10 20 30 40 50 60 70 80 1NAR - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PLANT SEED PROTEIN 10-SEP-93 1NAR
TITLE CRYSTAL STRUCTURE OF NARBONIN REFINED AT 1.8 ANGSTROMS TITLE 2 RESOLUTION
COMPND MOL_ID: 1; COMPND 2 MOLECULE: NARBONIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VICIA NARBONENSIS; SOURCE 3 ORGANISM_TAXID: 3912
KEYWDS PLANT SEED PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR M.HENNIG,B.SCHLESIER,K.S.WILSON
REVDAT 2 24-FEB-09 1NAR 1 VERSN REVDAT 1 31-JAN-94 1NAR 0
JRNL AUTH M.HENNIG,S.PFEFFER-HENNIG,Z.DAUTER,K.S.WILSON, JRNL AUTH 2 B.SCHLESIER,V.H.NONG JRNL TITL CRYSTAL STRUCTURE OF NARBONIN AT 1.8 A RESOLUTION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 51 177 1995 JRNL REFN ISSN 0907-4449 JRNL PMID 15299319 JRNL DOI 10.1107/S0907444994009807
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.HENNIG,B.SCHLESIER,Z.DAUTER,S.PFEFFER,C.BETZEL, REMARK 1 AUTH 2 W.E.HOEHNE,K.S.WILSON REMARK 1 TITL A TIM BARREL PROTEIN WITHOUT ENZYMATIC ACTIVITY? REMARK 1 TITL 2 CRYSTAL STRUCTURE OF NARBONIN AT 1.8 ANGSTROMS REMARK 1 TITL 3 RESOLUTION REMARK 1 REF FEBS LETT. V. 306 80 1992 REMARK 1 REFN ISSN 0014-5793 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.HENNIG,B.SCHLESIER,S.PFEFFER,W.E.HOEHNE REMARK 1 TITL NARBONIN, A 2S GLOBULIN FROM VICIA NARBONENSIS L. REMARK 1 TITL 2 CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC REMARK 1 TITL 3 DATA REMARK 1 REF J.MOL.BIOL. V. 215 339 1990 REMARK 1 REFN ISSN 0022-2836
REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 27227 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2333 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 513 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.015 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.046 ; 0.040 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.088 ; 0.050 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.014 ; 0.020 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.175 ; 0.150 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.173 ; 0.300 REMARK 3 MULTIPLE TORSION (A) : 0.268 ; 0.300 REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : 0.230 ; 0.300 REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 17.540; 3.000 REMARK 3 STAGGERED (DEGREES) : 16.980; 15.000 REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.835 ; 1.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.433 ; 1.400 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.214 ; 2.100 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.384 ; 2.100 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1NAR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.75000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 290
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 1 O HOH A 575 1.66 REMARK 500 O LEU A 230 O HOH A 502 2.15 REMARK 500 CB ASP A 119 O HOH A 699 2.16 REMARK 500 OD2 ASP A 125 O HOH A 686 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 2 N LYS A 2 CA -0.142 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 2 C - N - CA ANGL. DEV. = 26.5 DEGREES REMARK 500 HIS A 19 N - CA - CB ANGL. DEV. = 13.0 DEGREES REMARK 500 HIS A 19 CA - CB - CG ANGL. DEV. = -12.1 DEGREES REMARK 500 ASP A 20 CB - CG - OD1 ANGL. DEV. = 9.2 DEGREES REMARK 500 GLU A 24 CB - CA - C ANGL. DEV. = -12.0 DEGREES REMARK 500 GLU A 29 CB - CG - CD ANGL. DEV. = 23.1 DEGREES REMARK 500 PHE A 39 N - CA - CB ANGL. DEV. = 13.0 DEGREES REMARK 500 PHE A 39 C - N - CA ANGL. DEV. = 23.1 DEGREES REMARK 500 ILE A 41 N - CA - CB ANGL. DEV. = -18.8 DEGREES REMARK 500 ARG A 73 CB - CG - CD ANGL. DEV. = 19.5 DEGREES REMARK 500 ARG A 73 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 74 CG - CD - NE ANGL. DEV. = 36.6 DEGREES REMARK 500 ARG A 74 CD - NE - CZ ANGL. DEV. = 10.6 DEGREES REMARK 500 ARG A 74 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 87 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 GLU A 98 OE1 - CD - OE2 ANGL. DEV. = 7.3 DEGREES REMARK 500 ASP A 118 CB - CG - OD2 ANGL. DEV. = 7.6 DEGREES REMARK 500 ARG A 135 CD - NE - CZ ANGL. DEV. = 8.6 DEGREES REMARK 500 PRO A 139 N - CD - CG ANGL. DEV. = 7.9 DEGREES REMARK 500 GLU A 138 O - C - N ANGL. DEV. = 12.9 DEGREES REMARK 500 PRO A 139 C - N - CA ANGL. DEV. = 20.3 DEGREES REMARK 500 MET A 144 CG - SD - CE ANGL. DEV. = 13.3 DEGREES REMARK 500 GLU A 207 CA - CB - CG ANGL. DEV. = 47.2 DEGREES REMARK 500 ASP A 228 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP A 261 N - CA - CB ANGL. DEV. = 13.4 DEGREES REMARK 500 TRP A 261 CA - C - N ANGL. DEV. = 26.5 DEGREES REMARK 500 TRP A 261 O - C - N ANGL. DEV. = -18.7 DEGREES REMARK 500 ASP A 265 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 LEU A 286 CA - CB - CG ANGL. DEV. = 22.4 DEGREES REMARK 500 ALA A 288 CB - CA - C ANGL. DEV. = 9.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 94 81.64 -167.26 REMARK 500 PRO A 139 1.91 -69.86 REMARK 500 ASN A 158 61.11 -119.96 REMARK 500 TYR A 216 -99.53 -110.43 REMARK 500 ALA A 288 -82.53 -82.83 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 572 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH A 602 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH A 608 DISTANCE = 6.48 ANGSTROMS REMARK 525 HOH A 628 DISTANCE = 7.12 ANGSTROMS REMARK 525 HOH A 653 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH A 654 DISTANCE = 7.07 ANGSTROMS REMARK 525 HOH A 676 DISTANCE = 8.18 ANGSTROMS REMARK 525 HOH A 682 DISTANCE = 6.71 ANGSTROMS REMARK 525 HOH A 692 DISTANCE = 5.66 ANGSTROMS REMARK 525 HOH A 695 DISTANCE = 6.87 ANGSTROMS REMARK 525 HOH A 716 DISTANCE = 8.10 ANGSTROMS REMARK 525 HOH A 717 DISTANCE = 6.86 ANGSTROMS REMARK 525 HOH A 720 DISTANCE = 7.07 ANGSTROMS REMARK 525 HOH A 729 DISTANCE = 7.33 ANGSTROMS REMARK 525 HOH A 758 DISTANCE = 6.44 ANGSTROMS REMARK 525 HOH A 797 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH A 799 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH A 800 DISTANCE = 6.11 ANGSTROMS
REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET PRESENTED AS *A* ON SHEET RECORDS BELOW IS REMARK 700 ACTUALLY AN EIGHT-STRANDED BETA-BARREL. THIS IS REMARK 700 REPRESENTED BY A NINE-STRANDED SHEET IN WHICH THE FIRST REMARK 700 AND LAST STRANDS ARE IDENTICAL.
REMARK 999 REMARK 999 SEQUENCE REMARK 999 REMARK 999 THE AMINO ACID SEQUENCE WAS DETERMINED BY INTERPRETATION REMARK 999 OF THE ELECTRON DENSITY (REF. 1). FOR FINAL REFINEMENT THE REMARK 999 SEQUENCE WAS CORRECTED AT SEVERAL POSITIONS USING CDNA AND REMARK 999 GENOMIC SEQUENCE: SEQUENCE ENTRIES XEMBL: VNNAF6NB, REMARK 999 VNNAG2NB, VNNAN21NB.
DBREF 1NAR A 1 290 UNP Q08884 Q08884_VICNA 2 291
SEQADV 1NAR ALA A 289 UNP Q08884 LYS 290 CONFLICT
SEQRES 1 A 290 PRO LYS PRO ILE PHE ARG GLU TYR ILE GLY VAL LYS PRO SEQRES 2 A 290 ASN SER THR THR LEU HIS ASP PHE PRO THR GLU ILE ILE SEQRES 3 A 290 ASN THR GLU THR LEU GLU PHE HIS TYR ILE LEU GLY PHE SEQRES 4 A 290 ALA ILE GLU SER TYR TYR GLU SER GLY LYS GLY THR GLY SEQRES 5 A 290 THR PHE GLU GLU SER TRP ASP VAL GLU LEU PHE GLY PRO SEQRES 6 A 290 GLU LYS VAL LYS ASN LEU LYS ARG ARG HIS PRO GLU VAL SEQRES 7 A 290 LYS VAL VAL ILE SER ILE GLY GLY ARG GLY VAL ASN THR SEQRES 8 A 290 PRO PHE ASP PRO ALA GLU GLU ASN VAL TRP VAL SER ASN SEQRES 9 A 290 ALA LYS GLU SER LEU LYS LEU ILE ILE GLN LYS TYR SER SEQRES 10 A 290 ASP ASP SER GLY ASN LEU ILE ASP GLY ILE ASP ILE HIS SEQRES 11 A 290 TYR GLU HIS ILE ARG SER ASP GLU PRO PHE ALA THR LEU SEQRES 12 A 290 MET GLY GLN LEU ILE THR GLU LEU LYS LYS ASP ASP ASP SEQRES 13 A 290 LEU ASN ILE ASN VAL VAL SER ILE ALA PRO SER GLU ASN SEQRES 14 A 290 ASN SER SER HIS TYR GLN LYS LEU TYR ASN ALA LYS LYS SEQRES 15 A 290 ASP TYR ILE ASN TRP VAL ASP TYR GLN PHE SER ASN GLN SEQRES 16 A 290 GLN LYS PRO VAL SER THR ASP ASP ALA PHE VAL GLU ILE SEQRES 17 A 290 PHE LYS SER LEU GLU LYS ASP TYR HIS PRO HIS LYS VAL SEQRES 18 A 290 LEU PRO GLY PHE SER THR ASP PRO LEU ASP THR LYS HIS SEQRES 19 A 290 ASN LYS ILE THR ARG ASP ILE PHE ILE GLY GLY CYS THR SEQRES 20 A 290 ARG LEU VAL GLN THR PHE SER LEU PRO GLY VAL PHE PHE SEQRES 21 A 290 TRP ASN ALA ASN ASP SER VAL ILE PRO LYS ARG ASP GLY SEQRES 22 A 290 ASP LYS PRO PHE ILE VAL GLU LEU THR LEU GLN GLN LEU SEQRES 23 A 290 LEU ALA ALA ARG
FORMUL 2 HOH *513(H2 O)
HELIX 1 1 PRO A 65 ARG A 74 1 10 HELIX 2 2 TRP A 101 LYS A 115 1 15 HELIX 3 3 PHE A 140 LYS A 153 1 14 HELIX 4 4 SER A 171 ALA A 180 1 10 HELIX 5 5 ASP A 202 ASP A 215 1 14 HELIX 6 6 PRO A 229 HIS A 234 5 6 HELIX 7 7 ARG A 239 GLN A 251 1 13 HELIX 8 8 ALA A 263 SER A 266 5 4 HELIX 9 9 ILE A 278 ALA A 288 1 11
SHEET 1 A 9 ILE A 4 ILE A 9 0 SHEET 2 A 9 GLU A 32 LEU A 37 1 SHEET 3 A 9 LYS A 79 GLY A 86 1 SHEET 4 A 9 GLY A 126 TYR A 131 1 SHEET 5 A 9 VAL A 161 ILE A 164 1 SHEET 6 A 9 TRP A 187 GLN A 191 1 SHEET 7 A 9 VAL A 221 SER A 226 1 SHEET 8 A 9 GLY A 257 TRP A 261 1 SHEET 9 A 9 ILE A 4 ILE A 9 1 SHEET 1 B 2 GLY A 38 TYR A 44 0 SHEET 2 B 2 GLY A 50 GLU A 56 -1 SHEET 1 C 2 SER A 117 ASP A 118 0 SHEET 2 C 2 GLY A 121 ASN A 122 -1
CISPEP 1 GLY A 38 PHE A 39 0 9.34 CISPEP 2 GLU A 138 PRO A 139 0 -0.81 CISPEP 3 TRP A 261 ASN A 262 0 12.67
CRYST1 46.900 75.500 50.900 90.00 120.50 90.00 P 1 21 1 2
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.021322 0.000000 0.012560 0.00000
SCALE2 0.000000 0.013245 0.000000 0.00000
SCALE3 0.000000 0.000000 0.022801 0.00000