234 SITE 1 AC8 1 ASN N 146 SITE 1 AC9 4 ASP N 293 GLY N 297 ASP N 324 ASN N 347
CRYST1 167.000 167.000 124.000 90.00 90.00 90.00 P 4 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.005988 0.000000 0.000000 0.00000
SCALE2 0.000000 0.005988 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008065 0.00000